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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8027O04.5
        

               
Conread position:
               
1-172
               

               
Cow position:
               
chr22:30172444-30172618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
63, 51
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr22:12729455-12729265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
11, 109
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr22:1267529-1267326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
52, 133
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr22:11806516-11806315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
106, 133
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr22:36573789-36573577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
110, 57
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr22:22934248-22933989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
109, 181
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr22:15494787-15495061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
55, 186
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr22:10548878-10549142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
109, 133
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr22:5888948-5888679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
112, 31
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr22:6500690-6500415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
112, 28
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr22:44910766-44911058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
123, 111
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr22:44516931-44516632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
109, 134
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr22:36585610-36585301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
105, 210
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr22:50271-50585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
132, 33
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr22:28555936-28555622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
109, 207
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr22:28712911-28713222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 133
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr22:35918297-35918602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
203, 118
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr22:35935681-35935971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
98, 51
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chr22:29037911-29038228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
173, 97
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr22:36544720-36544393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 177
               

               
Conread position:
               
1-376
               

               
Cow position:
               
chr22:39467277-39466897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 111
               

               
Conread position:
               
1-383
               

               
Cow position:
               
chr22:7154974-7154592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
109, 133
               

               
Conread position:
               
1-383
               

               
Cow position:
               
chr22:23826045-23826423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
228, 106
               

               
Conread position:
               
1-395
               

               
Cow position:
               
chr22:8132550-8132151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 133
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr22:44605705-44605277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
109, 176
               

               
Conread position:
               
1-423
               

               
Cow position:
               
chr22:44936174-44936606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 172
               

               
Conread position:
               
1-429
               

               
Cow position:
               
chr22:32205300-32205729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
132, 111
               

               
Conread position:
               
1-432
               

               
Cow position:
               
chr22:31581903-31581487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
50, 76
               

               
Conread position:
               
1-446
               

               
Cow position:
               
chr22:44367244-44366791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 55
               

               
Conread position:
               
1-453
               

               
Cow position:
               
chr22:43047121-43046673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 180
               

               
Conread position:
               
1-468
               

               
Cow position:
               
chr22:30068237-30067763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 350
               

               
Conread position:
               
1-479
               

               
Cow position:
               
chr22:1862851-1863338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
73, 141
               

               
Conread position:
               
1-497
               

               
Cow position:
               
chr22:18614518-18615014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 170
               

               
Conread position:
               
1-506
               

               
Cow position:
               
chr22:16439853-16440347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
12, 62
               

               
Conread position:
               
1-508
               

               
Cow position:
               
chr22:11035534-11036038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 111
               

               
Conread position:
               
1-562
               

               
Cow position:
               
chr22:41847315-41846748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 111
               

               
Conread position:
               
1-574
               

               
Cow position:
               
chr22:10933989-10933415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 170
               

               
Conread position:
               
1-574
               

               
Cow position:
               
chr22:39039737-39039167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 111
               

               
Conread position:
               
1-603
               

               
Cow position:
               
chr22:28998300-28997689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 203
               

               
Conread position:
               
1-632
               

               
Cow position:
               
chr22:35904927-35904307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 21
               

               
Conread position:
               
1-641
               

               
Cow position:
               
chr22:11802817-11802163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
658
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 203
               

               
Conread position:
               
1-650
               

               
Cow position:
               
chr22:8735483-8734824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
666
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 39
               

               
Conread position:
               
1-665
               

               
Cow position:
               
chr22:9274611-9275261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
671
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 135
               

               
Conread position:
               
1-713
               

               
Cow position:
               
chr22:17894308-17893599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
727
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 63
               

               
Conread position:
               
1-715
               

               
Cow position:
               
chr22:532347-533048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
724
               

               
Alignm identity:
               
482
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 111
               

               
Conread position:
               
1-715
               

               
Cow position:
               
chr22:1482648-1483370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
503
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 115
               

               
Conread position:
               
1-715
               

               
Cow position:
               
chr22:7278779-7279499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
729
               

               
Alignm identity:
               
500
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 186
               

               
Conread position:
               
1-716
               

               
Cow position:
               
chr22:13774745-13775461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
727
               

               
Alignm identity:
               
494
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 111
               

               
Conread position:
               
1-717
               

               
Cow position:
               
chr22:13722501-13721775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
736
               

               
Alignm identity:
               
493
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 131
               

               
Conread position:
               
