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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8027O04.5
        

               
Conread position:
               
1-110
               

               
Cow position:
               
chr10:31022591-31022482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-165
               

               
Cow position:
               
chr10:12668733-12668899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
109, 14
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr10:41654605-41654790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
132, 111
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr10:54127858-54128056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
109, 153
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr10:14806175-14806380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
105, 130
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr10:51085808-51086027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
105, 207
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr10:11109365-11109135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
106, 203
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr10:37108693-37108918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
19, 23
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr10:58095737-58095486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
62, 135
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr10:55095572-55095835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
110, 197
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr10:12546289-12546555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
109, 203
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr10:58599828-58600092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
109, 171
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr10:22619103-22618802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
109, 133
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr10:46240189-46240499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 182
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr10:57479358-57479060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
126, 6
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr10:13851448-13851762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
109, 203
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr10:19493650-19493345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
109, 203
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr10:48745509-48745196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 175
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr10:31540670-31540984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
19, 23
               

               
Conread position:
               
1-367
               

               
Cow position:
               
chr10:53173016-53172640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 203
               

               
Conread position:
               
1-372
               

               
Cow position:
               
chr10:5868250-5867878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
88, 79
               

               
Conread position:
               
1-372
               

               
Cow position:
               
chr10:15488849-15489222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 38
               

               
Conread position:
               
1-381
               

               
Cow position:
               
chr10:20268390-20268001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
108, 212
               

               
Conread position:
               
1-388
               

               
Cow position:
               
chr10:31738416-31738798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
110, 151
               

               
Conread position:
               
1-391
               

               
Cow position:
               
chr10:32280151-32280551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 360
               

               
Conread position:
               
1-395
               

               
Cow position:
               
chr10:17958386-17958791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 203
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr10:31855784-31856214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 203
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr10:14854927-14855340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 214
               

               
Conread position:
               
1-429
               

               
Cow position:
               
chr10:6287051-6287485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 203
               

               
Conread position:
               
1-438
               

               
Cow position:
               
chr10:16797007-16797446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
132, 111
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr10:53319949-53319516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
19, 23
               

               
Conread position:
               
1-469
               

               
Cow position:
               
chr10:38343066-38342582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 365
               

               
Conread position:
               
1-470
               

               
Cow position:
               
chr10:29107471-29107007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 51
               

               
Conread position:
               
1-480
               

               
Cow position:
               
chr10:4560259-4559795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
134, 74
               

               
Conread position:
               
1-480
               

               
Cow position:
               
chr10:7896177-7895691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 111
               

               
Conread position:
               
1-495
               

               
Cow position:
               
chr10:31045236-31044770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 63
               

               
Conread position:
               
1-499
               

               
Cow position:
               
chr10:2118722-2118214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 207
               

               
Conread position:
               
1-500
               

               
Cow position:
               
chr10:41149417-41148930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 38
               

               
Conread position:
               
1-511
               

               
Cow position:
               
chr10:20374112-20373610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
52, 72
               

               
Conread position:
               
1-517
               

               
Cow position:
               
chr10:15831764-15831250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 111
               

               
Conread position:
               
1-527
               

               
Cow position:
               
chr10:24294974-24294461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 71
               

               
Conread position:
               
1-538
               

               
Cow position:
               
chr10:40399396-40399912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
121, 149
               

               
Conread position:
               
1-538
               

               
Cow position:
               
chr10:53318483-53317940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 35
               

               
Conread position:
               
1-571
               

               
Cow position:
               
chr10:63625367-63625944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 116
               

               
Conread position:
               
1-579
               

               
Cow position:
               
chr10:3287814-3287243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
109, 133
               

               
Conread position:
               
1-591
               

               
Cow position:
               
chr10:38543606-38543027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 131
               

               
Conread position:
               
1-619
               

               
Cow position:
               
chr10:35023968-35024575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 307
               

               
Conread position:
               
1-641
               

               
Cow position:
               
chr10:46762513-46763154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
650
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 71
               

               
Conread position:
               
1-650
               

               
Cow position:
               
chr10:21516705-21516054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
657
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 404
               

               
Conread position:
               
1-651
               

               
Cow position:
               
chr10:42115560-42116199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
658
               

               
Alignm identity:
               
460
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 134
               

               
Conread position:
               
1-700
               

               
Cow position:
               
chr10:21897342-21896639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
491
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 99
               

               
Conread position:
               
1-703
               

               
Cow position:
               
chr10:36467555-36466846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
715
               

               
Alignm identity:
               
520
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 479
               

               
Conread position:
               
1-705
               

               
Cow position:
               
chr10:39877135-39876431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
715
               

               
Alignm identity:
               
476
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 178
               

               
Conread position:
               
1-710
               

               
Cow position:
               
chr10:40642245-40642961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
727
               

               
Alignm identity:
               
509
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 190
               

               
Conread position:
               
1-713
               

               
Cow position:
               
chr10:22574523-22573834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
726
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 41
               

