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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8027O04.5
        

               
Conread position:
               
1-142
               

               
Cow position:
               
chr28:1460378-1460523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
1-148
               

               
Cow position:
               
chr28:10293745-10293891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
1-165
               

               
Cow position:
               
chr28:10160977-10161144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
1-183
               

               
Cow position:
               
chr28:30806043-30806229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr28:5568430-5568615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr28:26423989-26423786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
132, 111
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr28:25675729-25675515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr28:8785707-8785939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr28:21894224-21894469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
112, 73
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr28:12152632-12152921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
112, 56
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr28:30959887-30960181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
102, 206
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr28:32790109-32789816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
65, 22
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr28:5636111-5636413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
203, 99
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr28:32588759-32588445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 203
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr28:32303956-32303624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
106, 70
               

               
Conread position:
               
1-357
               

               
Cow position:
               
chr28:23673951-23674313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 176
               

               
Conread position:
               
1-372
               

               
Cow position:
               
chr28:34730204-34730564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
109, 164
               

               
Conread position:
               
1-373
               

               
Cow position:
               
chr28:3189970-3189593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 25
               

               
Conread position:
               
1-381
               

               
Cow position:
               
chr28:10458950-10458571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
112, 57
               

               
Conread position:
               
1-432
               

               
Cow position:
               
chr28:10616770-10616331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 111
               

               
Conread position:
               
1-466
               

               
Cow position:
               
chr28:20409849-20410316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
98, 37
               

               
Conread position:
               
1-477
               

               
Cow position:
               
chr28:21378809-21379292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 57
               

               
Conread position:
               
1-538
               

               
Cow position:
               
chr28:25849361-25848814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 203
               

               
Conread position:
               
1-588
               

               
Cow position:
               
chr28:22579008-22579599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 208
               

               
Conread position:
               
1-593
               

               
Cow position:
               
chr28:24669871-24670463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 89
               

               
Conread position:
               
1-596
               

               
Cow position:
               
chr28:8718693-8718098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 111
               

               
Conread position:
               
1-604
               

               
Cow position:
               
chr28:10471926-10472533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 75
               

               
Conread position:
               
1-650
               

               
Cow position:
               
chr28:25167880-25167236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
667
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 65
               

               
Conread position:
               
1-652
               

               
Cow position:
               
chr28:7743414-7744072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
667
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 134
               

               
Conread position:
               
1-652
               

               
Cow position:
               
chr28:10579587-10578933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
663
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 203
               

               
Conread position:
               
1-668
               

               
Cow position:
               
chr28:27241376-27240698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
697
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
25, 87
               

               
Conread position:
               
1-696
               

               
Cow position:
               
chr28:17390684-17391390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
498
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 203
               

               
Conread position:
               
1-703
               

               
Cow position:
               
chr28:34084242-34083563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
710
               

               
Alignm identity:
               
480
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 22
               

               
Conread position:
               
1-709
               

               
Cow position:
               
chr28:27957456-27956744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 280
               

               
Conread position:
               
1-716
               

               
Cow position:
               
chr28:13462241-13462959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
727
               

               
Alignm identity:
               
500
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 111
               

               
Conread position:
               
1-716
               

               
Cow position:
               
chr28:15352810-15352122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
721
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 47
               

               
Conread position:
               
1-716
               

               
Cow position:
               
chr28:21568177-21568898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
509
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 226
               

               
Conread position:
               
1-716
               

               
Cow position:
               
chr28:28441032-28441735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
480
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 127
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr28:1165614-1164893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
511
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 203
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr28:1215558-1214833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
729
               

               
Alignm identity:
               
507
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 111
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr28:1507127-1507873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
749
               

               
Alignm identity:
               
517
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 221
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr28:1955641-1956368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
504
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 203
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr28:2643988-2644712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
499
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 203
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr28:5210394-5211119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
729
               

               
Alignm identity:
               
504
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 119
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr28:5749425-5748709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
506
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 25
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr28:5939762-5940483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
725
               

               
Alignm identity:
               
486
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 111
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr28:6536522-6535801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
493
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 38
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr28:7335262-7335980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
472
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 203
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr28:7828771-7829504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
743
               

