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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8027P23.3
        

               
Conread position:
               
2-166
               

               
Cow position:
               
chr13:41806761-41806600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
112-411
               

               
Cow position:
               
chr13:14927588-14927277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
12, 68
               

               
Conread position:
               
160-540
               

               
Cow position:
               
chr13:60508824-60509201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
15, 39
               

               
Conread position:
               
171-408
               

               
Cow position:
               
chr13:33875945-33875711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
55, 27
               

               
Conread position:
               
171-533
               

               
Cow position:
               
chr13:61976682-61977034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 27
               

               
Conread position:
               
171-537
               

               
Cow position:
               
chr13:36771139-36771500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 61
               

               
Conread position:
               
171-540
               

               
Cow position:
               
chr13:19138720-19138359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
57, 27
               

               
Conread position:
               
171-542
               

               
Cow position:
               
chr13:25817796-25817444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 27
               

               
Conread position:
               
172-430
               

               
Cow position:
               
chr13:16270217-16269946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
54, 26
               

               
Conread position:
               
172-491
               

               
Cow position:
               
chr13:5091379-5091701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
59, 25
               

               
Conread position:
               
172-494
               

               
Cow position:
               
chr13:20175021-20174714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
56, 26
               

               
Conread position:
               
172-542
               

               
Cow position:
               
chr13:52284191-52283829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
56, 26
               

               
Conread position:
               
173-537
               

               
Cow position:
               
chr13:9142563-9142201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
10, 14
               

               
Conread position:
               
173-542
               

               
Cow position:
               
chr13:21276136-21275776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 25
               

               
Conread position:
               
173-542
               

               
Cow position:
               
chr13:25695487-25695851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
143, 25
               

               
Conread position:
               
174-442
               

               
Cow position:
               
chr13:1767049-1766781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
153, 25
               

               
Conread position:
               
174-443
               

               
Cow position:
               
chr13:55843764-55843488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
52, 24
               

               
Conread position:
               
174-447
               

               
Cow position:
               
chr13:37516854-37517131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 24
               

               
Conread position:
               
174-488
               

               
Cow position:
               
chr13:34052322-34052618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
54, 24
               

               
Conread position:
               
174-522
               

               
Cow position:
               
chr13:20683843-20684185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 24
               

               
Conread position:
               
174-542
               

               
Cow position:
               
chr13:1042676-1043052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 24
               

               
Conread position:
               
174-549
               

               
Cow position:
               
chr13:12448708-12449078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
52, 25
               

               
Conread position:
               
174-549
               

               
Cow position:
               
chr13:26382951-26383325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
35, 24
               

               
Conread position:
               
176-552
               

               
Cow position:
               
chr13:37483992-37484372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 22
               

               
Conread position:
               
191-542
               

               
Cow position:
               
chr13:43184607-43184964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 17
               

               
Conread position:
               
199-485
               

               
Cow position:
               
chr13:52199347-52199060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
35, 10
               

               
Conread position:
               
204-419
               

               
Cow position:
               
chr13:22025446-22025675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
19, 7
               

               
Conread position:
               
204-444
               

               
Cow position:
               
chr13:4553052-4552812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
24, 5
               

               
Conread position:
               
204-450
               

               
Cow position:
               
chr13:21235431-21235684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 173
               

               
Conread position:
               
204-540
               

               
Cow position:
               
chr13:12614513-12614172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
24, 5
               

               
Conread position:
               
204-542
               

               
Cow position:
               
chr13:23960552-23960885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 241
               

               
Conread position:
               
204-542
               

               
Cow position:
               
chr13:61166204-61166533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
22, 5
               

               
Conread position:
               
208-351
               

               
Cow position:
               
chr13:21988852-21989004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
208-371
               

               
Cow position:
               
chr13:12244766-12244936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
208-379
               

               
Cow position:
               
chr13:48629240-48629067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
20, 112
               

               
Conread position:
               
208-391
               

               
Cow position:
               
chr13:60436633-60436824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
208-403
               

               
Cow position:
               
chr13:58719273-58719469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
20, 167
               

               
Conread position:
               
208-405
               

               
Cow position:
               
chr13:15740316-15740111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
20, 45
               

               
Conread position:
               
208-442
               

               
Cow position:
               
chr13:6079169-6079406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
23, 225
               

               
Conread position:
               
208-444
               

               
Cow position:
               
chr13:34508126-34507885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
20, 183
               

               
Conread position:
               
208-451
               

               
Cow position:
               
chr13:21708431-21708187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
27, 151
               

               
Conread position:
               
208-452
               

               
Cow position:
               
chr13:54381685-54381935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
20, 39
               

               
Conread position:
               
208-488
               

               
Cow position:
               
chr13:7257651-7257368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
20, 181
               

               
Conread position:
               
208-490
               

               
Cow position:
               
chr13:3701682-3701408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 73
               

               
Conread position:
               
208-491
               

               
Cow position:
               
chr13:6759540-6759828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
18, 59
               

               
Conread position:
               
208-492
               

               
Cow position:
               
chr13:13266051-13265773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
18, 39
               

               
Conread position:
               
208-494
               

               
Cow position:
               
chr13:1011582-1011296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
20, 199
               

               
Conread position:
               
208-532
               

               
Cow position:
               
chr13:29814790-29814466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
119, 71
               

               
Conread position:
               
208-535
               

               
Cow position:
               
chr13:25434879-25435200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 111
               

               
Conread position:
               
208-538
               

               
Cow position:
               
chr13:42114271-42113940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 233
               

               
Conread position:
               
208-540
               

               
Cow position:
               
chr13:1231898-1231559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
20, 45
               

               
Conread position:
               
208-540
               

               
Cow position:
               
chr13:6616498-6616840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 165
               

               
Conread position:
               
208-540
               

               
Cow position:
               
chr13:12670195-12670532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 75
               

               
Conread position:
               
208-540
               

               
Cow position:
               
chr13:20605869-20606198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
20, 148
               

               
Conread position:
               
208-540
               

               
Cow position:
               
chr13:25927042-25926709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 205
               

               
Conread position:
               
208-540
               

               
Cow position:
               
chr13:50690142-50690479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
18, 235
               

               
Conread position:
               
208-540
               

               
Cow position:
               
chr13:60967014-60966688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
36, 180
               

               
Conread position:
               
208-540
               

               
Cow position:
               
chr13:61047456-61047133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
20, 61
               

               
Conread position:
               
208-542
               

               
Cow position:
               
chr13:10928740-10929071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
18, 136
               

               
Conread position:
               
208-542
               

               
Cow position:
               
chr13:17622534-17622205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
20, 81
               

               
Conread position:
               
208-542
               

               
Cow position:
               
chr13:18835436-18835121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 113
               

               
Conread position:
               
208-542
               

               
Cow position:
               
chr13:20820591-20820912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 39
               

               
Conread position:
               
208-542
               

               
Cow position:
               
chr13:23269963-23270288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 210
               

               
Conread position:
               
208-542
               

               
Cow position:
               
chr13:24754134-24753804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
20, 115
               

               
Conread position:
               
208-542
               

               
Cow position:
               
chr13:40722460-40722790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
20, 58
               

               
Conread position:
               
208-549
               

               
Cow position:
               
chr13:30798972-30798632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
14, 90
               

               
Conread position:
               
208-552
               

               
Cow position:
               
chr13:971648-971990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 118
               

               
Conread position:
               