1-717
               

               
Cow position:
               
chr22:19141453-19140748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
482
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 27
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr22:539366-540092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
506
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 134
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr22:558470-557745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
507
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 112
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr22:980522-981248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
505
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 22
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr22:1518795-1518083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
492
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 154
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr22:3271851-3271152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
722
               

               
Alignm identity:
               
535
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 24
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr22:3276117-3275400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
727
               

               
Alignm identity:
               
504
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 203
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr22:3297493-3296795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
723
               

               
Alignm identity:
               
497
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 108
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr22:3304416-3303696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
734
               

               
Alignm identity:
               
495
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 25
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr22:3434713-3434006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
726
               

               
Alignm identity:
               
498
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 87
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr22:5014335-5015044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
493
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 113
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr22:5931843-5931125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
727
               

               
Alignm identity:
               
502
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 111
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr22:10578255-10577531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
729
               

               
Alignm identity:
               
500
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 203
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr22:11608875-11609602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
505
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 203
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr22:13208647-13209343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
729
               

               
Alignm identity:
               
502
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 69
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr22:13767571-13768268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
724
               

               
Alignm identity:
               
485
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 68
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr22:15309720-15309006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
721
               

               
Alignm identity:
               
501
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 95
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr22:17326249-17325525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
729
               

               
Alignm identity:
               
499
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 358
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr22:17995078-17994358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
527
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 58
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr22:18029506-18030213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
483
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 191
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr22:18604565-18603854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
505
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 63
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr22:20238600-20237875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
501
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 111
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr22:21193968-21193245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
729
               

               
Alignm identity:
               
498
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 203
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr22:21591660-21592380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
504
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 146
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr22:27307733-27307007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
729
               

               
Alignm identity:
               
495
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 112
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr22:28784350-28785077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
511
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 21
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr22:29854091-29854808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
494
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 132
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr22:30676475-30675770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
724
               

               
Alignm identity:
               
495
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 81
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr22:31314773-31315501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
494
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 203
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr22:31332649-31331915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
739
               

               
Alignm identity:
               
505
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 210
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr22:34170573-34171299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
733
               

               
Alignm identity:
               
502
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 203
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr22:34604454-34605170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
734
               

               
Alignm identity:
               
484
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 133
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr22:34822900-34822193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
480
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 111
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr22:35669433-35668711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
733
               

               
Alignm identity:
               
501
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 203
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr22:36859314-36858579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
741
               

               
Alignm identity:
               
510
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 111
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr22:37269331-37270053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
480
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 111
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr22:40372643-40373358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
734
               

               
Alignm identity:
               
481
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 167
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr22:42993408-42994130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
726
               

               
Alignm identity:
               
488
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 242
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr22:45280176-45280906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
734
               

               
Alignm identity:
               
496
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 111
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr22:46523909-46524629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
740
               

               
Alignm identity:
               
482
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 84
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr22:46579483-46578754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
740
               

               
Alignm identity:
               
483
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 48
               

               
Conread position:
               
1-720
               

               
Cow position:
               
chr22:40588643-40589349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
478
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 111
               

               
Conread position:
               
2-162
               

               
Cow position:
               
chr22:8826091-8825932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
118, 110
               

               
Conread position:
               
2-718
               

               
Cow position:
               
chr22:324929-324210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
734
               

               
Alignm identity:
               
493
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 207
               

               
Conread position:
               
2-718
               

               
Cow position:
               
chr22:48272793-48272052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
759
               

               
Alignm identity:
               
511
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 102
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr22:36271370-36271576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
60, 203
               

               
Conread position:
               
3-276
               

               
Cow position:
               
chr22:18842395-18842666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
102, 151
               

               
Conread position:
               
3-302
               

               
Cow position:
               
chr22:46584041-46583740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
130, 109
               

               
Conread position:
               
3-304
               

               
Cow position:
               
chr22:14987562-14987271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
266, 70
               

               
Conread position:
               
3-322
               

               
Cow position:
               
chr22:1807188-1807511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
51, 111
               

               
Conread position:
               
3-349
               

               
Cow position:
               
chr22:41338850-41339191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
199, 85
               

               
Conread position:
               
3-367
               

               
Cow position:
               
chr22:22957075-22956704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
130, 109
               

               
Conread position:
               
3-381
               

               
Cow position:
               
chr22:1708165-1708543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
130, 109
               