               
Alignm identity:
               
506
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 111
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr28:8381318-8382044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
509
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 203
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr28:9181145-9181867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
497
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 209
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr28:12407940-12407217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
494
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 79
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr28:15685682-15686406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
483
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 119
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr28:15918251-15917528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
495
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 143
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr28:18517873-18517148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
733
               

               
Alignm identity:
               
507
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 63
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr28:21323349-21324076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
744
               

               
Alignm identity:
               
487
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 112
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr28:21361777-21362511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
485
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 28
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr28:22041120-22040411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
721
               

               
Alignm identity:
               
495
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 199
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr28:22231055-22230333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
726
               

               
Alignm identity:
               
491
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 203
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr28:23311033-23310339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
726
               

               
Alignm identity:
               
490
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 111
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr28:24591143-24591871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
500
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 203
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr28:24885130-24885858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
514
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 203
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr28:28928105-28928833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
734
               

               
Alignm identity:
               
503
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 134
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr28:29037376-29036655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
734
               

               
Alignm identity:
               
502
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 204
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr28:29822465-29823183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
495
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 111
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr28:30534792-30534063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
734
               

               
Alignm identity:
               
509
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 203
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr28:31849649-31848932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
516
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 271
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr28:33254592-33255318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
500
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 203
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr28:33638839-33639567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
502
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 203
               

               
Conread position:
               
1-718
               

               
Cow position:
               
chr28:34596516-34597241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
508
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 203
               

               
Conread position:
               
1-720
               

               
Cow position:
               
chr28:1385157-1384476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
726
               

               
Alignm identity:
               
480
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 125
               

               
Conread position:
               
2-278
               

               
Cow position:
               
chr28:3013693-3013416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
104, 197
               

               
Conread position:
               
2-367
               

               
Cow position:
               
chr28:17665044-17664677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
108, 162
               

               
Conread position:
               
2-565
               

               
Cow position:
               
chr28:1774106-1774666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 127
               

               
Conread position:
               
2-717
               

               
Cow position:
               
chr28:15033808-15033082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
501
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 110
               

               
Conread position:
               
2-717
               

               
Cow position:
               
chr28:27935614-27934904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 200
               

               
Conread position:
               
2-718
               

               
Cow position:
               
chr28:784943-785664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
499
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 55
               

               
Conread position:
               
2-718
               

               
Cow position:
               
chr28:957162-957873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
733
               

               
Alignm identity:
               
520
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 203
               

               
Conread position:
               
3-304
               

               
Cow position:
               
chr28:11503958-11503644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
85, 209
               

               
Conread position:
               
3-381
               

               
Cow position:
               
chr28:2086744-2087124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
225, 109
               

               
Conread position:
               
3-487
               

               
Cow position:
               
chr28:14190401-14189917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
110, 57
               

               
Conread position:
               
3-614
               

               
Cow position:
               
chr28:29760351-29759759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 202
               

               
Conread position:
               
3-718
               

               
Cow position:
               
chr28:7004280-7005023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
747
               

               
Alignm identity:
               
504
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 200
               

               
Conread position:
               
3-718
               

               
Cow position:
               
chr28:10302117-10302835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
727
               

               
Alignm identity:
               
502
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 109
               

               
Conread position:
               
3-718
               

               
Cow position:
               
chr28:10598953-10599658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
481
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 193
               

               
Conread position:
               
3-718
               

               
Cow position:
               
chr28:15588388-15589066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
482
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 55
               

               
Conread position:
               
3-718
               

               
Cow position:
               
chr28:30097149-30097875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
507
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 201
               

               
Conread position:
               
3-718
               

               
Cow position:
               
chr28:34582195-34582921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
729
               

               
Alignm identity:
               
499
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 201
               

               
Conread position:
               
6-701
               

               
Cow position:
               
chr28:9714311-9713615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
106, 58
               

               
Conread position:
               
8-587
               

               
Cow position:
               
chr28:29841350-29840789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
219, 86
               

               
Conread position:
               
9-189
               

               
Cow position:
               
chr28:15674598-15674776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
9-447
               

               
Cow position:
               
chr28:8907085-8906637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
100, 196
               

