Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8027O04.5 |
| Conread position: | 1-110 |
| Cow position: | chr27:4802962-4802853 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-110 |
| Cow position: | chr27:21453655-21453764 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-155 |
| Cow position: | chr27:6016664-6016820 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 1-161 |
| Cow position: | chr27:24573865-24573701 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 1-163 |
| Cow position: | chr27:25786581-25786416 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 54, 60 |
| Conread position: | 1-165 |
| Cow position: | chr27:25884680-25884509 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 1-166 |
| Cow position: | chr27:1502584-1502420 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 1-169 |
| Cow position: | chr27:66580-66408 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 1-172 |
| Cow position: | chr27:27235377-27235540 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 79, 40 |
| Conread position: | 1-310 |
| Cow position: | chr27:23293790-23294088 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 132, 57 |
| Conread position: | 1-310 |
| Cow position: | chr27:25801950-25801636 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 109, 176 |
| Conread position: | 1-406 |
| Cow position: | chr27:11433357-11433761 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 263 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 93, 167 |
| Conread position: | 1-558 |
| Cow position: | chr27:3995665-3995106 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 288 |
| Conread position: | 1-596 |
| Cow position: | chr27:26327289-26327890 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 78 |
| Conread position: | 1-597 |
| Cow position: | chr27:28294632-28294030 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 30 |
| Conread position: | 1-628 |
| Cow position: | chr27:21284967-21284335 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 97 |
| Conread position: | 1-651 |
| Cow position: | chr27:26553210-26552556 (view UCSC Genome Browser custom track) |
| Alignm length: | 675 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 215 |
| Conread position: | 1-700 |
| Cow position: | chr27:8200035-8200740 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 129 |
| Conread position: | 1-703 |
| Cow position: | chr27:28923212-28923944 (view UCSC Genome Browser custom track) |
| Alignm length: | 739 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 570 |
| Conread position: | 1-713 |
| Cow position: | chr27:23446482-23445798 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 450 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 106, 10 |
| Conread position: | 1-716 |
| Cow position: | chr27:3991232-3991954 (view UCSC Genome Browser custom track) |
| Alignm length: | 738 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 209 |
| Conread position: | 1-716 |
| Cow position: | chr27:9331970-9332696 (view UCSC Genome Browser custom track) |
| Alignm length: | 732 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 204 |
| Conread position: | 1-717 |
| Cow position: | chr27:27194114-27193415 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 330, 111 |
| Conread position: | 1-718 |
| Cow position: | chr27:166682-165969 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 32 |
| Conread position: | 1-718 |
| Cow position: | chr27:4981607-4982323 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 54 |
| Conread position: | 1-718 |
| Cow position: | chr27:5913162-5913889 (view UCSC Genome Browser custom track) |
| Alignm length: | 736 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 203 |
| Conread position: | 1-718 |
| Cow position: | chr27:8591290-8592017 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 543 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 221 |
| Conread position: | 1-718 |
| Cow position: | chr27:9990981-9990258 (view UCSC Genome Browser custom track) |
| Alignm length: | 731 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 111 |
| Conread position: | 1-718 |
| Cow position: | chr27:13352542-13353257 (view UCSC Genome Browser custom track) |
| Alignm length: | 737 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 71 |
| Conread position: | 1-718 |
| Cow position: | chr27:13900129-13900845 (view UCSC Genome Browser custom track) |
| Alignm length: | 729 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 54 |
| Conread position: | 1-718 |
| Cow position: | chr27:15034871-15034142 (view UCSC Genome Browser custom track) |
| Alignm length: | 738 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 205 |
| Conread position: | 1-718 |
| Cow position: | chr27:15273846-15273121 (view UCSC Genome Browser custom track) |
| Alignm length: | 730 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 112 |
| Conread position: | 1-718 |
| Cow position: | chr27:15635105-15634383 (view UCSC Genome Browser custom track) |
| Alignm length: | 730 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 134 |
| Conread position: | 1-718 |
| Cow position: | chr27:16032164-16031446 (view UCSC Genome Browser custom track) |
| Alignm length: | 729 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 153 |
| Conread position: | 1-718 |
| Cow position: | chr27:19524489-19523757 (view UCSC Genome Browser custom track) |
| Alignm length: | 737 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 203 |
| Conread position: | 1-718 |