               
Conread position:
               
1-713
               

               
Cow position:
               
chr10:32318763-32319453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
720
               

               
Alignm identity:
               
487
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 52
               

               
Conread position:
               
1-713
               

               
Cow position:
               
chr10:39776693-39775982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
723
               

               
Alignm identity:
               
488
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 84
               

               
Conread position:
               
1-715
               

               
Cow position:
               
chr10:19142306-19141583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
495
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 149
               

               
Conread position:
               
1-715
               

               
Cow position:
               
chr10:40149845-40149139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
727
               

               
Alignm identity:
               
496
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 110
               

               
Conread position:
               
1-716
               

               
Cow position:
               
chr10:6003264-6002577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
722
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 136
               

               
Conread position:
               
1-716
               

               
Cow position:
               
chr10:20936556-20935840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
725
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
198, 108
               

               
Conread position:
               
1-716
               

               
Cow position:
               
chr10:23907830-23908537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
740
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
112, 148
               

               
Conread position:
               
1-716
               

               
Cow position:
               
chr10:24309890-24309187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
727
               

               
Alignm identity:
               
526
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 220
               

               
Conread position:
               
1-716
               

               
Cow position:
               
chr10:30683178-30682465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
494
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 74
               

               
Conread position:
               
1-716
               

               
Cow position:
               
chr10:48169836-48170548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
726
               

               
Alignm identity:
               
497
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 80
               

               
Conread position:
               
1-717
               

               
Cow position:
               
chr10:279055-278327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
737
               

               
Alignm identity:
               
510
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 210
               

               
Conread position:
               
1-717
               

               
Cow position:
               
chr10:22645364-22646056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
724
               

               
Alignm identity:
               
487
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
347, 135
               

               
Conread position:
               
1-717
               

               
Cow position:
               
chr10:30688292-30689027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
741
               

               
Alignm identity:
               
506
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 56
               

               
Conread position:
               
1-717
               

               
Cow position:
               
chr10:39849937-39849197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
746
               

               
Alignm identity:
               
495
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 218
               

               
Conread position:
               
1-717
               

               
Cow position:
               
chr10:41140706-41139992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
491
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 38
               

               
Conread position:
               
1-717
               

               
Cow position:
               
chr10:51781131-51780414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
736
               

               
Alignm identity:
               
514
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 32
               

               
Conread position:
               
1-717
               

               
Cow position:
               
chr10:57297344-57296646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
729
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
330, 85
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr10:1663656-1662938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
727
               

               
Alignm identity:
               
495
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 151
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr10:4500268-4500981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
736
               

               
Alignm identity:
               
504
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 100
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr10:8292435-8293159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
513
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 111
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr10:10584437-10585159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
495
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 169
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr10:12102080-12101341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
750
               

               
Alignm identity:
               
551
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 133
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr10:14333540-14332812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
508
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 203
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr10:14845575-14846286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
723
               

               
Alignm identity:
               
472
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 25
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr10:14865170-14865884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
744
               

               
Alignm identity:
               
493
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 53
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr10:15621079-15620357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
729
               

               
Alignm identity:
               
507
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 23
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr10:16928468-16929187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
502
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 103
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr10:19513537-19514259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
503
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 41
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr10:19543121-19542416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
726
               

               
Alignm identity:
               
480
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 94
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr10:19841991-19842700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
725
               

               
Alignm identity:
               
492
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 93
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr10:20381646-20380959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
488
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 68
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr10:21080168-21080866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
519
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 237
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr10:21426997-21426274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
496
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 121
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr10:21450891-21450170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
487
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 43
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr10:21489252-21489967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
499
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 122
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr10:22103803-22104509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
724
               

               
Alignm identity:
               
485
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 36
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr10:22343774-22344493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
737
               

               
Alignm identity:
               
504
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 71
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr10:23848267-23848995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
504
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 203
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr10:25255068-25255789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
742
               

               
Alignm identity:
               
490
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 37
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr10:25340458-25341177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
734
               

               
Alignm identity:
               
495
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 201
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr10:25564248-25563525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
508
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 134
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr10:25651108-25650391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
725
               

               
Alignm identity:
               
497
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 38
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr10:26293184-26292459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
506
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 203
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr10:28529093-28528389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 137
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr10:29629955-29629239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
495
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 93
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr10:30718997-30719724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
503
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 111
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr10:31526041-31526739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
486
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 33
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr10:32085991-32086717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
733
               

               
Alignm identity:
               
507
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 143
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr10:32364245-32364968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
498
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 149
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr10:32703067-32703791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
729
               

               
Alignm identity:
               
502
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 397
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr10:33868874-33868155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
497
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 33
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr10:34665431-34664740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
727
               

               
Alignm identity:
               
483
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
330, 108
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr10:37772197-37772908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
724
               

               
Alignm identity:
               
495
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 111
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr10:38723579-38724298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
727
               