               
Conread position:
               
9-603
               

               
Cow position:
               
chr28:16596611-16597230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 123
               

               
Conread position:
               
9-649
               

               
Cow position:
               
chr28:25702611-25701983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 79
               

               
Conread position:
               
9-716
               

               
Cow position:
               
chr28:1812652-1811964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
712
               

               
Alignm identity:
               
480
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 103
               

               
Conread position:
               
9-718
               

               
Cow position:
               
chr28:5112438-5111725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
720
               

               
Alignm identity:
               
500
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 111
               

               
Conread position:
               
9-718
               

               
Cow position:
               
chr28:10644196-10643494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
725
               

               
Alignm identity:
               
481
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 87
               

               
Conread position:
               
12-391
               

               
Cow position:
               
chr28:5338413-5338027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
120, 101
               

               
Conread position:
               
12-487
               

               
Cow position:
               
chr28:11788302-11787827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 36
               

               
Conread position:
               
13-360
               

               
Cow position:
               
chr28:14510595-14510941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
66, 16
               

               
Conread position:
               
15-713
               

               
Cow position:
               
chr28:25041148-25040456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 97
               

               
Conread position:
               
15-718
               

               
Cow position:
               
chr28:15575378-15576057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
708
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 22
               

               
Conread position:
               
15-718
               

               
Cow position:
               
chr28:32731667-32731015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
479
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 43
               

               
Conread position:
               
22-713
               

               
Cow position:
               
chr28:21628982-21629679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
721
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
145, 28
               

               
Conread position:
               
22-718
               

               
Cow position:
               
chr28:17250256-17249584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
10, 120
               

               
Conread position:
               
22-718
               

               
Cow position:
               
chr28:28470313-28471020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
488
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 377
               

               
Conread position:
               
28-304
               

               
Cow position:
               
chr28:34409370-34409093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
6, 23
               

               
Conread position:
               
29-663
               

               
Cow position:
               
chr28:8966702-8966085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
85, 31
               

               
Conread position:
               
31-186
               

               
Cow position:
               
chr28:6231518-6231363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
73, 150
               

               
Conread position:
               
32-624
               

               
Cow position:
               
chr28:17372249-17371678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
78, 66
               

               
Conread position:
               
34-387
               

               
Cow position:
               
chr28:7812772-7813116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
170, 64
               

               
Conread position:
               
38-381
               

               
Cow position:
               
chr28:6061102-6061444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
75, 34
               

               
Conread position:
               
41-718
               

               
Cow position:
               
chr28:6958543-6959226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
692
               

               
Alignm identity:
               
457
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 115
               

               
Conread position:
               
45-444
               

               
Cow position:
               
chr28:13605623-13606028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 131
               

               
Conread position:
               
51-718
               

               
Cow position:
               
chr28:9443916-9443258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
684
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
449, 61
               

               
Conread position:
               
57-718
               

               
Cow position:
               
chr28:10576653-10576019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
666
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 52
               

               
Conread position:
               
64-276
               

               
Cow position:
               
chr28:11954426-11954643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
44, 142
               

               
Conread position:
               
64-718
               

               
Cow position:
               
chr28:23024522-23025176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
666
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 140
               

               
Conread position:
               
70-717
               

               
Cow position:
               
chr28:17188733-17189363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
655
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 81
               

               
Conread position:
               
70-718
               

               
Cow position:
               
chr28:17600649-17599989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
674
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 337
               

               
Conread position:
               
74-716
               

               
Cow position:
               
chr28:6777661-6777008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
655
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 129
               

               
Conread position:
               
87-422
               

               
Cow position:
               
chr28:15939220-15938899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
121, 11
               

               
Conread position:
               
88-649
               

               
Cow position:
               
chr28:20407088-20407652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 186
               

               
Conread position:
               
89-718
               

               
Cow position:
               
chr28:4456730-4457322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
21, 54
               

               
Conread position:
               
95-310
               

               
Cow position:
               
chr28:7738558-7738778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
95-718
               

               
Cow position:
               
chr28:483339-482711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 8
               

               
Conread position:
               