               
Conread position:
               
3-423
               

               
Cow position:
               
chr22:6334050-6334474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
126, 109
               

               
Conread position:
               
3-506
               

               
Cow position:
               
chr22:41473459-41472944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 223
               

               
Conread position:
               
3-527
               

               
Cow position:
               
chr22:2562528-2561983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 439
               

               
Conread position:
               
3-649
               

               
Cow position:
               
chr22:8119006-8118349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
671
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 199
               

               
Conread position:
               
3-711
               

               
Cow position:
               
chr22:36185863-36186582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
725
               

               
Alignm identity:
               
485
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 201
               

               
Conread position:
               
3-717
               

               
Cow position:
               
chr22:24818519-24817807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
723
               

               
Alignm identity:
               
486
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 232
               

               
Conread position:
               
3-718
               

               
Cow position:
               
chr22:10907964-10907248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
729
               

               
Alignm identity:
               
509
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 151
               

               
Conread position:
               
3-718
               

               
Cow position:
               
chr22:15871037-15871750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
733
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 50
               

               
Conread position:
               
3-718
               

               
Cow position:
               
chr22:26105914-26105182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
737
               

               
Alignm identity:
               
500
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 117
               

               
Conread position:
               
3-718
               

               
Cow position:
               
chr22:36356311-36357021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
727
               

               
Alignm identity:
               
496
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 27
               

               
Conread position:
               
3-718
               

               
Cow position:
               
chr22:43235081-43235794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
502
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 144
               

               
Conread position:
               
4-443
               

               
Cow position:
               
chr22:34609921-34610360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 175
               

               
Conread position:
               
4-462
               

               
Cow position:
               
chr22:34595976-34596435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 51
               

               
Conread position:
               
6-366
               

               
Cow position:
               
chr22:3805886-3806259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
64, 199
               

               
Conread position:
               
7-204
               

               
Cow position:
               
chr22:3516091-3515889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
103, 198
               

               
Conread position:
               
8-446
               

               
Cow position:
               
chr22:14156922-14156482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 63
               

               
Conread position:
               
9-527
               

               
Cow position:
               
chr22:37537233-37536712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 103
               

               
Conread position:
               
9-689
               

               
Cow position:
               
chr22:40608657-40609345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
703
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 118
               

               
Conread position:
               
9-716
               

               
Cow position:
               
chr22:3759566-3758879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
716
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
99, 165
               

               
Conread position:
               
9-717
               

               
Cow position:
               
chr22:9461298-9461989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
718
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
20, 80
               

               
Conread position:
               
9-718
               

               
Cow position:
               
chr22:27512739-27513438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 103
               

               
Conread position:
               
13-690
               

               
Cow position:
               
chr22:1324378-1325067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
700
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 59
               

               
Conread position:
               
15-395
               

               
Cow position:
               
chr22:13546663-13546278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
89, 108
               

               
Conread position:
               
21-718
               

               
Cow position:
               
chr22:696179-696888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
711
               

               
Alignm identity:
               
492
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 183
               

               
Conread position:
               
22-355
               

               
Cow position:
               
chr22:13662707-13663049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
22, 167
               

               
Conread position:
               
22-717
               

               
Cow position:
               
chr22:6515032-6514341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
716
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
91, 57
               

               
Conread position:
               
22-718
               

               
Cow position:
               
chr22:7101522-7100819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
708
               

               
Alignm identity:
               
510
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 121
               

               
Conread position:
               
23-377
               

               
Cow position:
               
chr22:18813768-18813404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
87, 16
               

               
Conread position:
               
23-627
               

               
Cow position:
               
chr22:15853693-15854319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 112
               

               
Conread position:
               
23-707
               

               
Cow position:
               
chr22:132388-131740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
694
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
90, 15
               

               
Conread position:
               
23-718
               

               
Cow position:
               
chr22:2391280-2390580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
715
               

               
Alignm identity:
               
512
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 149
               

               
Conread position:
               
25-310
               

               
Cow position:
               
chr22:44398691-44398981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
81, 183
               

               
Conread position:
               
26-527
               

               
Cow position:
               
chr22:11780717-11780207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 160
               

               
Conread position:
               
28-550
               

               
Cow position:
               
chr22:15954774-15954234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 178
               

               
Conread position:
               
29-718
               

               
Cow position:
               
chr22:10783981-10784671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
710
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
171, 337
               