208-552
               

               
Cow position:
               
chr13:54702440-54702094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 50
               

               
Conread position:
               
209-540
               

               
Cow position:
               
chr13:5263035-5263362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
30, 180
               

               
Conread position:
               
209-540
               

               
Cow position:
               
chr13:46324538-46324870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
13, 105
               

               
Conread position:
               
210-540
               

               
Cow position:
               
chr13:37774978-37775288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
34, 85
               

               
Conread position:
               
212-449
               

               
Cow position:
               
chr13:16343932-16343689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
16, 57
               

               
Conread position:
               
212-542
               

               
Cow position:
               
chr13:8245089-8245414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
107, 18
               

               
Conread position:
               
214-470
               

               
Cow position:
               
chr13:29122598-29122833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
12, 96
               

               
Conread position:
               
214-552
               

               
Cow position:
               
chr13:43480305-43479967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 228
               

               
Conread position:
               
215-448
               

               
Cow position:
               
chr13:8607276-8607514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
13, 50
               

               
Conread position:
               
216-480
               

               
Cow position:
               
chr13:15869361-15869102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
12, 73
               

               
Conread position:
               
216-540
               

               
Cow position:
               
chr13:20679586-20679258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 36
               

               
Conread position:
               
217-534
               

               
Cow position:
               
chr13:21287848-21288160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 104
               

               
Conread position:
               
217-550
               

               
Cow position:
               
chr13:11820819-11820506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
5, 85
               

               
Conread position:
               
218-542
               

               
Cow position:
               
chr13:18172577-18172253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 12
               

               
Conread position:
               
218-549
               

               
Cow position:
               
chr13:20839806-20839476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 29
               

               
Conread position:
               
220-408
               

               
Cow position:
               
chr13:19555990-19555803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
11, 127
               

               
Conread position:
               
220-432
               

               
Cow position:
               
chr13:26697866-26698085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
8, 27
               

               
Conread position:
               
220-443
               

               
Cow position:
               
chr13:4664623-4664859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
8, 144
               

               
Conread position:
               
220-537
               

               
Cow position:
               
chr13:17855612-17855293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
8, 142
               

               
Conread position:
               
220-537
               

               
Cow position:
               
chr13:33256734-33256422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
24, 145
               

               
Conread position:
               
220-538
               

               
Cow position:
               
chr13:889941-890248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 82
               

               
Conread position:
               
220-540
               

               
Cow position:
               
chr13:17613584-17613259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 242
               

               
Conread position:
               
220-542
               

               
Cow position:
               
chr13:20705966-20706288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 26
               

               
Conread position:
               
220-542
               

               
Cow position:
               
chr13:28683596-28683279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
112, 99
               

               
Conread position:
               
221-408
               

               
Cow position:
               
chr13:55406428-55406610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
7, 57
               

               
Conread position:
               
221-425
               

               
Cow position:
               
chr13:9246951-9246750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
23, 138
               

               
Conread position:
               
221-425
               

               
Cow position:
               
chr13:46501541-46501329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
221-437
               

               
Cow position:
               
chr13:46311799-46312008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
7, 33
               

               
Conread position:
               
221-443
               

               
Cow position:
               
chr13:2339666-2339442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
7, 30
               

               
Conread position:
               
221-450
               

               
Cow position:
               
chr13:54331256-54331025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
7, 180
               

               
Conread position:
               
221-452
               

               
Cow position:
               
chr13:2884290-2884046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
7, 67
               

               
Conread position:
               
221-497
               

               
Cow position:
               
chr13:12682304-12682584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 183
               

               
Conread position:
               
221-539
               

               
Cow position:
               
chr13:38283747-38284058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 163
               

               
Conread position:
               
221-540
               

               
Cow position:
               
chr13:12977799-12977494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
7, 26
               

               
Conread position:
               
221-540
               

               
Cow position:
               
chr13:34035605-34035286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
7, 194
               

               
Conread position:
               
221-540
               

               
Cow position:
               
chr13:42200855-42200538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 169
               

               
Conread position:
               
221-540
               

               
Cow position:
               
chr13:52637519-52637220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
7, 136
               

               
Conread position:
               
221-542
               

               
Cow position:
               
chr13:8524384-8524701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 155
               

               
Conread position:
               
221-542
               

               
Cow position:
               
chr13:23479266-23478947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 79
               

               
Conread position:
               
221-542
               

               
Cow position:
               
chr13:53536069-53536391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
7, 30
               

               
Conread position:
               
221-543
               

               
Cow position:
               
chr13:21176087-21176406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 50
               

               
Conread position:
               
221-549
               

               
Cow position:
               
chr13:13176886-13176560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 67
               

               
Conread position:
               
221-551
               

               
Cow position:
               
chr13:33631357-33631037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
7, 139
               

               
Conread position:
               
224-464
               

               
Cow position:
               
chr13:17816004-17815759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
83, 217
               

               
Conread position:
               
224-542
               

               
Cow position:
               
chr13:16015040-16014728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 85
               

               
Conread position:
               
225-542
               

               
Cow position:
               
chr13:12207275-12206965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
91, 207
               

               
Conread position:
               
226-410
               

               
Cow position:
               
chr13:51821661-51821847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
94, 118
               

               
Conread position:
               
226-537
               

               
Cow position:
               
chr13:57002963-57002648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
17, 215
               

               
Conread position:
               
227-443
               

               
Cow position:
               
chr13:43629546-43629767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
124, 96
               

               
Conread position:
               
227-452
               

               
Cow position:
               
chr13:37795663-37795448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
227-541
               

               
Cow position:
               
chr13:46736431-46736133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
77, 65
               

               
Conread position:
               
229-398
               

               
Cow position:
               
chr13:20597551-20597716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
230-487
               

               
Cow position:
               
chr13:20041734-20041998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
76, 188
               

               
Conread position:
               
231-450
               

               
Cow position:
               
chr13:20530914-20531144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
23, 177
               

               
Conread position:
               
231-503
               

               
Cow position:
               
chr13:18215653-18215399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
13, 132
               

               
Conread position:
               
231-540
               

               
Cow position:
               
chr13:7059701-7059381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 227
               

               
Conread position:
               
231-540
               

               
Cow position:
               
chr13:20509958-20509653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
87, 167
               

               
Conread position:
               
232-443
               

               
Cow position:
               
chr13:24373627-24373420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
126, 89
               

               
Conread position:
               
232-447
               

               
Cow position:
               
chr13:30510284-30510062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
87, 134
               

               
Conread position:
               
232-474
               

               
Cow position:
               
chr13:562913-563158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
67, 205
               

               
Conread position:
               
232-538
               

               
Cow position:
               
chr13:8201262-8201562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
87, 18
               

               
Conread position:
               
232-542
               

               
Cow position:
               
chr13:43762390-43762085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 0
               

               
Conread position:
               
233-435
               

               
Cow position:
               
chr13:14227151-14226949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
87, 143
               

               
Conread position:
               
233-448
               

               
Cow position:
               
chr13:60487232-60487458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
233-449
               

               
Cow position:
               
chr13:54345001-54344773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
233-474
               

               
Cow position:
               
chr13:6975566-6975810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
80, 176
               

               
Conread position:
               
233-491
               

               
Cow position:
               
chr13:18351065-18350799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
11, 67
               

               
Conread position:
               