100-718
               

               
Cow position:
               
chr28:25562801-25563405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 93
               

               
Conread position:
               
103-593
               

               
Cow position:
               
chr28:25163982-25164467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 93
               

               
Conread position:
               
133-505
               

               
Cow position:
               
chr28:525552-525932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
95, 226
               

               
Conread position:
               
133-676
               

               
Cow position:
               
chr28:3460943-3461458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
96, 67
               

               
Conread position:
               
133-718
               

               
Cow position:
               
chr28:15604020-15604608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 42
               

               
Conread position:
               
151-718
               

               
Cow position:
               
chr28:25595338-25595900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 47
               

               
Conread position:
               
154-718
               

               
Cow position:
               
chr28:14110497-14111068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 46
               

               
Conread position:
               
161-718
               

               
Cow position:
               
chr28:28358344-28357786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 39
               

               
Conread position:
               
164-718
               

               
Cow position:
               
chr28:24621402-24620847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 12
               

               
Conread position:
               
173-710
               

               
Cow position:
               
chr28:1025884-1025342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 43
               

               
Conread position:
               
174-708
               

               
Cow position:
               
chr28:14491794-14492323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
108, 64
               

               
Conread position:
               
178-697
               

               
Cow position:
               
chr28:10161383-10161893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 139
               

               
Conread position:
               
178-718
               

               
Cow position:
               
chr28:1836239-1836740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 113
               

               
Conread position:
               
180-717
               

               
Cow position:
               
chr28:11545021-11544484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 20
               

               
Conread position:
               
180-718
               

               
Cow position:
               
chr28:3626499-3627012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
50, 20
               

               
Conread position:
               
211-658
               

               
Cow position:
               
chr28:15675344-15675800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
18, 128
               

               
Conread position:
               
214-468
               

               
Cow position:
               
chr28:17031347-17031112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
15, 113
               

               
Conread position:
               
220-596
               

               
Cow position:
               
chr28:20630587-20630225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
12, 66
               

               
Conread position:
               
220-687
               

               
Cow position:
               
chr28:5816146-5816618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 170
               

               
Conread position:
               
220-718
               

               
Cow position:
               
chr28:6231188-6230694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 47
               

               
Conread position:
               
222-718
               

               
Cow position:
               
chr28:5824331-5824832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 169
               

               
Conread position:
               
223-589
               

               
Cow position:
               
chr28:17603880-17603534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
351, 76
               

               
Conread position:
               
223-718
               

               
Cow position:
               
chr28:20935918-20935416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 47
               

               
Conread position:
               
223-718
               

               
Cow position:
               
chr28:26420504-26420003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 97
               

               
Conread position:
               
227-717
               

               
Cow position:
               
chr28:24488624-24489124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 366
               

               
Conread position:
               
235-707
               

               
Cow position:
               
chr28:14891461-14891938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 389
               

               
Conread position:
               
235-718
               

               
Cow position:
               
chr28:6477729-6478216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 35
               

               
Conread position:
               
242-716
               

               
Cow position:
               
chr28:12217772-12217294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 152
               

               
Conread position:
               
244-647
               

               
Cow position:
               
chr28:12228055-12227642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
62, 179
               

               
Conread position:
               
244-718
               

               
Cow position:
               
chr28:13724401-13724869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 101
               

               
Conread position:
               
246-718
               

               
Cow position:
               
chr28:5568892-5569367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 88
               

               
Conread position:
               
246-718
               

               
Cow position:
               
chr28:10771617-10772082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 70
               

               
Conread position:
               
247-718
               

               
Cow position:
               
chr28:7022090-7021621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 96
               

               
Conread position:
               
247-718
               

               
Cow position:
               
chr28:25026399-25026874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 73
               

               
Conread position:
               
252-707
               

               
Cow position:
               
chr28:3644980-3645435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 40
               

               
Conread position:
               
262-622
               

               
Cow position:
               
chr28:23800159-23800526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
6, 129
               

               
Conread position:
               
269-717
               

               
Cow position:
               
chr28:12700211-12700646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
38, 94
               

               
Conread position:
               
270-574
               

               
Cow position:
               
chr28:3013400-3013089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
273-718
               