               
Alignm identity:
               
547
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 157
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr10:38842468-38843192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
510
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 203
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr10:39038751-39038022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
738
               

               
Alignm identity:
               
514
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 111
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr10:39210065-39210802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
741
               

               
Alignm identity:
               
509
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 203
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr10:39440466-39441199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
740
               

               
Alignm identity:
               
494
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 111
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr10:39814090-39813361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
733
               

               
Alignm identity:
               
501
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 203
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr10:40348352-40347629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
729
               

               
Alignm identity:
               
495
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 203
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr10:41159726-41160444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
727
               

               
Alignm identity:
               
518
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 111
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr10:41569413-41570133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
726
               

               
Alignm identity:
               
500
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 111
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr10:47908927-47909646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
726
               

               
Alignm identity:
               
499
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 111
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr10:48375142-48374416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
500
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 203
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr10:50018055-50017333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
729
               

               
Alignm identity:
               
497
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 112
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr10:50313937-50314663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
486
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 404
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr10:51950792-51950073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
729
               

               
Alignm identity:
               
497
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 111
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr10:52827307-52826598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
725
               

               
Alignm identity:
               
501
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 54
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr10:57555034-57554306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
502
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 203
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr10:57987398-57986666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
735
               

               
Alignm identity:
               
517
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 202
               

               
Conread position:
               
1-720
               

               
Cow position:
               
chr10:41879241-41879970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
734
               

               
Alignm identity:
               
508
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 203
               

               
Conread position:
               
2-158
               

               
Cow position:
               
chr10:42633219-42633378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
108, 55
               

               
Conread position:
               
2-718
               

               
Cow position:
               
chr10:20368831-20368147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
489
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 13
               

               
Conread position:
               
2-718
               

               
Cow position:
               
chr10:62406463-62405742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
504
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 61
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr10:6536031-6536239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
3-227
               

               
Cow position:
               
chr10:28947771-28947998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
96, 130
               

               
Conread position:
               
3-303
               

               
Cow position:
               
chr10:37127478-37127166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
107, 131
               

               
Conread position:
               
3-309
               

               
Cow position:
               
chr10:42274882-42275179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
148, 57
               

               
Conread position:
               
3-342
               

               
Cow position:
               
chr10:42335316-42334983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 194
               

               
Conread position:
               
3-491
               

               
Cow position:
               
chr10:28604131-28604621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
225, 109
               

               
Conread position:
               
3-495
               

               
Cow position:
               
chr10:16552971-16552471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
110, 68
               

               
Conread position:
               
3-546
               

               
Cow position:
               
chr10:36445328-36444810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 55
               

               
Conread position:
               
3-703
               

               
Cow position:
               
chr10:18022364-18023033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
706
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 83
               

               
Conread position:
               
3-718
               

               
Cow position:
               
chr10:1379807-1380526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
506
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 66
               

               
Conread position:
               
3-718
               

               
Cow position:
               
chr10:28147726-28147006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 140
               

               
Conread position:
               
3-718
               

               
Cow position:
               
chr10:33425241-33424526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
733
               

               
Alignm identity:
               
497
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 137
               

               
Conread position:
               
3-718
               

               
Cow position:
               
chr10:35825037-35824314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
495
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 438
               

               
Conread position:
               
3-718
               

               
Cow position:
               
chr10:41386679-41385957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
743
               

               
Alignm identity:
               
478
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 212
               

               
Conread position:
               
3-718
               

               
Cow position:
               
chr10:44670355-44669635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
739
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 48
               

               
Conread position:
               
4-310
               

               
Cow position:
               
chr10:38850565-38850872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
76, 24
               

               
Conread position:
               
4-480
               

               
Cow position:
               
chr10:59465939-59465461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
84, 246
               

               
Conread position:
               
4-715
               

               
Cow position:
               
chr10:50554289-50553601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
720
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
16, 23
               

               
Conread position:
               
4-716
               

               
Cow position:
               
chr10:25263869-25264550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
718
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
327, 105
               

               
Conread position:
               
6-660
               

               
Cow position:
               
chr10:24100771-24100125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
668
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
14, 24
               

               
Conread position:
               
8-593
               

               
Cow position:
               
chr10:24975520-24974939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 44
               

               
Conread position:
               
8-608
               

               
Cow position:
               
chr10:44103447-44104055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
26, 134
               

               
Conread position:
               
9-233
               

               
Cow position:
               
chr10:53980621-53980395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
101, 163
               

               
Conread position:
               
9-648
               

               
Cow position:
               
chr10:8324819-8324181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
647
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 302
               

               
Conread position:
               
15-526
               

               
Cow position:
               
chr10:68097297-68096778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 189
               

               
Conread position:
               
16-718
               

               
Cow position:
               
chr10:44706390-44705678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
717
               

               
Alignm identity:
               
490
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 134
               

               
Conread position:
               
17-294
               

               
Cow position:
               
chr10:61133462-61133744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
96, 9
               