233-538
               

               
Cow position:
               
chr13:15958845-15958535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
90, 205
               

               
Conread position:
               
233-538
               

               
Cow position:
               
chr13:36877296-36876981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
87, 179
               

               
Conread position:
               
233-540
               

               
Cow position:
               
chr13:44626604-44626287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
79, 178
               

               
Conread position:
               
233-542
               

               
Cow position:
               
chr13:12233232-12233536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
11, 131
               

               
Conread position:
               
233-542
               

               
Cow position:
               
chr13:24586271-24585964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 162
               

               
Conread position:
               
233-547
               

               
Cow position:
               
chr13:15281713-15282023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
62, 20
               

               
Conread position:
               
234-388
               

               
Cow position:
               
chr13:27985206-27985364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
234-403
               

               
Cow position:
               
chr13:37947788-37947953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
97, 35
               

               
Conread position:
               
234-405
               

               
Cow position:
               
chr13:57323677-57323502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
87, 32
               

               
Conread position:
               
234-410
               

               
Cow position:
               
chr13:1558309-1558483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
103, 78
               

               
Conread position:
               
234-410
               

               
Cow position:
               
chr13:52178321-52178149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
82, 96
               

               
Conread position:
               
234-424
               

               
Cow position:
               
chr13:17994149-17993958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
68, 121
               

               
Conread position:
               
234-432
               

               
Cow position:
               
chr13:5713517-5713321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
234-432
               

               
Cow position:
               
chr13:48944884-48944691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
117, 68
               

               
Conread position:
               
234-433
               

               
Cow position:
               
chr13:37980424-37980618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
122, 69
               

               
Conread position:
               
234-435
               

               
Cow position:
               
chr13:60599719-60599923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
234-436
               

               
Cow position:
               
chr13:30651398-30651194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
89, 57
               

               
Conread position:
               
234-436
               

               
Cow position:
               
chr13:32949780-32949986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
79, 166
               

               
Conread position:
               
234-436
               

               
Cow position:
               
chr13:34556109-34556319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
10, 201
               

               
Conread position:
               
234-439
               

               
Cow position:
               
chr13:48251769-48251973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
117, 80
               

               
Conread position:
               
234-440
               

               
Cow position:
               
chr13:22886769-22886983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
234-440
               

               
Cow position:
               
chr13:35718911-35719126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
70, 170
               

               
Conread position:
               
234-441
               

               
Cow position:
               
chr13:8195305-8195105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
82, 123
               

               
Conread position:
               
234-443
               

               
Cow position:
               
chr13:1780056-1779836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
234-443
               

               
Cow position:
               
chr13:18551671-18551454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
234-443
               

               
Cow position:
               
chr13:50823333-50823542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
85, 27
               

               
Conread position:
               
234-446
               

               
Cow position:
               
chr13:20814057-20814277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
79, 127
               

               
Conread position:
               
234-446
               

               
Cow position:
               
chr13:20816536-20816316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
79, 127
               

               
Conread position:
               
234-449
               

               
Cow position:
               
chr13:21210085-21209863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
77, 156
               

               
Conread position:
               
234-450
               

               
Cow position:
               
chr13:39460010-39459802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
10, 62
               

               
Conread position:
               
234-452
               

               
Cow position:
               
chr13:32717652-32717873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
86, 127
               

               
Conread position:
               
234-453
               

               
Cow position:
               
chr13:15172184-15172412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
234-453
               

               
Cow position:
               
chr13:16292769-16292538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
88, 185
               

               
Conread position:
               
234-454
               

               
Cow position:
               
chr13:20536723-20536503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
80, 70
               

               
Conread position:
               
234-457
               

               
Cow position:
               
chr13:32773585-32773363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
87, 141
               

               
Conread position:
               
234-457
               

               
Cow position:
               
chr13:54418455-54418226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
82, 146
               

               
Conread position:
               
234-464
               

               
Cow position:
               
chr13:38691316-38691555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
10, 132
               

               
Conread position:
               
234-466
               

               
Cow position:
               
chr13:49283120-49283361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
74, 27
               

               
Conread position:
               
234-470
               

               
Cow position:
               
chr13:14544345-14544105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
85, 198
               

               
Conread position:
               
234-474
               

               
Cow position:
               
chr13:54237569-54237338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
234-488
               

               
Cow position:
               
chr13:17886724-17886476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
87, 112
               

               
Conread position:
               
234-488
               

               
Cow position:
               
chr13:54093963-54093716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 108
               

               
Conread position:
               
234-491
               

               
Cow position:
               
chr13:20378114-20378371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
72, 192
               

               
Conread position:
               
234-497
               

               
Cow position:
               
chr13:19178499-19178234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
86, 224
               

               
Conread position:
               
234-497
               

               
Cow position:
               
chr13:21155266-21155532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
87, 203
               

               
Conread position:
               
234-511
               

               
Cow position:
               
chr13:33517701-33517975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
86, 123
               

               
Conread position:
               
234-516
               

               
Cow position:
               
chr13:37521157-37521433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 204
               

               
Conread position:
               
234-518
               

               
Cow position:
               
chr13:30693924-30693655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 79
               

               
Conread position:
               
234-522
               

               
Cow position:
               
chr13:17800295-17800009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 145
               

               
Conread position:
               
234-531
               

               
Cow position:
               
chr13:8838771-8839062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
86, 163
               

               
Conread position:
               
234-532
               

               
Cow position:
               
chr13:25531565-25531863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 209
               

               
Conread position:
               
234-533
               

               
Cow position:
               
chr13:41918939-41919230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
85, 50
               

               
Conread position:
               
234-534
               

               
Cow position:
               
chr13:18852299-18852005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 92
               

               
Conread position:
               
234-535
               

               
Cow position:
               
chr13:12990070-12989774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 192
               

               
Conread position:
               
234-535
               

               
Cow position:
               
chr13:21039375-21039675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 211
               

               
Conread position:
               
234-536
               

               
Cow position:
               
chr13:51528223-51528520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 140
               

               
Conread position:
               
234-538
               

               
Cow position:
               
chr13:7010692-7010392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
85, 148
               

               
Conread position:
               
234-538
               

               
Cow position:
               
chr13:9593730-9593426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 206
               

               
Conread position:
               
234-538
               

               
Cow position:
               
chr13:17114157-17114458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 39
               

               
Conread position:
               
234-538
               

               
Cow position:
               
chr13:20180620-20180334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
127, 45
               

               
Conread position:
               
234-538
               

               
Cow position:
               
chr13:26261571-26261867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
85, 209
               

               
Conread position:
               
234-538
               

               
Cow position:
               
chr13:34261455-34261152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
86, 207
               

               
Conread position:
               
234-538
               

               
Cow position:
               
chr13:37069572-37069266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 184
               

               
Conread position:
               
234-538
               

               
Cow position:
               
chr13:42860347-42860649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
80, 127
               

               
Conread position:
               
234-538
               

               
Cow position:
               
chr13:44202212-44201928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
85, 149
               

               
Conread position:
               
234-538
               

               
Cow position:
               
chr13:47863476-47863782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
29, 150
               

               
Conread position:
               