               
Cow position:
               
chr28:3004962-3004524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 84
               

               
Conread position:
               
273-718
               

               
Cow position:
               
chr28:29436226-29435789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 27
               

               
Conread position:
               
280-718
               

               
Cow position:
               
chr28:15428232-15428669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 63
               

               
Conread position:
               
280-718
               

               
Cow position:
               
chr28:26924078-26923632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 75
               

               
Conread position:
               
285-718
               

               
Cow position:
               
chr28:24302769-24302346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 15
               

               
Conread position:
               
286-716
               

               
Cow position:
               
chr28:12936848-12936415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 67
               

               
Conread position:
               
288-628
               

               
Cow position:
               
chr28:10294369-10294708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
43, 17
               

               
Conread position:
               
290-648
               

               
Cow position:
               
chr28:15714129-15714490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 26
               

               
Conread position:
               
294-715
               

               
Cow position:
               
chr28:6812735-6812325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
249, 38
               

               
Conread position:
               
295-718
               

               
Cow position:
               
chr28:4958925-4958512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 22
               

               
Conread position:
               
300-706
               

               
Cow position:
               
chr28:32303357-32302948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
12, 51
               

               
Conread position:
               
300-718
               

               
Cow position:
               
chr28:32786843-32786429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 28
               

               
Conread position:
               
309-713
               

               
Cow position:
               
chr28:14511038-14511439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 8
               

               
Conread position:
               
310-712
               

               
Cow position:
               
chr28:34408929-34408527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 41
               

               
Conread position:
               
313-542
               

               
Cow position:
               
chr28:28183215-28183443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
134, 13
               

               
Conread position:
               
326-716
               

               
Cow position:
               
chr28:14505426-14505811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
207, 49
               

               
Conread position:
               
327-718
               

               
Cow position:
               
chr28:24498652-24499047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 14
               

               
Conread position:
               
330-716
               

               
Cow position:
               
chr28:30920596-30920226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
25, 80
               

               
Conread position:
               
332-527
               

               
Cow position:
               
chr28:12171185-12170994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
334-621
               

               
Cow position:
               
chr28:23674435-23674723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 0
               

               
Conread position:
               
334-718
               

               
Cow position:
               
chr28:16180988-16181365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 123
               

               
Conread position:
               
335-704
               

               
Cow position:
               
chr28:17746125-17745762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
234, 99
               

               
Conread position:
               
337-697
               

               
Cow position:
               
chr28:5771850-5772205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
240, 53
               

               
Conread position:
               
337-710
               

               
Cow position:
               
chr28:24561549-24561930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
6, 17
               

               
Conread position:
               
337-716
               

               
Cow position:
               
chr28:444024-444403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 21
               

               
Conread position:
               
341-716
               

               
Cow position:
               
chr28:6474626-6474256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
11, 53
               

               
Conread position:
               
341-718
               

               
Cow position:
               
chr28:25827482-25827116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 14
               

               
Conread position:
               
345-718
               

               
Cow position:
               
chr28:4044852-4045217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 78
               

               
Conread position:
               
355-716
               

               
Cow position:
               
chr28:5636684-5637046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 0
               

               
Conread position:
               
358-715
               

               
Cow position:
               
chr28:10458449-10458098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 46
               

               
Conread position:
               
358-718
               

               
Cow position:
               
chr28:6472801-6472440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 0
               

               
Conread position:
               
361-712
               

               
Cow position:
               
chr28:21105465-21105112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 168
               

               
Conread position:
               
368-601
               

               
Cow position:
               
chr28:10614101-10613873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
370-704
               

               
Cow position:
               
chr28:7813325-7813659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 187
               

               
Conread position:
               
370-718
               

               
Cow position:
               
chr28:3189385-3189034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
371-527
               

               
Cow position:
               
chr28:31949818-31949973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
371-717
               

               
Cow position:
               
chr28:11502578-11502220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
198, 100
               

               
Conread position:
               
385-590
               

               
Cow position:
               
chr28:10591259-10591053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
189, 0
               

               
Conread position:
               
391-718
               

               
Cow position:
               
chr28:7907875-7907548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 242
               

               
Conread position:
               