               
Conread position:
               
22-544
               

               
Cow position:
               
chr10:27786932-27787462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
60, 167
               

               
Conread position:
               
22-718
               

               
Cow position:
               
chr10:7279772-7279072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
702
               

               
Alignm identity:
               
483
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 178
               

               
Conread position:
               
22-718
               

               
Cow position:
               
chr10:54929645-54928924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
486
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 33
               

               
Conread position:
               
23-522
               

               
Cow position:
               
chr10:19608013-19607524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
144, 25
               

               
Conread position:
               
25-571
               

               
Cow position:
               
chr10:32559505-32560028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
85, 168
               

               
Conread position:
               
29-188
               

               
Cow position:
               
chr10:46193458-46193616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
30-666
               

               
Cow position:
               
chr10:20538641-20539286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
659
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 75
               

               
Conread position:
               
31-718
               

               
Cow position:
               
chr10:51557731-51558429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
703
               

               
Alignm identity:
               
489
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 173
               

               
Conread position:
               
32-294
               

               
Cow position:
               
chr10:42390749-42390496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
190, 82
               

               
Conread position:
               
32-367
               

               
Cow position:
               
chr10:6255115-6254787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
311, 77
               

               
Conread position:
               
33-264
               

               
Cow position:
               
chr10:41635718-41635955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
34-487
               

               
Cow position:
               
chr10:34667686-34667245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 47
               

               
Conread position:
               
34-710
               

               
Cow position:
               
chr10:42743935-42744617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
689
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 113
               

               
Conread position:
               
35-718
               

               
Cow position:
               
chr10:24298155-24297474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
694
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 96
               

               
Conread position:
               
35-718
               

               
Cow position:
               
chr10:28031590-28030905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
695
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 169
               

               
Conread position:
               
38-376
               

               
Cow position:
               
chr10:2243304-2243643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
190, 161
               

               
Conread position:
               
41-705
               

               
Cow position:
               
chr10:18040332-18041011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
686
               

               
Alignm identity:
               
514
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 30
               

               
Conread position:
               
47-248
               

               
Cow position:
               
chr10:22907857-22907654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
65, 84
               

               
Conread position:
               
56-718
               

               
Cow position:
               
chr10:21738369-21737695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
678
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 148
               

               
Conread position:
               
57-718
               

               
Cow position:
               
chr10:32008436-32009105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
674
               

               
Alignm identity:
               
460
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 146
               

               
Conread position:
               
58-596
               

               
Cow position:
               
chr10:47156078-47156621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 146
               

               
Conread position:
               
64-256
               

               
Cow position:
               
chr10:37074531-37074344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
131, 45
               

               
Conread position:
               
64-622
               

               
Cow position:
               
chr10:47964718-47964172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
52, 164
               

               
Conread position:
               
65-599
               

               
Cow position:
               
chr10:65732744-65733273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
197, 47
               

               
Conread position:
               
70-649
               

               
Cow position:
               
chr10:2526089-2526657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 70
               

               
Conread position:
               
75-718
               

               
Cow position:
               
chr10:25004306-25004942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
652
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 56
               

               
Conread position:
               
88-718
               

               
Cow position:
               
chr10:8681012-8681653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 116
               

               
Conread position:
               
101-716
               

               
Cow position:
               
chr10:60704623-60704001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
65, 45
               

               
Conread position:
               
105-718
               

               
Cow position:
               
chr10:26670085-26670697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 69
               

               
Conread position:
               
106-715
               

               
Cow position:
               
chr10:46173780-46173164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 61
               

               
Conread position:
               
119-696
               

               
Cow position:
               
chr10:59841417-59840820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 24
               

               
Conread position:
               
126-541
               

               
Cow position:
               
chr10:28041445-28041021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 18
               

               
Conread position:
               
129-718
               

               
Cow position:
               
chr10:42642967-42643575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
130-709
               

               
Cow position:
               
chr10:2430088-2429497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 139
               

               
Conread position:
               
133-717
               

               
Cow position:
               
chr10:32580675-32581266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 67
               

               
Conread position:
               
134-703
               

               
Cow position:
               
chr10:24756619-24757177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 19
               

               
Conread position:
               
138-305
               

               
Cow position:
               
chr10:10049061-10048902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
91, 36
               

               
Conread position:
               
139-718
               

               
Cow position:
               
chr10:14806380-14806965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 61
               

               
Conread position:
               
140-595
               

               
Cow position:
               
chr10:27123103-27122654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 374
               

               
Conread position:
               
154-717
               

               
Cow position:
               
chr10:49430105-49430672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 47
               

               
Conread position:
               
156-525
               

               
Cow position:
               
chr10:39651017-39650648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
53, 47
               

               
Conread position:
               
156-718
               

               
Cow position:
               
chr10:19296937-19296375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 44
               

               
Conread position:
               