234-539
               

               
Cow position:
               
chr13:7076479-7076177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
63, 151
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr13:1155485-1155784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
82, 139
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr13:13306329-13306015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
37, 220
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr13:15622030-15621729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
69, 39
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr13:15872672-15872360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
79, 278
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr13:18989928-18989641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr13:19023616-19023929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
41, 153
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr13:20563220-20562912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
72, 209
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr13:20879612-20879905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
71, 27
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr13:31808735-31808440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
82, 103
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr13:40652156-40651853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
84, 123
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr13:45604195-45604497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
84, 144
               

               
Conread position:
               
234-541
               

               
Cow position:
               
chr13:15446269-15445953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
60, 111
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr13:11096395-11096097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
117, 94
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr13:15192671-15192969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 0
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr13:15288703-15289004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 34
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr13:17021497-17021808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 208
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr13:17439543-17439851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 208
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr13:17977551-17977270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr13:18166953-18166649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 195
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr13:18244079-18243779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 88
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr13:20784811-20784507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 149
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr13:21241869-21242167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 150
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr13:25062633-25062330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
86, 180
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr13:34263150-34263453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 0
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr13:37818537-37818834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 19
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr13:38277914-38278231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
86, 289
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr13:43194398-43194086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
77, 165
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr13:47963978-47964264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
88, 43
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr13:55673982-55674291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 197
               

               
Conread position:
               
234-545
               

               
Cow position:
               
chr13:35659976-35659674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 211
               

               
Conread position:
               
234-545
               

               
Cow position:
               
chr13:38329853-38329530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
234-545
               

               
Cow position:
               
chr13:55315966-55316277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 215
               

               
Conread position:
               
234-546
               

               
Cow position:
               
chr13:6189407-6189688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
206, 68
               

               
Conread position:
               
234-546
               

               
Cow position:
               
chr13:11061210-11060901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
46, 210
               

               
Conread position:
               
234-546
               

               
Cow position:
               
chr13:33352144-33352434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
72, 110
               

               
Conread position:
               
234-547
               

               
Cow position:
               
chr13:48037843-48037535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 202
               

               
Conread position:
               
234-551
               

               
Cow position:
               
chr13:12875762-12876067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
114, 58
               

               
Conread position:
               
234-552
               

               
Cow position:
               
chr13:311653-311345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
67, 204
               

               
Conread position:
               
234-552
               

               
Cow position:
               
chr13:7663206-7663515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
10, 17
               

               
Conread position:
               
234-552
               

               
Cow position:
               
chr13:11260475-11260182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
116, 17
               

               
Conread position:
               
234-552
               

               
Cow position:
               
chr13:13261231-13260910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 213
               

               
Conread position:
               
234-552
               

               
Cow position:
               
chr13:13501399-13501711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 20
               

               
Conread position:
               
234-552
               

               
Cow position:
               
chr13:17291908-17292224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 12
               

               
Conread position:
               
234-552
               

               
Cow position:
               
chr13:23856438-23856118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 39
               

               
Conread position:
               
234-552
               

               
Cow position:
               
chr13:26479991-26480297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
77, 145
               

               
Conread position:
               
235-396
               

               
Cow position:
               
chr13:50681586-50681753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
235-408
               

               
Cow position:
               
chr13:33054172-33054350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
9, 41
               

               
Conread position:
               
235-540
               

               
Cow position:
               
chr13:59170880-59170572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
19, 70
               

               
Conread position:
               
235-542
               

               
Cow position:
               
chr13:17821037-17821353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 212
               

               
Conread position:
               
235-552
               

               
Cow position:
               
chr13:34281902-34281586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 205
               

               
Conread position:
               
236-366
               

               
Cow position:
               
chr13:8779616-8779481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
236-410
               

               
Cow position:
               
chr13:38485052-38484874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
236-415
               

               
Cow position:
               
chr13:37985529-37985721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
236-425
               

               
Cow position:
               
chr13:35653871-35654064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
84, 107
               

               
Conread position:
               
236-432
               

               
Cow position:
               
chr13:32017301-32017505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
236-432
               

               
Cow position:
               
chr13:61170494-61170700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
64, 68
               

               
Conread position:
               
236-444
               

               
Cow position:
               
chr13:11834263-11834469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
123, 26
               

               
Conread position:
               
236-457
               

               
Cow position:
               
chr13:24539717-24539482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
236-469
               

               
Cow position:
               
chr13:16155496-16155728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
77, 172
               

               
Conread position:
               
236-474
               

               
Cow position:
               
chr13:43839324-43839558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
37, 143
               

               
Conread position:
               
236-490
               

               
Cow position:
               
chr13:22775090-22775329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
236-490
               

               
Cow position:
               
chr13:22780167-22779930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
236-493
               

               
Cow position:
               
chr13:24060129-24060370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
236-497
               

               
Cow position:
               
chr13:22115925-22115655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
117, 76
               

               
Conread position:
               
236-497
               

               
Cow position:
               
chr13:24155762-24155491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
117, 76
               

               
Conread position:
               
236-497
               

               
Cow position:
               
chr13:52285037-52284770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
61, 160
               

               
Conread position:
               
236-523
               

               
Cow position:
               
chr13:16024810-16024525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
71, 48
               

               
Conread position:
               
236-528
               

               
Cow position:
               
chr13:9587362-9587658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
76, 177
               

               
Conread position:
               
236-531
               

               
Cow position:
               
chr13:41253836-41253549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
84, 33
               

               
Conread position:
               
236-531
               

               
Cow position:
               
chr13:49805196-49804903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
85, 200
               

               
Conread position:
               
236-531
               

               
Cow position:
               
chr13:55295404-55295698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 200
               

               
Conread position:
               
236-534
               

               
Cow position:
               
chr13:43594894-43595183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
84, 136
               

               
Conread position:
               
236-535
               

               
Cow position:
               
chr13:36352749-36353033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
66, 83
               

               
Conread position:
               
236-537
               

               
Cow position:
               
chr13:17970813-17971108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
236-537
               

               
Cow position:
               
chr13:20270994-20271303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
77, 214
               

               
Conread position:
               
236-538
               

               
Cow position:
               
chr13:58043850-58043549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
79, 121
               

               
Conread position:
               
236-540
               

               
Cow position:
               
chr13:9643661-9643968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
83, 169
               

               
Conread position:
               
236-540
               

               
Cow position:
               
chr13:12045113-12045419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
57, 14
               

               
Conread position:
               
236-540
               

               
Cow position:
               
chr13:12202586-12202281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 95
               

               
Conread position:
               
236-540
               

               
Cow position:
               
chr13:12408062-12408370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
77, 206
               

               
Conread position:
               
236-540
               

               
Cow position:
               
chr13:20649762-20650068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 203
               

               
Conread position:
               
236-540
               

               
Cow position:
               
chr13:23166875-23167182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 203
               

               
Conread position:
               
236-540
               

               
Cow position:
               
chr13:60429857-60430159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 199
               

               
Conread position:
               
236-541
               

               
Cow position:
               
chr13:20466071-20466367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
141, 75
               

               
Conread position:
               
236-541
               

               
Cow position:
               
chr13:42229549-42229230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
83, 293
               

               
Conread position:
               
236-541
               

               
Cow position:
               
chr13:53566818-53566519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 24
               

               
Conread position:
               
236-542
               

               
Cow position:
               
chr13:6060786-6061091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 181
               

               
Conread position:
               
236-542
               

               
Cow position:
               
chr13:11954892-11955200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 120
               

               
Conread position:
               
236-542
               

               
Cow position:
               
chr13:41806997-41806689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 37
               

               
Conread position:
               