               
Conread position:
               
32-646
               

               
Cow position:
               
chr22:14088707-14088094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
80, 142
               

               
Conread position:
               
35-718
               

               
Cow position:
               
chr22:41169180-41169853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
697
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
110, 46
               

               
Conread position:
               
50-718
               

               
Cow position:
               
chr22:44101054-44100382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
676
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 62
               

               
Conread position:
               
57-444
               

               
Cow position:
               
chr22:15277666-15278060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
56, 151
               

               
Conread position:
               
58-526
               

               
Cow position:
               
chr22:41242722-41243187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 97
               

               
Conread position:
               
59-700
               

               
Cow position:
               
chr22:15354982-15355632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
658
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 13
               

               
Conread position:
               
64-718
               

               
Cow position:
               
chr22:33799699-33799061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
668
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 48
               

               
Conread position:
               
72-718
               

               
Cow position:
               
chr22:25969332-25968693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
656
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 40
               

               
Conread position:
               
72-718
               

               
Cow position:
               
chr22:45014735-45014069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
675
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 40
               

               
Conread position:
               
76-717
               

               
Cow position:
               
chr22:30754564-30755201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
655
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
59, 37
               

               
Conread position:
               
83-376
               

               
Cow position:
               
chr22:9731788-9731485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
22, 277
               

               
Conread position:
               
92-511
               

               
Cow position:
               
chr22:11768417-11768007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
239, 8
               

               
Conread position:
               
95-717
               

               
Cow position:
               
chr22:1026342-1026965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 109
               

               
Conread position:
               
100-500
               

               
Cow position:
               
chr22:11636086-11635683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
19, 31
               

               
Conread position:
               
105-305
               

               
Cow position:
               
chr22:44479097-44479298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
99, 95
               

               
Conread position:
               
108-609
               

               
Cow position:
               
chr22:39452941-39453440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
223, 40
               

               
Conread position:
               
109-715
               

               
Cow position:
               
chr22:14823309-14822704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 105
               

               
Conread position:
               
115-716
               

               
Cow position:
               
chr22:2039683-2040277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 69
               

               
Conread position:
               
129-716
               

               
Cow position:
               
chr22:26337692-26338270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 41
               

               
Conread position:
               
133-716
               

               
Cow position:
               
chr22:46612617-46612043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 160
               

               
Conread position:
               
133-718
               

               
Cow position:
               
chr22:19601433-19600844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 67
               

               
Conread position:
               
150-527
               

               
Cow position:
               
chr22:5935757-5935388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 12
               

               
Conread position:
               
153-376
               

               
Cow position:
               
chr22:10326503-10326728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
55, 47
               

               
Conread position:
               
157-705
               

               
Cow position:
               
chr22:15054986-15055538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 165
               

               
Conread position:
               
163-624
               

               
Cow position:
               
chr22:41921495-41921966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
66, 34
               

               
Conread position:
               
168-717
               

               
Cow position:
               
chr22:13652970-13653511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
13, 84
               

               
Conread position:
               
171-527
               

               
Cow position:
               
chr22:583678-583340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
91, 28
               

               
Conread position:
               
173-714
               

               
Cow position:
               
chr22:10601279-10601823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 35
               

               
Conread position:
               
173-717
               

               
Cow position:
               
chr22:1311500-1310965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 51
               

               
Conread position:
               
180-718
               

               
Cow position:
               
chr22:12729236-12728704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 20
               

               
Conread position:
               
181-718
               

               
Cow position:
               
chr22:25941683-25942227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 19
               

               
Conread position:
               
187-718
               

               
Cow position:
               
chr22:18196703-18197235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 21
               

               
Conread position:
               
187-718
               

               
Cow position:
               
chr22:29956764-29956234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 79
               

               
Conread position:
               
197-490
               

               
Cow position:
               
chr22:36596107-36595821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
31, 153
               

               
Conread position:
               
220-665
               

               
Cow position:
               
chr22:38962734-38963178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 100
               

               
Conread position:
               
220-718
               

               
Cow position:
               
chr22:6634512-6635006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 78
               

               
Conread position:
               
222-477
               

               
Cow position:
               
chr22:6581421-6581668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
158, 85
               

               
Conread position:
               
227-718
               

               
Cow position:
               
chr22:15888278-15888773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 118
               

               
Conread position:
               