175-717
               

               
Cow position:
               
chr10:55099443-55098902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 157
               

               
Conread position:
               
177-680
               

               
Cow position:
               
chr10:55026343-55026832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
52, 116
               

               
Conread position:
               
178-351
               

               
Cow position:
               
chr10:46193821-46193995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
178-716
               

               
Cow position:
               
chr10:8458711-8459254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 22
               

               
Conread position:
               
178-717
               

               
Cow position:
               
chr10:55010299-55010837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 22
               

               
Conread position:
               
178-718
               

               
Cow position:
               
chr10:19720368-19719844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
51, 73
               

               
Conread position:
               
182-608
               

               
Cow position:
               
chr10:48657629-48657227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
16, 59
               

               
Conread position:
               
182-719
               

               
Cow position:
               
chr10:58686691-58687216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 79
               

               
Conread position:
               
187-696
               

               
Cow position:
               
chr10:41772953-41772462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 67
               

               
Conread position:
               
188-715
               

               
Cow position:
               
chr10:60362480-60363002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 113
               

               
Conread position:
               
203-718
               

               
Cow position:
               
chr10:25633330-25632808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 192
               

               
Conread position:
               
220-706
               

               
Cow position:
               
chr10:58811233-58810752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
61, 267
               

               
Conread position:
               
227-569
               

               
Cow position:
               
chr10:14948796-14949141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
107, 73
               

               
Conread position:
               
232-703
               

               
Cow position:
               
chr10:50519514-50519047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 75
               

               
Conread position:
               
235-718
               

               
Cow position:
               
chr10:32830183-32830669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 128
               

               
Conread position:
               
237-718
               

               
Cow position:
               
chr10:23411590-23412075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 16
               

               
Conread position:
               
238-673
               

               
Cow position:
               
chr10:22907589-22907142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 5
               

               
Conread position:
               
242-498
               

               
Cow position:
               
chr10:1974025-1973766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
32, 25
               

               
Conread position:
               
242-645
               

               
Cow position:
               
chr10:63812833-63812425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
98, 155
               

               
Conread position:
               
242-717
               

               
Cow position:
               
chr10:42635298-42635746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
332, 74
               

               
Conread position:
               
242-718
               

               
Cow position:
               
chr10:26931522-26932013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
105, 26
               

               
Conread position:
               
242-718
               

               
Cow position:
               
chr10:45647410-45647885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 64
               

               
Conread position:
               
244-718
               

               
Cow position:
               
chr10:40566233-40566709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 193
               

               
Conread position:
               
246-563
               

               
Cow position:
               
chr10:40419633-40419944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
12, 101
               

               
Conread position:
               
246-651
               

               
Cow position:
               
chr10:44723954-44723543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 148
               

               
Conread position:
               
246-679
               

               
Cow position:
               
chr10:37429003-37429438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 148
               

               
Conread position:
               
247-500
               

               
Cow position:
               
chr10:10146624-10146875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 13
               

               
Conread position:
               
247-638
               

               
Cow position:
               
chr10:41635980-41636367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 22
               

               
Conread position:
               
248-718
               

               
Cow position:
               
chr10:61294836-61294374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
28, 23
               

               
Conread position:
               
252-718
               

               
Cow position:
               
chr10:2847461-2847916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 100
               

               
Conread position:
               
254-716
               

               
Cow position:
               
chr10:17435853-17436296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
50, 65
               

               
Conread position:
               
255-716
               

               
Cow position:
               
chr10:20515479-20515940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 209
               

               
Conread position:
               
265-718
               

               
Cow position:
               
chr10:25755795-25756252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 350
               

               
Conread position:
               
269-662
               

               
Cow position:
               
chr10:3182103-3181709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
62, 133
               

               
Conread position:
               
270-718
               

               
Cow position:
               
chr10:10685894-10686343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
83, 36
               

               
Conread position:
               
270-718
               

               
Cow position:
               
chr10:53158193-53158646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 85
               

               
Conread position:
               
273-627
               

               
Cow position:
               
chr10:54128272-54128620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
71, 33
               

               
Conread position:
               
273-695
               

               
Cow position:
               
chr10:4183999-4183567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
275-627
               

               
Cow position:
               
chr10:23650107-23649749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
37, 70
               

               
Conread position:
               
276-596
               

               
Cow position:
               
chr10:27043590-27043255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
55, 69
               

               
Conread position:
               
278-718
               

               
Cow position:
               
chr10:53336928-53337355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
12, 23
               

               
Conread position:
               
280-690
               

               
Cow position:
               
chr10:41654380-41653971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 129
               

               
Conread position:
               
280-690
               

               
Cow position:
               
chr10:42389341-42388944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
8, 68
               

               
Conread position:
               
280-705
               

               
Cow position:
               
chr10:6541061-6541494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
10, 125
               

               
Conread position:
               
280-718
               

               
Cow position:
               
chr10:58939061-58938610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 101
               

               
Conread position:
               