236-542
               

               
Cow position:
               
chr13:45726101-45725809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
121, 39
               

               
Conread position:
               
236-542
               

               
Cow position:
               
chr13:57493962-57494272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 187
               

               
Conread position:
               
236-544
               

               
Cow position:
               
chr13:19882814-19883121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 102
               

               
Conread position:
               
236-547
               

               
Cow position:
               
chr13:46182009-46181704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 14
               

               
Conread position:
               
236-552
               

               
Cow position:
               
chr13:2774347-2774034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
11, 73
               

               
Conread position:
               
236-552
               

               
Cow position:
               
chr13:13089245-13088936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 137
               

               
Conread position:
               
236-552
               

               
Cow position:
               
chr13:15884792-15885115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 212
               

               
Conread position:
               
236-552
               

               
Cow position:
               
chr13:56148761-56148428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
74, 21
               

               
Conread position:
               
236-552
               

               
Cow position:
               
chr13:56160206-56160539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
77, 21
               

               
Conread position:
               
237-349
               

               
Cow position:
               
chr13:59963-60080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
237-362
               

               
Cow position:
               
chr13:46329247-46329376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
237-392
               

               
Cow position:
               
chr13:14220689-14220535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
237-401
               

               
Cow position:
               
chr13:46298421-46298595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
237-407
               

               
Cow position:
               
chr13:11290600-11290774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
47, 121
               

               
Conread position:
               
237-429
               

               
Cow position:
               
chr13:6606801-6606999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
82, 133
               

               
Conread position:
               
237-429
               

               
Cow position:
               
chr13:60690502-60690704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
237-430
               

               
Cow position:
               
chr13:59687659-59687858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
237-432
               

               
Cow position:
               
chr13:24776511-24776303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
40, 142
               

               
Conread position:
               
237-440
               

               
Cow position:
               
chr13:21904882-21904675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
237-441
               

               
Cow position:
               
chr13:60329970-60329765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
92, 147
               

               
Conread position:
               
237-444
               

               
Cow position:
               
chr13:13465570-13465770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
75, 145
               

               
Conread position:
               
237-445
               

               
Cow position:
               
chr13:39948199-39948413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
75, 90
               

               
Conread position:
               
237-448
               

               
Cow position:
               
chr13:3003667-3003448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
76, 208
               

               
Conread position:
               
237-448
               

               
Cow position:
               
chr13:11767822-11768037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
82, 154
               

               
Conread position:
               
237-470
               

               
Cow position:
               
chr13:58389237-58389012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
85, 49
               

               
Conread position:
               
237-471
               

               
Cow position:
               
chr13:9884988-9884756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
82, 141
               

               
Conread position:
               
237-474
               

               
Cow position:
               
chr13:4866761-4866986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
167, 34
               

               
Conread position:
               
237-486
               

               
Cow position:
               
chr13:9107797-9107561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
113, 74
               

               
Conread position:
               
237-487
               

               
Cow position:
               
chr13:25261588-25261840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
84, 153
               

               
Conread position:
               
237-491
               

               
Cow position:
               
chr13:46284400-46284650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
45, 87
               

               
Conread position:
               
237-497
               

               
Cow position:
               
chr13:30026332-30026071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 211
               

               
Conread position:
               
237-500
               

               
Cow position:
               
chr13:47216032-47216298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
76, 206
               

               
Conread position:
               
237-507
               

               
Cow position:
               
chr13:20683166-20682901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
82, 49
               

               
Conread position:
               
237-510
               

               
Cow position:
               
chr13:20880707-20880981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 195
               

               
Conread position:
               
237-528
               

               
Cow position:
               
chr13:35525997-35526270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
237-529
               

               
Cow position:
               
chr13:17745459-17745173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 146
               

               
Conread position:
               
237-531
               

               
Cow position:
               
chr13:24376710-24376421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 148
               

               
Conread position:
               
237-538
               

               
Cow position:
               
chr13:1959229-1958928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
70, 143
               

               
Conread position:
               
237-540
               

               
Cow position:
               
chr13:8362526-8362824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
65, 172
               

               
Conread position:
               
237-540
               

               
Cow position:
               
chr13:8609327-8609628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
50, 120
               

               
Conread position:
               
237-540
               

               
Cow position:
               
chr13:10924687-10925002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
79, 31
               

               
Conread position:
               
237-540
               

               
Cow position:
               
chr13:15041252-15041554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
83, 203
               

               
Conread position:
               
237-540
               

               
Cow position:
               
chr13:15974831-15974537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
9, 196
               

               
Conread position:
               
237-540
               

               
Cow position:
               
chr13:37592715-37593028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
15, 210
               

               
Conread position:
               
237-540
               

               
Cow position:
               
chr13:40491453-40491134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
85, 217
               

               
Conread position:
               
237-540
               

               
Cow position:
               
chr13:45022988-45023290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 185
               

               
Conread position:
               
237-540
               

               
Cow position:
               
chr13:47356847-47356570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
22, 10
               

               
Conread position:
               
237-542
               

               
Cow position:
               
chr13:3315454-3315758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
82, 111
               

               
Conread position:
               
237-542
               

               
Cow position:
               
chr13:6086680-6086976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
82, 130
               

               
Conread position:
               
237-542
               

               
Cow position:
               
chr13:6153560-6153867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 10
               

               
Conread position:
               
237-542
               

               
Cow position:
               
chr13:9665295-9664976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
49, 225
               

               
Conread position:
               
237-542
               

               
Cow position:
               
chr13:13320996-13320714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 36
               

               
Conread position:
               
237-542
               

               
Cow position:
               
chr13:18491814-18491513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 36
               

               
Conread position:
               
237-542
               

               
Cow position:
               
chr13:24369804-24369499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 154
               

               
Conread position:
               
237-542
               

               
Cow position:
               
chr13:32657586-32657883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
120, 48
               

               
Conread position:
               
237-542
               

               
Cow position:
               
chr13:37382030-37381718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
66, 210
               

               
Conread position:
               
237-542
               

               
Cow position:
               
chr13:43868898-43869196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
34, 128
               

               
Conread position:
               
237-542
               

               
Cow position:
               
chr13:52879632-52879319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
76, 153
               

               
Conread position:
               
237-543
               

               
Cow position:
               
chr13:34728617-34728926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
83, 219
               

               
Conread position:
               
237-543
               

               
Cow position:
               
chr13:44323122-44322811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 164
               

               
Conread position:
               
237-544
               

               
Cow position:
               
chr13:21107344-21107058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
237-545
               

               
Cow position:
               
chr13:10845813-10845518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
77, 132
               

               
Conread position:
               
237-552
               

               
Cow position:
               
chr13:19393507-19393199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
76, 123
               

               
Conread position:
               
237-552
               

               
Cow position:
               
chr13:25547373-25547676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
307, 86
               

               
Conread position:
               
238-406
               

               
Cow position:
               
chr13:4038099-4037926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
82, 151
               

               
Conread position:
               
238-411
               

               
Cow position:
               
chr13:37497537-37497707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
238-432
               

               
Cow position:
               
chr13:46458841-46458643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
75, 119
               

               
Conread position:
               
238-446
               

               
Cow position:
               
chr13:27027549-27027769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
238-463
               

               
Cow position:
               
chr13:37945997-37946218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
118, 50
               

               
Conread position:
               