394-718
               

               
Cow position:
               
chr28:8787769-8788082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
185, 37
               

               
Conread position:
               
395-574
               

               
Cow position:
               
chr28:1198075-1198254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
395-695
               

               
Cow position:
               
chr28:17664293-17663993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 167
               

               
Conread position:
               
395-712
               

               
Cow position:
               
chr28:1196787-1197104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
163, 156
               

               
Conread position:
               
395-718
               

               
Cow position:
               
chr28:2088242-2088571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
402-718
               

               
Cow position:
               
chr28:30960236-30960543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
33, 39
               

               
Conread position:
               
403-718
               

               
Cow position:
               
chr28:12154524-12154841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 103
               

               
Conread position:
               
403-718
               

               
Cow position:
               
chr28:23794875-23794565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
217, 86
               

               
Conread position:
               
407-708
               

               
Cow position:
               
chr28:7233804-7234096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
165, 8
               

               
Conread position:
               
412-696
               

               
Cow position:
               
chr28:21895985-21896269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 280
               

               
Conread position:
               
412-718
               

               
Cow position:
               
chr28:25069523-25069838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 311
               

               
Conread position:
               
416-703
               

               
Cow position:
               
chr28:5791815-5791532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
17, 53
               

               
Conread position:
               
419-685
               

               
Cow position:
               
chr28:2122368-2122635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
21, 54
               

               
Conread position:
               
424-718
               

               
Cow position:
               
chr28:5337157-5336862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
150, 207
               

               
Conread position:
               
425-718
               

               
Cow position:
               
chr28:22255495-22255201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
427-703
               

               
Cow position:
               
chr28:10279542-10279836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
72, 9
               

               
Conread position:
               
432-716
               

               
Cow position:
               
chr28:7654908-7654623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
88, 230
               

               
Conread position:
               
435-714
               

               
Cow position:
               
chr28:15003978-15004257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
118, 110
               

               
Conread position:
               
436-718
               

               
Cow position:
               
chr28:20967955-20967672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
448-700
               

               
Cow position:
               
chr28:5767625-5767879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
449-718
               

               
Cow position:
               
chr28:12649957-12650227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
464-717
               

               
Cow position:
               
chr28:13880265-13880519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
470-718
               

               
Cow position:
               
chr28:3744725-3744969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 39
               

               
Conread position:
               
472-718
               

               
Cow position:
               
chr28:34678445-34678196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 67
               

               
Conread position:
               
479-718
               

               
Cow position:
               
chr28:10325828-10326058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
100, 69
               

               
Conread position:
               
489-718
               

               
Cow position:
               
chr28:4929683-4929453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
490-718
               

               
Cow position:
               
chr28:5571404-5571636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
22, 27
               

               
Conread position:
               
501-716
               

               
Cow position:
               
chr28:34879628-34879848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
54, 194
               

               
Conread position:
               
502-718
               

               
Cow position:
               
chr28:14665928-14666144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
76, 28
               

               
Conread position:
               
512-716
               

               
Cow position:
               
chr28:30966004-30966204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
62, 146
               

               
Conread position:
               
514-674
               

               
Cow position:
               
chr28:25334087-25333926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
23, 19
               

               
Conread position:
               
514-720
               

               
Cow position:
               
chr28:3067683-3067890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
46, 102
               

               
Conread position:
               
516-718
               

               
Cow position:
               
chr28:30305215-30305012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
29, 170
               

               
Conread position:
               
522-711
               

               
Cow position:
               
chr28:13606247-13606428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
536-706
               

               
Cow position:
               
chr28:12170766-12170600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
41, 51
               

               
Conread position:
               
536-718
               

               
Cow position:
               
chr28:16041839-16041655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
540-718
               

               
Cow position:
               
chr28:21379321-21379503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
545-718
               

               
Cow position:
               
chr28:12952032-12952206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
548-716
               

               
Cow position:
               
chr28:34606425-34606589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
26, 53
               

               
Conread position:
               
559-718
               

               
Cow position:
               
chr28:7443632-7443472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
571-718
               

               
Cow position:
               
chr28:17603173-17603032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
10, 0
               
Show alignments to all cow chromosomes.