227-718
               

               
Cow position:
               
chr22:22410895-22411380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
56, 17
               

               
Conread position:
               
232-718
               

               
Cow position:
               
chr22:8487408-8486916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 162
               

               
Conread position:
               
235-525
               

               
Cow position:
               
chr22:17812157-17811862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
96, 159
               

               
Conread position:
               
235-580
               

               
Cow position:
               
chr22:42230965-42230632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
79, 34
               

               
Conread position:
               
235-715
               

               
Cow position:
               
chr22:32020071-32019612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
339, 72
               

               
Conread position:
               
237-717
               

               
Cow position:
               
chr22:8647307-8646815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 41
               

               
Conread position:
               
242-643
               

               
Cow position:
               
chr22:16693104-16693505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 27
               

               
Conread position:
               
243-519
               

               
Cow position:
               
chr22:23867532-23867259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
76, 107
               

               
Conread position:
               
250-604
               

               
Cow position:
               
chr22:19019077-19018719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
57, 129
               

               
Conread position:
               
250-718
               

               
Cow position:
               
chr22:8338908-8339374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 233
               

               
Conread position:
               
253-718
               

               
Cow position:
               
chr22:283485-283026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
9, 16
               

               
Conread position:
               
258-595
               

               
Cow position:
               
chr22:30172832-30173164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
57, 33
               

               
Conread position:
               
258-718
               

               
Cow position:
               
chr22:33952459-33951993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 76
               

               
Conread position:
               
262-718
               

               
Cow position:
               
chr22:37291336-37290885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 64
               

               
Conread position:
               
270-718
               

               
Cow position:
               
chr22:22934278-22934732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
270-718
               

               
Cow position:
               
chr22:32337826-32338280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 124
               

               
Conread position:
               
272-716
               

               
Cow position:
               
chr22:12869944-12869499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 35
               

               
Conread position:
               
272-718
               

               
Cow position:
               
chr22:10549237-10549690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 122
               

               
Conread position:
               
280-718
               

               
Cow position:
               
chr22:6499175-6498736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 119
               

               
Conread position:
               
282-717
               

               
Cow position:
               
chr22:36573006-36572575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 210
               

               
Conread position:
               
286-718
               

               
Cow position:
               
chr22:5625242-5624809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 182
               

               
Conread position:
               
293-710
               

               
Cow position:
               
chr22:36556600-36556185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 7
               

               
Conread position:
               
300-718
               

               
Cow position:
               
chr22:3806156-3806578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 15
               

               
Conread position:
               
306-718
               

               
Cow position:
               
chr22:46032774-46033186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 54
               

               
Conread position:
               
307-717
               

               
Cow position:
               
chr22:36585069-36584671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 140
               

               
Conread position:
               
308-479
               

               
Cow position:
               
chr22:10015490-10015667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
308-659
               

               
Cow position:
               
chr22:40384455-40384796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
257, 29
               

               
Conread position:
               
308-717
               

               
Cow position:
               
chr22:36544205-36543818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 11
               

               
Conread position:
               
308-718
               

               
Cow position:
               
chr22:21364972-21364580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 37
               

               
Conread position:
               
308-718
               

               
Cow position:
               
chr22:22029772-22030179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 19
               

               
Conread position:
               
309-573
               

               
Cow position:
               
chr22:35918226-35917969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
193, 17
               

               
Conread position:
               
309-608
               

               
Cow position:
               
chr22:35935610-35935314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
266, 17
               

               
Conread position:
               
311-705
               

               
Cow position:
               
chr22:21755954-21756346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 38
               

               
Conread position:
               
325-718
               

               
Cow position:
               
chr22:18561659-18561278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
31, 20
               

               
Conread position:
               
336-718
               

               
Cow position:
               
chr22:29396681-29397053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 15
               

               
Conread position:
               
337-491
               

               
Cow position:
               
chr22:5294916-5295075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
110, 12
               

               
Conread position:
               
337-671
               

               
Cow position:
               
chr22:44399130-44399463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 14
               

               
Conread position:
               
337-707
               

               
Cow position:
               
chr22:32344510-32344145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
154, 18
               

               
Conread position:
               
337-716
               

               
Cow position:
               
chr22:46582312-46581944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 7
               

               
Conread position:
               
337-718
               

               
Cow position:
               
chr22:28556271-28556651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 14
               

               
Conread position:
               