281-718
               

               
Cow position:
               
chr10:58600215-58600634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
73, 25
               

               
Conread position:
               
286-595
               

               
Cow position:
               
chr10:46193960-46194266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 80
               

               
Conread position:
               
292-587
               

               
Cow position:
               
chr10:17544437-17544151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
13, 42
               

               
Conread position:
               
300-512
               

               
Cow position:
               
chr10:65133607-65133399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
14, 43
               

               
Conread position:
               
301-711
               

               
Cow position:
               
chr10:1721256-1720842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 17
               

               
Conread position:
               
303-527
               

               
Cow position:
               
chr10:63938236-63938456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
51, 18
               

               
Conread position:
               
303-696
               

               
Cow position:
               
chr10:20452703-20453095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 48
               

               
Conread position:
               
304-717
               

               
Cow position:
               
chr10:19893656-19894077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
34, 47
               

               
Conread position:
               
308-707
               

               
Cow position:
               
chr10:53484285-53483892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
17, 30
               

               
Conread position:
               
309-718
               

               
Cow position:
               
chr10:326140-325729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 17
               

               
Conread position:
               
318-718
               

               
Cow position:
               
chr10:14907887-14908288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
215, 80
               

               
Conread position:
               
320-487
               

               
Cow position:
               
chr10:49724069-49724233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
60, 25
               

               
Conread position:
               
325-715
               

               
Cow position:
               
chr10:39077133-39077512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
89, 30
               

               
Conread position:
               
332-718
               

               
Cow position:
               
chr10:40706159-40706528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
57, 33
               

               
Conread position:
               
332-718
               

               
Cow position:
               
chr10:46240713-46241065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 17
               

               
Conread position:
               
333-707
               

               
Cow position:
               
chr10:4996451-4996077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 15
               

               
Conread position:
               
335-718
               

               
Cow position:
               
chr10:317717-317345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
244, 19
               

               
Conread position:
               
337-527
               

               
Cow position:
               
chr10:40736130-40736319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
337-567
               

               
Cow position:
               
chr10:19492412-19492184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
337-651
               

               
Cow position:
               
chr10:128255-128570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
35, 12
               

               
Conread position:
               
337-652
               

               
Cow position:
               
chr10:61872369-61872054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 12
               

               
Conread position:
               
337-676
               

               
Cow position:
               
chr10:39443374-39443037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
36, 18
               

               
Conread position:
               
337-718
               

               
Cow position:
               
chr10:2117794-2117413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 12
               

               
Conread position:
               
337-718
               

               
Cow position:
               
chr10:2467228-2466862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 12
               

               
Conread position:
               
337-718
               

               
Cow position:
               
chr10:26923639-26923260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 14
               

               
Conread position:
               
337-718
               

               
Cow position:
               
chr10:31375756-31375383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
92, 12
               

               
Conread position:
               
337-718
               

               
Cow position:
               
chr10:40140608-40140213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 292
               

               
Conread position:
               
337-718
               

               
Cow position:
               
chr10:66773748-66773366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 18
               

               
Conread position:
               
341-648
               

               
Cow position:
               
chr10:22580094-22579793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 47
               

               
Conread position:
               
342-596
               

               
Cow position:
               
chr10:39467458-39467712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
32, 13
               

               
Conread position:
               
342-652
               

               
Cow position:
               
chr10:52047039-52047347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
211, 135
               

               
Conread position:
               
342-713
               

               
Cow position:
               
chr10:31541304-31541672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 13
               

               
Conread position:
               
343-718
               

               
Cow position:
               
chr10:5785582-5785205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 32
               

               
Conread position:
               
346-718
               

               
Cow position:
               
chr10:40698016-40697646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
237, 107
               

               
Conread position:
               
348-718
               

               
Cow position:
               
chr10:36275518-36275147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 41
               

               
Conread position:
               
351-718
               

               
Cow position:
               
chr10:9682507-9682139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 0
               

               
Conread position:
               
355-702
               

               
Cow position:
               
chr10:30745329-30745677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 0
               

               
Conread position:
               
355-717
               

               
Cow position:
               
chr10:922606-922259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
194, 76
               

               
Conread position:
               
356-717
               

               
Cow position:
               
chr10:10047865-10047514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 175
               

               
Conread position:
               
356-718
               

               
Cow position:
               
chr10:3507477-3507111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
357-716
               

               
Cow position:
               
chr10:4344487-4344129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 38
               

               
Conread position:
               
358-605
               

               
Cow position:
               
chr10:16553934-16554177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
30, 36
               

               
Conread position:
               
358-718
               

               
Cow position:
               
chr10:37126540-37126188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
359-718
               

               
Cow position:
               
chr10:32699336-32699694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 49
               

               
Conread position:
               
360-703
               

               
Cow position:
               
chr10:20102301-20101954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
360-718
               

               
Cow position:
               
chr10:37789324-37788970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 34
               

               
Conread position:
               