| Cow position: | chr27:22743156-22742463 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 134 |
| Conread position: | 1-718 |
| Cow position: | chr27:27665231-27665952 (view UCSC Genome Browser custom track) |
| Alignm length: | 731 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 23 |
| Conread position: | 1-718 |
| Cow position: | chr27:27730239-27729536 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 89 |
| Conread position: | 1-720 |
| Cow position: | chr27:20809638-20810374 (view UCSC Genome Browser custom track) |
| Alignm length: | 740 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 178 |
| Conread position: | 2-384 |
| Cow position: | chr27:10378161-10378549 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 265 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 111, 70 |
| Conread position: | 2-396 |
| Cow position: | chr27:30034392-30034796 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 268 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 110, 373 |
| Conread position: | 2-432 |
| Cow position: | chr27:1847147-1846714 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 277 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 7, 14 |
| Conread position: | 2-716 |
| Cow position: | chr27:25965738-25965007 (view UCSC Genome Browser custom track) |
| Alignm length: | 744 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 167 |
| Conread position: | 2-718 |
| Cow position: | chr27:1535418-1536132 (view UCSC Genome Browser custom track) |
| Alignm length: | 730 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 169 |
| Conread position: | 3-204 |
| Cow position: | chr27:5985090-5985294 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 107, 201 |
| Conread position: | 3-264 |
| Cow position: | chr27:30536229-30536484 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 192, 47 |
| Conread position: | 3-310 |
| Cow position: | chr27:27288726-27289038 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 3-638 |
| Cow position: | chr27:12263196-12262576 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 169 |
| Conread position: | 3-703 |
| Cow position: | chr27:15374064-15374754 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 100 |
| Conread position: | 3-718 |
| Cow position: | chr27:3233293-3232583 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 132 |
| Conread position: | 3-718 |
| Cow position: | chr27:17567361-17568054 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 301, 127 |
| Conread position: | 3-718 |
| Cow position: | chr27:23318682-23317983 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 44 |
| Conread position: | 4-710 |
| Cow position: | chr27:24114376-24115073 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 453 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 58, 115 |
| Conread position: | 9-192 |
| Cow position: | chr27:14270793-14270606 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 101, 157 |
| Conread position: | 9-382 |
| Cow position: | chr27:22798215-22797835 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 195 |
| Conread position: | 9-718 |
| Cow position: | chr27:12749267-12749984 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 126 |
| Conread position: | 15-534 |
| Cow position: | chr27:24297004-24296475 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 189 |
| Conread position: | 16-448 |
| Cow position: | chr27:797365-796926 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 13 |
| Conread position: | 16-496 |
| Cow position: | chr27:16965300-16964837 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 293 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 214, 26 |
| Conread position: | 17-574 |
| Cow position: | chr27:8260910-8261461 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 11 |
| Conread position: | 22-191 |
| Cow position: | chr27:25085797-25085973 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 26-718 |
| Cow position: | chr27:26599192-26599864 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 32 |
| Conread position: | 28-718 |
| Cow position: | chr27:30571077-30571784 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 180 |
| Conread position: | 32-509 |
| Cow position: | chr27:22013103-22012617 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 309 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 74, 99 |
| Conread position: | 42-718 |
| Cow position: | chr27:31267504-31268177 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 89 |
| Conread position: | 45-352 |
| Cow position: | chr27:21107904-21107597 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 65, 19 |
| Conread position: | 58-255 |
| Cow position: | chr27:15332130-15332323 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 146, 46 |
| Conread position: | 90-574 |
| Cow position: | chr27:25988703-25989174 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 324 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 48, 36 |
| Conread position: | 90-717 |
| Cow position: | chr27:23905125-23905754 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 372 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 23, 45 |
| Conread position: | 91-340 |
| Cow position: | chr27:11488013-11488262 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 44, 178 |
| Conread position: | 92-716 |
| Cow position: | chr27:1905230-1904623 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 392 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 87, 20 |
| Conread position: | 98-535 |