337-718
               

               
Cow position:
               
chr22:44381882-44381501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 18
               

               
Conread position:
               
338-717
               

               
Cow position:
               
chr22:518787-518420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
18, 191
               

               
Conread position:
               
342-508
               

               
Cow position:
               
chr22:5943624-5943459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
32, 13
               

               
Conread position:
               
342-718
               

               
Cow position:
               
chr22:19821765-19822142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 68
               

               
Conread position:
               
342-720
               

               
Cow position:
               
chr22:44480103-44480478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
34, 7
               

               
Conread position:
               
343-718
               

               
Cow position:
               
chr22:15878422-15878052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
13, 22
               

               
Conread position:
               
345-698
               

               
Cow position:
               
chr22:41158330-41157978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
11, 64
               

               
Conread position:
               
349-713
               

               
Cow position:
               
chr22:15495000-15495358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 24
               

               
Conread position:
               
355-716
               

               
Cow position:
               
chr22:44493856-44494216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 300
               

               
Conread position:
               
355-718
               

               
Cow position:
               
chr22:7595327-7595678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
193, 76
               

               
Conread position:
               
355-718
               

               
Cow position:
               
chr22:14629790-14629426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 34
               

               
Conread position:
               
361-713
               

               
Cow position:
               
chr22:94210-93868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
366-718
               

               
Cow position:
               
chr22:46569486-46569132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
219, 27
               

               
Conread position:
               
368-719
               

               
Cow position:
               
chr22:41034337-41034680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
208, 63
               

               
Conread position:
               
371-716
               

               
Cow position:
               
chr22:9729363-9729018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 228
               

               
Conread position:
               
371-717
               

               
Cow position:
               
chr22:8595400-8595049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
371-718
               

               
Cow position:
               
chr22:28713469-28713819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
387-712
               

               
Cow position:
               
chr22:21956803-21957120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
28, 9
               

               
Conread position:
               
390-718
               

               
Cow position:
               
chr22:5314866-5315197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 325
               

               
Conread position:
               
394-713
               

               
Cow position:
               
chr22:31131643-31131960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
117, 40
               

               
Conread position:
               
395-692
               

               
Cow position:
               
chr22:32812925-32812627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 0
               

               
Conread position:
               
395-718
               

               
Cow position:
               
chr22:18808595-18808272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 68
               

               
Conread position:
               
395-718
               

               
Cow position:
               
chr22:18812276-18811953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 68
               

               
Conread position:
               
395-718
               

               
Cow position:
               
chr22:39465908-39465584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
398-636
               

               
Cow position:
               
chr22:28042907-28043146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
7, 140
               

               
Conread position:
               
398-718
               

               
Cow position:
               
chr22:39473984-39473659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 0
               

               
Conread position:
               
398-718
               

               
Cow position:
               
chr22:44461028-44461340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
398-718
               

               
Cow position:
               
chr22:44516575-44516264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
136, 172
               

               
Conread position:
               
401-710
               

               
Cow position:
               
chr22:137467-137771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
278, 78
               

               
Conread position:
               
401-718
               

               
Cow position:
               
chr22:7155298-7155613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 232
               

               
Conread position:
               
402-718
               

               
Cow position:
               
chr22:15014053-15013736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
172, 26
               

               
Conread position:
               
404-716
               

               
Cow position:
               
chr22:840032-839719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
12, 136
               

               
Conread position:
               
412-679
               

               
Cow position:
               
chr22:11970818-11970552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
165, 222
               

               
Conread position:
               
412-712
               

               
Cow position:
               
chr22:36504380-36504079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 125
               

               
Conread position:
               
412-718
               

               
Cow position:
               
chr22:51166-51473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 258
               

               
Conread position:
               
413-641
               

               
Cow position:
               
chr22:19305470-19305243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
161, 101
               

               
Conread position:
               
413-718
               

               
Cow position:
               
chr22:32209295-32209599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 103
               

               
Conread position:
               
413-718
               

               
Cow position:
               
chr22:42500712-42500405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 0
               

               
Conread position:
               
415-710
               

               
Cow position:
               
chr22:31416088-31416383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
114, 74
               

               
Conread position:
               
416-718
               

               
Cow position:
               
chr22:39132550-39132848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
135, 29
               

               
Conread position:
               
420-713
               

               
Cow position:
               
chr22:288968-288680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 105
               

               
Conread position:
               