238-523
               

               
Cow position:
               
chr13:2463010-2463299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
44, 39
               

               
Conread position:
               
238-526
               

               
Cow position:
               
chr13:52922307-52922031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
58, 70
               

               
Conread position:
               
238-530
               

               
Cow position:
               
chr13:4464226-4463941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
72, 141
               

               
Conread position:
               
238-538
               

               
Cow position:
               
chr13:5278970-5279281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
238-538
               

               
Cow position:
               
chr13:17347026-17346731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
75, 188
               

               
Conread position:
               
238-539
               

               
Cow position:
               
chr13:27525042-27525341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 200
               

               
Conread position:
               
238-540
               

               
Cow position:
               
chr13:11460844-11460552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 145
               

               
Conread position:
               
238-540
               

               
Cow position:
               
chr13:17004373-17004674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
82, 51
               

               
Conread position:
               
238-540
               

               
Cow position:
               
chr13:19364463-19364159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
75, 146
               

               
Conread position:
               
238-540
               

               
Cow position:
               
chr13:52894363-52894066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
82, 169
               

               
Conread position:
               
238-541
               

               
Cow position:
               
chr13:14063307-14063603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 13
               

               
Conread position:
               
238-541
               

               
Cow position:
               
chr13:52585801-52586119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
238-541
               

               
Cow position:
               
chr13:56686646-56686352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
238-542
               

               
Cow position:
               
chr13:15234131-15233843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 133
               

               
Conread position:
               
238-542
               

               
Cow position:
               
chr13:23667482-23667170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
31, 129
               

               
Conread position:
               
238-542
               

               
Cow position:
               
chr13:34375478-34375176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
78, 33
               

               
Conread position:
               
238-542
               

               
Cow position:
               
chr13:34995107-34995412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
81, 143
               

               
Conread position:
               
238-542
               

               
Cow position:
               
chr13:43919036-43919344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
37, 201
               

               
Conread position:
               
238-542
               

               
Cow position:
               
chr13:45073716-45073997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
238-542
               

               
Cow position:
               
chr13:47007517-47007802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
238-552
               

               
Cow position:
               
chr13:9974849-9975169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
73, 202
               

               
Conread position:
               
238-552
               

               
Cow position:
               
chr13:56154942-56155244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 68
               

               
Conread position:
               
239-350
               

               
Cow position:
               
chr13:14576887-14576773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
81, 11
               

               
Conread position:
               
239-381
               

               
Cow position:
               
chr13:27017168-27017311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
239-437
               

               
Cow position:
               
chr13:15349052-15349240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
67, 49
               

               
Conread position:
               
239-439
               

               
Cow position:
               
chr13:46985230-46985030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
46, 53
               

               
Conread position:
               
239-462
               

               
Cow position:
               
chr13:38012579-38012350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
80, 185
               

               
Conread position:
               
239-494
               

               
Cow position:
               
chr13:5752205-5752463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
67, 213
               

               
Conread position:
               
239-537
               

               
Cow position:
               
chr13:19033764-19033480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
141, 64
               

               
Conread position:
               
239-540
               

               
Cow position:
               
chr13:19610358-19610645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
239-541
               

               
Cow position:
               
chr13:58525140-58524849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
140, 53
               

               
Conread position:
               
239-542
               

               
Cow position:
               
chr13:12283056-12282742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
239-542
               

               
Cow position:
               
chr13:60974296-60973996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 62
               

               
Conread position:
               
239-552
               

               
Cow position:
               
chr13:37981534-37981837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
96, 82
               

               
Conread position:
               
240-373
               

               
Cow position:
               
chr13:26098362-26098225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
240-385
               

               
Cow position:
               
chr13:21524646-21524493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
240-426
               

               
Cow position:
               
chr13:15162448-15162625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
120, 69
               

               
Conread position:
               
240-436
               

               
Cow position:
               
chr13:8202665-8202860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
76, 117
               

               
Conread position:
               
240-495
               

               
Cow position:
               
chr13:47313124-47312881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
205, 54
               

               
Conread position:
               
240-511
               

               
Cow position:
               
chr13:20440382-20440633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
10, 62
               

               
Conread position:
               
240-540
               

               
Cow position:
               
chr13:12546688-12546989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
66, 197
               

               
Conread position:
               
240-540
               

               
Cow position:
               
chr13:45353263-45352950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
240-542
               

               
Cow position:
               
chr13:51940948-51940651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
241-521
               

               
Cow position:
               
chr13:2192924-2192649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
87, 77
               

               
Conread position:
               
241-538
               

               
Cow position:
               
chr13:32535871-32535577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
134, 197
               

               
Conread position:
               
242-453
               

               
Cow position:
               
chr13:53195077-53195297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
242-541
               

               
Cow position:
               
chr13:15528816-15529118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 13
               

               
Conread position:
               
242-552
               

               
Cow position:
               
chr13:15257163-15257460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
77, 88
               

               
Conread position:
               
243-534
               

               
Cow position:
               
chr13:13577814-13578109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
7, 45
               

               
Conread position:
               
244-540
               

               
Cow position:
               
chr13:32283340-32283047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
77, 45
               

               
Conread position:
               
245-441
               

               
Cow position:
               
chr13:6894306-6894105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
66, 195
               

               
Conread position:
               
245-537
               

               
Cow position:
               
chr13:2414238-2413951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 191
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr13:37521520-37521825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
75, 185
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr13:52227888-52228181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
71, 190
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr13:60341026-60340725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
68, 181
               

               
Conread position:
               
245-542
               

               
Cow position:
               
chr13:13765980-13765707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
245-542
               

               
Cow position:
               
chr13:37804091-37803808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
86, 39
               

               
Conread position:
               
245-552
               

               
Cow position:
               
chr13:31814079-31813783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
246-403
               

               
Cow position:
               
chr13:43139014-43139177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
69, 92
               

               
Conread position:
               
246-540
               

               
Cow position:
               
chr13:34941445-34941731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
74, 119
               

               
Conread position:
               
247-429
               

               
Cow position:
               
chr13:23816541-23816727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
49, 133
               

               
Conread position:
               
247-441
               

               
Cow position:
               
chr13:51108701-51108502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
104, 197
               

               
Conread position:
               
247-442
               

               
Cow position:
               
chr13:6945583-6945378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
247-453
               

               
Cow position:
               
chr13:51014970-51015195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
247-486
               

               
Cow position:
               
chr13:20863808-20864043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
67, 26
               

               
Conread position:
               
247-538
               

               
Cow position:
               
chr13:29631070-29630777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
12, 139
               

               
Conread position:
               
247-539
               

               
Cow position:
               
chr13:40943458-40943163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 185
               

               
Conread position:
               
247-542
               

               
Cow position:
               
chr13:6974370-6974078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
74, 51
               

               
Conread position:
               
247-542
               

               
Cow position:
               
chr13:20666176-20666469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 96
               

               
Conread position:
               
248-497
               

               
Cow position:
               
chr13:16833869-16834113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
103, 42
               

               
Conread position:
               
248-529
               

               
Cow position:
               
chr13:19426489-19426768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
72, 182
               

               
Conread position:
               
248-535
               

               
Cow position:
               
chr13:54095015-54094734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
248-542
               

               
Cow position:
               
chr13:152160-151880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 154
               

               
Conread position:
               
249-463
               

               
Cow position:
               
chr13:11147514-11147291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
249-540
               