| Cow position: | chr27:27278052-27278482 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 294 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 20, 41 |
| Conread position: | 100-437 |
| Cow position: | chr27:1676207-1675862 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 104, 100 |
| Conread position: | 101-717 |
| Cow position: | chr27:11679664-11679059 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 387 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 128, 18 |
| Conread position: | 105-718 |
| Cow position: | chr27:18696672-18697292 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 95 |
| Conread position: | 123-718 |
| Cow position: | chr27:1520030-1520631 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 77 |
| Conread position: | 125-494 |
| Cow position: | chr27:15858306-15858682 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 45 |
| Conread position: | 125-718 |
| Cow position: | chr27:12147292-12146692 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 75 |
| Conread position: | 133-718 |
| Cow position: | chr27:4332365-4331789 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 67 |
| Conread position: | 133-719 |
| Cow position: | chr27:9255786-9255187 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 390 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 47, 37 |
| Conread position: | 150-718 |
| Cow position: | chr27:6017023-6017591 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 131 |
| Conread position: | 154-525 |
| Cow position: | chr27:22151673-22152036 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 74, 146 |
| Conread position: | 162-665 |
| Cow position: | chr27:16427092-16427573 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 54 |
| Conread position: | 171-574 |
| Cow position: | chr27:13169975-13170385 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 275 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 141, 48 |
| Conread position: | 173-636 |
| Cow position: | chr27:1031241-1031708 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 27 |
| Conread position: | 173-718 |
| Cow position: | chr27:5991639-5991091 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 43 |
| Conread position: | 173-718 |
| Cow position: | chr27:22722767-22723305 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 98 |
| Conread position: | 178-568 |
| Cow position: | chr27:27235757-27236148 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 22 |
| Conread position: | 195-656 |
| Cow position: | chr27:25786185-25785725 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 163 |
| Conread position: | 207-718 |
| Cow position: | chr27:29858913-29859422 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 195 |
| Conread position: | 220-621 |
| Cow position: | chr27:20283366-20282970 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 9, 193 |
| Conread position: | 232-500 |
| Cow position: | chr27:1082448-1082720 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 92, 68 |
| Conread position: | 232-591 |
| Cow position: | chr27:17404403-17404038 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 246 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 99, 162 |
| Conread position: | 232-598 |
| Cow position: | chr27:29952726-29953092 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 256 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 68, 167 |
| Conread position: | 232-718 |
| Cow position: | chr27:5984567-5984079 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 126 |
| Conread position: | 232-718 |
| Cow position: | chr27:26855522-26856017 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 113 |
| Conread position: | 243-527 |
| Cow position: | chr27:28042983-28042694 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 88, 151 |
| Conread position: | 246-718 |
| Cow position: | chr27:5924735-5925224 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 331 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 65, 22 |
| Conread position: | 258-706 |
| Cow position: | chr27:30750869-30750438 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 296 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 69, 60 |
| Conread position: | 259-718 |
| Cow position: | chr27:14296712-14297169 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 167 |
| Conread position: | 269-718 |
| Cow position: | chr27:26621752-26621299 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 295 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 33, 123 |
| Conread position: | 270-713 |
| Cow position: | chr27:21450939-21451391 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 223 |
| Conread position: | 270-718 |
| Cow position: | chr27:8960532-8960078 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 124 |
| Conread position: | 283-560 |
| Cow position: | chr27:25059659-25059936 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 21, 68 |
| Conread position: | 300-718 |
| Cow position: | chr27:8726114-8726532 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 272, 6 |
| Conread position: | 303-718 |
| Cow position: | chr27:27500783-27501183 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 277 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 77, 15 |
| Conread position: | 307-708 |
| Cow position: | chr27:11488557-11488948 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 267, 34 |
| Conread position: | 325-691 |
| Cow position: | chr27:2380144-2380507 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 248 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 31, 19 |
| Conread position: | 332-647 |