420-718
               

               
Cow position:
               
chr22:6339318-6339617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 48
               

               
Conread position:
               
420-718
               

               
Cow position:
               
chr22:34614704-34614998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 60
               

               
Conread position:
               
421-718
               

               
Cow position:
               
chr22:35162992-35162700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 109
               

               
Conread position:
               
426-718
               

               
Cow position:
               
chr22:46440766-46440481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
148, 38
               

               
Conread position:
               
428-714
               

               
Cow position:
               
chr22:1709649-1709939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
5, 97
               

               
Conread position:
               
428-718
               

               
Cow position:
               
chr22:29185461-29185163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
435-718
               

               
Cow position:
               
chr22:38552718-38553009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
58, 195
               

               
Conread position:
               
436-718
               

               
Cow position:
               
chr22:43046503-43046223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
165, 100
               

               
Conread position:
               
437-718
               

               
Cow position:
               
chr22:3714828-3714546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
437-718
               

               
Cow position:
               
chr22:12226217-12225938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
56, 197
               

               
Conread position:
               
439-718
               

               
Cow position:
               
chr22:9268878-9269158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
439-718
               

               
Cow position:
               
chr22:34596542-34596821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 98
               

               
Conread position:
               
444-718
               

               
Cow position:
               
chr22:22106729-22107000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
16, 180
               

               
Conread position:
               
450-716
               

               
Cow position:
               
chr22:44366522-44366255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
454-706
               

               
Cow position:
               
chr22:34932374-34932132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
122, 71
               

               
Conread position:
               
456-718
               

               
Cow position:
               
chr22:14156252-14156000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
182, 83
               

               
Conread position:
               
461-605
               

               
Cow position:
               
chr22:12625670-12625527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
113, 56
               

               
Conread position:
               
466-718
               

               
Cow position:
               
chr22:12969695-12969436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
17, 53
               

               
Conread position:
               
467-718
               

               
Cow position:
               
chr22:25725299-25725047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
469-718
               

               
Cow position:
               
chr22:1863352-1863605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
185, 108
               

               
Conread position:
               
472-714
               

               
Cow position:
               
chr22:4227521-4227286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
472-717
               

               
Cow position:
               
chr22:11785356-11785110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
472-718
               

               
Cow position:
               
chr22:36595784-36595545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
41, 181
               

               
Conread position:
               
473-716
               

               
Cow position:
               
chr22:26168039-26167788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
89, 196
               

               
Conread position:
               
475-718
               

               
Cow position:
               
chr22:1624564-1624809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
477-716
               

               
Cow position:
               
chr22:10621493-10621720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
98, 51
               

               
Conread position:
               
485-716
               

               
Cow position:
               
chr22:22044029-22044265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
86, 133
               

               
Conread position:
               
486-718
               

               
Cow position:
               
chr22:26243117-26243341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
64, 144
               

               
Conread position:
               
496-718
               

               
Cow position:
               
chr22:28129487-28129709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
78, 137
               

               
Conread position:
               
497-718
               

               
Cow position:
               
chr22:41472789-41472569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
132, 80
               

               
Conread position:
               
503-712
               

               
Cow position:
               
chr22:11036248-11036453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
81, 30
               

               
Conread position:
               
503-718
               

               
Cow position:
               
chr22:39902122-39902338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
505-711
               

               
Cow position:
               
chr22:5935144-5934928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
506-707
               

               
Cow position:
               
chr22:30067755-30067554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
71, 158
               

               
Conread position:
               
506-717
               

               
Cow position:
               
chr22:15867891-15868102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
514-682
               

               
Cow position:
               
chr22:2561701-2561532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
515-718
               

               
Cow position:
               
chr22:13248586-13248785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
18, 22
               

               
Conread position:
               
515-718
               

               
Cow position:
               
chr22:20570288-20570084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
522-687
               

               
Cow position:
               
chr22:11779921-11779757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
536-697
               

               
Cow position:
               
chr22:41928774-41928611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
536-720
               

               
Cow position:
               
chr22:41946933-41946748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
49, 78
               

               
Conread position:
               
540-658
               

               
Cow position:
               
chr22:19049201-19049079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
553-718
               

               
Cow position:
               
chr22:6722776-6722610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
553-718
               

               
Cow position:
               
chr22:29661571-29661737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
553-718
               

               
Cow position:
               
chr22:40829278-40829112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               
Show alignments to all cow chromosomes.