               
Cow position:
               
chr13:13339072-13338775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
72, 185
               

               
Conread position:
               
250-540
               

               
Cow position:
               
chr13:46525235-46525507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
48, 154
               

               
Conread position:
               
250-542
               

               
Cow position:
               
chr13:52057746-52057474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
250-552
               

               
Cow position:
               
chr13:48598111-48597815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
101, 70
               

               
Conread position:
               
251-542
               

               
Cow position:
               
chr13:19022484-19022188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 54
               

               
Conread position:
               
251-542
               

               
Cow position:
               
chr13:46112173-46111886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
69, 187
               

               
Conread position:
               
251-545
               

               
Cow position:
               
chr13:11808751-11808491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
252-542
               

               
Cow position:
               
chr13:22085546-22085829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
253-507
               

               
Cow position:
               
chr13:57475213-57475466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
66, 10
               

               
Conread position:
               
253-540
               

               
Cow position:
               
chr13:19223853-19223574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
68, 195
               

               
Conread position:
               
255-441
               

               
Cow position:
               
chr13:24280448-24280259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
32, 127
               

               
Conread position:
               
256-421
               

               
Cow position:
               
chr13:60393498-60393669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
256-449
               

               
Cow position:
               
chr13:4423279-4423483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
65, 43
               

               
Conread position:
               
256-538
               

               
Cow position:
               
chr13:1170669-1170383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
72, 60
               

               
Conread position:
               
256-540
               

               
Cow position:
               
chr13:547689-547412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
58, 43
               

               
Conread position:
               
256-540
               

               
Cow position:
               
chr13:61188736-61188452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
68, 33
               

               
Conread position:
               
256-542
               

               
Cow position:
               
chr13:15167024-15166735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 189
               

               
Conread position:
               
256-542
               

               
Cow position:
               
chr13:61990133-61990408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
65, 185
               

               
Conread position:
               
257-440
               

               
Cow position:
               
chr13:2302638-2302829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
68, 23
               

               
Conread position:
               
257-540
               

               
Cow position:
               
chr13:52749288-52749551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
100, 16
               

               
Conread position:
               
257-542
               

               
Cow position:
               
chr13:24230413-24230131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
26, 179
               

               
Conread position:
               
258-540
               

               
Cow position:
               
chr13:23512558-23512289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
103, 45
               

               
Conread position:
               
258-540
               

               
Cow position:
               
chr13:26369725-26369443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
61, 179
               

               
Conread position:
               
258-541
               

               
Cow position:
               
chr13:17158672-17158960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
63, 184
               

               
Conread position:
               
260-535
               

               
Cow position:
               
chr13:24715439-24715165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
53, 180
               

               
Conread position:
               
260-540
               

               
Cow position:
               
chr13:8652240-8652523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
16, 64
               

               
Conread position:
               
262-541
               

               
Cow position:
               
chr13:48165234-48165508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
263-435
               

               
Cow position:
               
chr13:47186418-47186241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
263-471
               

               
Cow position:
               
chr13:21189476-21189263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
12, 180
               

               
Conread position:
               
263-540
               

               
Cow position:
               
chr13:27493660-27493938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
67, 18
               

               
Conread position:
               
265-435
               

               
Cow position:
               
chr13:5079033-5079205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
54, 15
               

               
Conread position:
               
266-542
               

               
Cow position:
               
chr13:15991031-15991313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
56, 181
               

               
Conread position:
               
266-552
               

               
Cow position:
               
chr13:21283515-21283797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
46, 128
               

               
Conread position:
               
267-540
               

               
Cow position:
               
chr13:9846264-9846543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
53, 24
               

               
Conread position:
               
267-552
               

               
Cow position:
               
chr13:53574157-53573876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
59, 8
               

               
Conread position:
               
268-540
               

               
Cow position:
               
chr13:14771650-14771371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
46, 168
               

               
Conread position:
               
270-420
               

               
Cow position:
               
chr13:2404930-2404772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
270-464
               

               
Cow position:
               
chr13:36396981-36397184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
270-533
               

               
Cow position:
               
chr13:55583386-55583121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
52, 174
               

               
Conread position:
               
270-539
               

               
Cow position:
               
chr13:9803254-9802987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
94, 186
               

               
Conread position:
               
272-542
               

               
Cow position:
               
chr13:5671416-5671669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
272-542
               

               
Cow position:
               
chr13:12618924-12619199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 170
               

               
Conread position:
               
273-543
               

               
Cow position:
               
chr13:6540129-6540402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
33, 23
               

               
Conread position:
               
274-488
               

               
Cow position:
               
chr13:62474616-62474828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
47, 103
               

               
Conread position:
               
274-542
               

               
Cow position:
               
chr13:5082837-5082568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
47, 93
               

               
Conread position:
               
274-542
               

               
Cow position:
               
chr13:49503345-49503615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 69
               

               
Conread position:
               
276-435
               

               
Cow position:
               
chr13:39232658-39232817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
24, 41
               

               
Conread position:
               
276-450
               

               
Cow position:
               
chr13:966258-966078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
45, 114
               

               
Conread position:
               
279-540
               

               
Cow position:
               
chr13:17338612-17338348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
77, 207
               

               
Conread position:
               
279-540
               

               
Cow position:
               
chr13:19188482-19188220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
28, 170
               

               
Conread position:
               
279-542
               

               
Cow position:
               
chr13:5758167-5758425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 50
               

               
Conread position:
               
279-542
               

               
Cow position:
               
chr13:49022692-49022951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
35, 112
               

               
Conread position:
               
279-542
               

               
Cow position:
               
chr13:52055418-52055675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
34, 85
               

               
Conread position:
               
280-542
               

               
Cow position:
               
chr13:15110501-15110231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
40, 168
               

               
Conread position:
               
281-540
               

               
Cow position:
               
chr13:607085-607339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
42, 157
               

               
Conread position:
               
282-547
               

               
Cow position:
               
chr13:62518162-62518419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
32, 25
               

               
Conread position:
               
285-552
               

               
Cow position:
               
chr13:20473515-20473775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
36, 56
               

               
Conread position:
               
287-496
               

               
Cow position:
               
chr13:7790184-7789970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
31, 75
               

               
Conread position:
               
287-523
               

               
Cow position:
               
chr13:4420517-4420278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
27, 146
               

               
Conread position:
               
288-415
               

               
Cow position:
               
chr13:58743120-58743251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
288-541
               

               
Cow position:
               
chr13:29831265-29831513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
32, 16
               

               
Conread position:
               
289-439
               

               
Cow position:
               
chr13:22030256-22030103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
291-549
               

               
Cow position:
               
chr13:13954222-13954483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
29, 144
               

               
Conread position:
               
295-540
               

               
Cow position:
               
chr13:49507692-49507931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
57, 10
               

               
Conread position:
               
297-540
               

               
Cow position:
               
chr13:15194576-15194816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 16
               

               
Conread position:
               
300-432
               

               
Cow position:
               
chr13:48372757-48372893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
15, 98
               

               
Conread position:
               
300-542
               

               
Cow position:
               
chr13:1569079-1568849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
31, 137
               

               
Conread position:
               
303-540
               

               
Cow position:
               
chr13:18999696-18999454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
20, 96
               

               
Conread position:
               
304-541
               

               
Cow position:
               
chr13:25537785-25537541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
18, 140
               