| Cow position: | chr27:1498619-1498925 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 93 |
| Conread position: | 337-672 |
| Cow position: | chr27:20761256-20761588 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 230 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 239, 12 |
| Conread position: | 337-703 |
| Cow position: | chr27:26031498-26031140 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 174, 71 |
| Conread position: | 337-707 |
| Cow position: | chr27:30584587-30584220 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 237, 12 |
| Conread position: | 337-718 |
| Cow position: | chr27:28686127-28685749 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 236, 12 |
| Conread position: | 337-718 |
| Cow position: | chr27:29036800-29036418 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 18 |
| Conread position: | 342-704 |
| Cow position: | chr27:2896911-2897269 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 7 |
| Conread position: | 349-718 |
| Cow position: | chr27:25972041-25971649 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 261 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 180, 79 |
| Conread position: | 354-512 |
| Cow position: | chr27:12003787-12003628 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 74, 7 |
| Conread position: | 355-538 |
| Cow position: | chr27:10260314-10260131 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 19, 34 |
| Conread position: | 355-665 |
| Cow position: | chr27:26657334-26657037 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 224 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 157, 79 |
| Conread position: | 371-717 |
| Cow position: | chr27:25801602-25801255 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 0 |
| Conread position: | 371-718 |
| Cow position: | chr27:30035415-30035766 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 70 |
| Conread position: | 372-718 |
| Cow position: | chr27:15405256-15405600 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 102 |
| Conread position: | 385-619 |
| Cow position: | chr27:5989692-5989460 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 394-718 |
| Cow position: | chr27:10578554-10578897 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 237 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 83, 165 |
| Conread position: | 395-651 |
| Cow position: | chr27:26452798-26452542 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 179, 212 |
| Conread position: | 395-710 |
| Cow position: | chr27:16788826-16788497 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 218 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 179, 47 |
| Conread position: | 395-717 |
| Cow position: | chr27:15543642-15543965 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 395-718 |
| Cow position: | chr27:27291022-27291341 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 227 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 179, 160 |
| Conread position: | 398-718 |
| Cow position: | chr27:10378817-10379138 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 119 |
| Conread position: | 408-718 |
| Cow position: | chr27:23075301-23074995 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 213, 23 |
| Conread position: | 412-627 |
| Cow position: | chr27:2348488-2348703 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 117, 8 |
| Conread position: | 412-718 |
| Cow position: | chr27:865252-865562 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 143, 110 |
| Conread position: | 412-718 |
| Cow position: | chr27:28181874-28181574 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 120, 19 |
| Conread position: | 419-718 |
| Cow position: | chr27:22648255-22647955 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 0 |
| Conread position: | 420-718 |
| Cow position: | chr27:8426510-8426809 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 5, 117 |
| Conread position: | 421-718 |
| Cow position: | chr27:773428-773726 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 435-714 |
| Cow position: | chr27:15874416-15874141 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 203 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 249, 196 |
| Conread position: | 471-718 |
| Cow position: | chr27:8972150-8972395 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 200, 0 |
| Conread position: | 490-718 |
| Cow position: | chr27:24260972-24260737 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 71, 146 |
| Conread position: | 499-718 |
| Cow position: | chr27:1082432-1082211 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 508-717 |
| Cow position: | chr27:25798998-25799209 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 73, 123 |
| Conread position: | 514-713 |
| Cow position: | chr27:8428557-8428751 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 62, 34 |
| Conread position: | 540-703 |
| Cow position: | chr27:28894766-28894930 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 543-718 |
| Cow position: | chr27:2000618-2000796 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 560-715 |
| Cow position: | chr27:17422384-17422539 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 17, 148 |
| Conread position: | 564-716 |
| Cow position: | chr27:22329009-22329163 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 569-718 |
| Cow position: | chr27:27235305-27235154 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 582-718 |
| Cow position: | chr27:26784637-26784773 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.