363-645
               

               
Cow position:
               
chr10:60205804-60206080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 72
               

               
Conread position:
               
364-716
               

               
Cow position:
               
chr10:37308810-37309159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
24, 185
               

               
Conread position:
               
369-678
               

               
Cow position:
               
chr10:21415325-21415019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
134, 39
               

               
Conread position:
               
371-648
               

               
Cow position:
               
chr10:48743747-48743480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
202, 172
               

               
Conread position:
               
371-716
               

               
Cow position:
               
chr10:37531119-37530774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 26
               

               
Conread position:
               
371-718
               

               
Cow position:
               
chr10:42334908-42334573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 36
               

               
Conread position:
               
379-718
               

               
Cow position:
               
chr10:11109974-11110313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
195, 63
               

               
Conread position:
               
380-718
               

               
Cow position:
               
chr10:17959055-17959394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 0
               

               
Conread position:
               
391-718
               

               
Cow position:
               
chr10:49144953-49145276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 200
               

               
Conread position:
               
393-647
               

               
Cow position:
               
chr10:64287610-64287353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 241
               

               
Conread position:
               
394-712
               

               
Cow position:
               
chr10:22564680-22565006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
30, 188
               

               
Conread position:
               
394-718
               

               
Cow position:
               
chr10:48161436-48161751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
22, 110
               

               
Conread position:
               
395-691
               

               
Cow position:
               
chr10:22618521-22618230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
61, 91
               

               
Conread position:
               
395-718
               

               
Cow position:
               
chr10:15489533-15489853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 203
               

               
Conread position:
               
395-718
               

               
Cow position:
               
chr10:17222076-17222401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
179, 0
               

               
Conread position:
               
395-718
               

               
Cow position:
               
chr10:32281719-32282043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 0
               

               
Conread position:
               
395-718
               

               
Cow position:
               
chr10:55973702-55974026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 234
               

               
Conread position:
               
396-534
               

               
Cow position:
               
chr10:1981706-1981570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
396-703
               

               
Cow position:
               
chr10:57742917-57743221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
5, 157
               

               
Conread position:
               
398-718
               

               
Cow position:
               
chr10:20267757-20267439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 115
               

               
Conread position:
               
402-650
               

               
Cow position:
               
chr10:42690160-42689911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
172, 0
               

               
Conread position:
               
411-716
               

               
Cow position:
               
chr10:8366006-8365705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
30, 20
               

               
Conread position:
               
412-713
               

               
Cow position:
               
chr10:31465036-31465327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
167, 42
               

               
Conread position:
               
412-718
               

               
Cow position:
               
chr10:19737834-19738130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
131, 24
               

               
Conread position:
               
412-718
               

               
Cow position:
               
chr10:21398498-21398192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 196
               

               
Conread position:
               
419-583
               

               
Cow position:
               
chr10:36448948-36449110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
92, 15
               

               
Conread position:
               
419-595
               

               
Cow position:
               
chr10:14937740-14937563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
419-718
               

               
Cow position:
               
chr10:7858598-7858301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
114, 118
               

               
Conread position:
               
419-718
               

               
Cow position:
               
chr10:34335768-34335468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
420-717
               

               
Cow position:
               
chr10:26765279-26765576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 276
               

               
Conread position:
               
421-651
               

               
Cow position:
               
chr10:29755883-29755661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
116, 13
               

               
Conread position:
               
422-718
               

               
Cow position:
               
chr10:61312234-61312522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
17, 9
               

               
Conread position:
               
426-705
               

               
Cow position:
               
chr10:54140732-54141014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
427-718
               

               
Cow position:
               
chr10:38940859-38941148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 16
               

               
Conread position:
               
428-718
               

               
Cow position:
               
chr10:22380456-22380746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
148, 44
               

               
Conread position:
               
431-716
               

               
Cow position:
               
chr10:10531972-10531686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
47, 262
               

               
Conread position:
               
436-718
               

               
Cow position:
               
chr10:2243638-2243921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
436-718
               

               
Cow position:
               
chr10:29107061-29106785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
136, 10
               

               
Conread position:
               
438-718
               

               
Cow position:
               
chr10:69936329-69936045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
110, 193
               

               
Conread position:
               
440-718
               

               
Cow position:
               
chr10:3817019-3817301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
443-718
               

               
Cow position:
               
chr10:40105562-40105837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 46
               

               
Conread position:
               
446-603
               

               
Cow position:
               
chr10:36230282-36230440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
446-718
               

               
Cow position:
               
chr10:22529458-22529190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 200
               

               
Conread position:
               
447-718
               

               
Cow position:
               
chr10:17137796-17138057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
124, 81
               

               
Conread position:
               
448-718
               

               
Cow position:
               
chr10:20445576-20445846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 41
               

               
Conread position:
               
450-658
               

               
Cow position:
               
chr10:15113996-15113789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
124, 28
               

               
Conread position:
               
450-718
               

               
Cow position:
               
chr10:27004819-27004551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
57, 11
               

               
Conread position:
               
452-718
               

               
Cow position:
               
chr10:4641108-4641375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
455-718
               

               
Cow position:
               
chr10:6221011-6221274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
121, 98
               

               
Conread position:
               
458-717
               

               
Cow position:
               
chr10:21432008-21432268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
115, 175
               

               
Conread position:
               
460-707
               

               
Cow position:
               
chr10:54751116-54751361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
113, 173
               

               
Conread position:
               
464-718
               

               
Cow position:
               
chr10:50198765-50199012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
13, 70
               

               
Conread position:
               
465-718
               

               
Cow position:
               
chr10:40375781-40376036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
28, 120
               

               
Conread position:
               
466-713
               

               
Cow position:
               
chr10:58859738-58859488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
46, 73
               

               
Conread position:
               
466-718
               

               
Cow position:
               
chr10:46171190-46171441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
107, 226
               

               
Conread position:
               
467-718
               

               
Cow position:
               
chr10:14970686-14970938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
469-715
               

               
Cow position:
               
chr10:66402052-66402296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
100, 55
               

               
Conread position:
               
475-651
               

               
Cow position:
               
chr10:28604636-28604814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
475-712
               

               
Cow position:
               
chr10:50331864-50331625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
207, 0
               

               
Conread position:
               
475-718
               

               
Cow position:
               
chr10:7895660-7895418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
101, 58
               

               
Conread position:
               
475-718
               

               
Cow position:
               
chr10:18106351-18106595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
58, 62
               

               
Conread position:
               
479-698
               

               
Cow position:
               
chr10:48742533-48742745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
484-707
               

               
Cow position:
               
chr10:21710441-21710218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
90, 129
               

               
Conread position:
               
486-717
               

               
Cow position:
               
chr10:34667102-34666881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
488-718
               

               
Cow position:
               
chr10:10147154-10147387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 180
               

               
Conread position:
               
490-659
               

               
Cow position:
               
chr10:6254173-6254008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
490-692
               

               
Cow position:
               
chr10:23934400-23934602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
43, 48
               

               
Conread position:
               
491-718
               

               
Cow position:
               
chr10:19708564-19708794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 181
               

               
Conread position:
               
495-718
               

               
Cow position:
               
chr10:64301889-64301672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
496-717
               

               
Cow position:
               
chr10:16552274-16552052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
7, 58
               

               
Conread position:
               
497-718
               

               
Cow position:
               
chr10:31022248-31022026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
9, 106
               

               
Conread position:
               
501-700
               

               
Cow position:
               
chr10:63953711-63953910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
77, 15
               

               
Conread position:
               
502-716
               

               
Cow position:
               
chr10:20111561-20111775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
74, 113
               

               
Conread position:
               
503-658
               

               
Cow position:
               
chr10:9446314-9446471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
504-715
               

               
Cow position:
               
chr10:21729889-21729677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
509-716
               

               
Cow position:
               
chr10:64305205-64304999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
65, 12
               

               
Conread position:
               
514-716
               

               
Cow position:
               
chr10:5857371-5857574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
514-718
               

               
Cow position:
               
chr10:1972742-1972542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 16
               

               
Conread position:
               
517-717
               

               
Cow position:
               
chr10:31044770-31044573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
62, 91
               

               
Conread position:
               
518-717
               

               
Cow position:
               
chr10:40736516-40736715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
518-718
               

               
Cow position:
               
chr10:37040833-37041034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
524-718
               

               
Cow position:
               
chr10:65308199-65308394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
526-718
               

               
Cow position:
               
chr10:38817743-38817936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
533-702
               

               
Cow position:
               
chr10:1980574-1980403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
536-695
               

               
Cow position:
               
chr10:45731116-45730956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
16, 97
               

               
Conread position:
               
536-718
               

               
Cow position:
               
chr10:52738703-52738886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
536-718
               

               
Cow position:
               
chr10:68096485-68096300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
40, 95
               

               
Conread position:
               
540-713
               

               
Cow position:
               
chr10:51837866-51837692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
39, 163
               

               
Conread position:
               
543-718
               

               
Cow position:
               
chr10:20397783-20397954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
33, 111
               

               
Conread position:
               
552-718
               

               
Cow position:
               
chr10:28040703-28040533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
560-718
               

               
Cow position:
               
chr10:48390886-48390727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
560-718
               

               
Cow position:
               
chr10:69530331-69530489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
16, 142
               

               
Conread position:
               
563-718
               

               
Cow position:
               
chr10:9799710-9799556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 71
               

               
Conread position:
               
565-718
               

               
Cow position:
               
chr10:10722367-10722217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
11, 36
               

               
Conread position:
               
567-718
               

               
Cow position:
               
chr10:65133397-65133245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
9, 102
               

               
Conread position:
               
599-718
               

               
Cow position:
               
chr10:27120999-27120880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.