               
Conread position:
               
305-515
               

               
Cow position:
               
chr13:28652947-28652747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
94, 74
               

               
Conread position:
               
305-540
               

               
Cow position:
               
chr13:18696990-18696759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
305-540
               

               
Cow position:
               
chr13:26698349-26698579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
68, 124
               

               
Conread position:
               
305-542
               

               
Cow position:
               
chr13:15903164-15902941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
305-542
               

               
Cow position:
               
chr13:54388873-54389104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
305-542
               

               
Cow position:
               
chr13:54583025-54582791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
68, 134
               

               
Conread position:
               
306-540
               

               
Cow position:
               
chr13:28689617-28689386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
15, 38
               

               
Conread position:
               
309-542
               

               
Cow position:
               
chr13:11381578-11381806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
311-543
               

               
Cow position:
               
chr13:20871532-20871300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
19, 29
               

               
Conread position:
               
312-511
               

               
Cow position:
               
chr13:47188584-47188384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
45, 11
               

               
Conread position:
               
312-534
               

               
Cow position:
               
chr13:20360411-20360204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
312-542
               

               
Cow position:
               
chr13:8374631-8374855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
312-542
               

               
Cow position:
               
chr13:18058108-18058333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
312-552
               

               
Cow position:
               
chr13:17966068-17966302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 121
               

               
Conread position:
               
313-521
               

               
Cow position:
               
chr13:6455508-6455313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
180, 22
               

               
Conread position:
               
313-542
               

               
Cow position:
               
chr13:17568959-17569184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
35, 114
               

               
Conread position:
               
314-540
               

               
Cow position:
               
chr13:11321477-11321698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
314-542
               

               
Cow position:
               
chr13:51115889-51116107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
316-542
               

               
Cow position:
               
chr13:20217251-20217481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
44, 131
               

               
Conread position:
               
321-528
               

               
Cow position:
               
chr13:10098859-10099056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
322-540
               

               
Cow position:
               
chr13:14878821-14879032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
322-540
               

               
Cow position:
               
chr13:28552727-28552507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
36, 126
               

               
Conread position:
               
322-542
               

               
Cow position:
               
chr13:48375514-48375716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
322-545
               

               
Cow position:
               
chr13:58763501-58763704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
322-550
               

               
Cow position:
               
chr13:2803599-2803380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
29, 6
               

               
Conread position:
               
323-485
               

               
Cow position:
               
chr13:6389510-6389355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
88, 118
               

               
Conread position:
               
323-531
               

               
Cow position:
               
chr13:32826324-32826529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
7, 113
               

               
Conread position:
               
323-538
               

               
Cow position:
               
chr13:12745801-12745592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
111, 51
               

               
Conread position:
               
323-540
               

               
Cow position:
               
chr13:6663621-6663833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
323-540
               

               
Cow position:
               
chr13:25381092-25380882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
28, 106
               

               
Conread position:
               
324-533
               

               
Cow position:
               
chr13:13238706-13238502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
324-538
               

               
Cow position:
               
chr13:21269451-21269661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
32, 104
               

               
Conread position:
               
324-540
               

               
Cow position:
               
chr13:1363823-1363613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
32, 105
               

               
Conread position:
               
324-540
               

               
Cow position:
               
chr13:6849059-6848845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
32, 89
               

               
Conread position:
               
324-540
               

               
Cow position:
               
chr13:25579058-25579271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
33, 62
               

               
Conread position:
               
324-550
               

               
Cow position:
               
chr13:11591875-11591664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
27, 72
               

               
Conread position:
               
325-541
               

               
Cow position:
               
chr13:15144244-15144448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
15, 59
               

               
Conread position:
               
326-540
               

               
Cow position:
               
chr13:18995256-18995045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
9, 121
               

               
Conread position:
               
326-549
               

               
Cow position:
               
chr13:14576334-14576123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
9, 74
               

               
Conread position:
               
328-527
               

               
Cow position:
               
chr13:626685-626489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
50, 106
               

               
Conread position:
               
329-552
               

               
Cow position:
               
chr13:20288454-20288245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
330-497
               

               
Cow position:
               
chr13:60375365-60375528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
332-542
               

               
Cow position:
               
chr13:34555711-34555911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
335-523
               

               
Cow position:
               
chr13:21135782-21135965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
335-540
               

               
Cow position:
               
chr13:27550857-27550658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
342-535
               

               
Cow position:
               
chr13:8402166-8401979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
38, 7
               

               
Conread position:
               
342-542
               

               
Cow position:
               
chr13:19279202-19279012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
342-542
               

               
Cow position:
               
chr13:19320646-19320449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
146, 95
               

               
Conread position:
               
342-542
               

               
Cow position:
               
chr13:47322293-47322493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
19, 93
               

               
Conread position:
               
342-552
               

               
Cow position:
               
chr13:56678126-56677922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
15, 42
               

               
Conread position:
               
345-540
               

               
Cow position:
               
chr13:50750946-50751137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
346-539
               

               
Cow position:
               
chr13:20155107-20154921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
24, 51
               

               
Conread position:
               
348-542
               

               
Cow position:
               
chr13:7265020-7265203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
61, 32
               

               
Conread position:
               
348-542
               

               
Cow position:
               
chr13:8355302-8355122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
350-539
               

               
Cow position:
               
chr13:47022462-47022285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
350-552
               

               
Cow position:
               
chr13:46329501-46329699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
351-535
               

               
Cow position:
               
chr13:52477544-52477723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
352-531
               

               
Cow position:
               
chr13:15964419-15964244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
354-542
               

               
Cow position:
               
chr13:21170629-21170443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
33, 12
               

               
Conread position:
               
355-537
               

               
Cow position:
               
chr13:3989301-3989119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
83, 72
               

               
Conread position:
               
355-542
               

               
Cow position:
               
chr13:16714164-16714348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
59, 126
               

               
Conread position:
               
356-537
               

               
Cow position:
               
chr13:54128496-54128675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
49, 72
               

               
Conread position:
               
357-541
               

               
Cow position:
               
chr13:20868659-20868833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
17, 54
               

               
Conread position:
               
359-540
               

               
Cow position:
               
chr13:18197509-18197689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
20, 82
               

               
Conread position:
               
360-537
               

               
Cow position:
               
chr13:11397366-11397527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
360-540
               

               
Cow position:
               
chr13:55727993-55727821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
361-540
               

               
Cow position:
               
chr13:16187806-16187977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
362-549
               

               
Cow position:
               
chr13:51901683-51901494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
132, 84
               

               
Conread position:
               
364-511
               

               
Cow position:
               
chr13:27199275-27199136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
365-541
               

               
Cow position:
               
chr13:48862008-48862177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
368-542
               

               
Cow position:
               
chr13:13196326-13196156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
71, 79
               

               
Conread position:
               
369-541
               

               
Cow position:
               
chr13:7149312-7149138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
64, 34
               

               
Conread position:
               
379-540
               

               
Cow position:
               
chr13:827316-827164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
379-542
               

               
Cow position:
               
chr13:9981767-9981923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
383-542
               

               
Cow position:
               
chr13:29123375-29123221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
122, 45
               

               
Conread position:
               
385-541
               

               
Cow position:
               
chr13:15757188-15757038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
389-552
               

               
Cow position:
               
chr13:20314555-20314715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
27, 68
               

               
Conread position:
               
394-541
               

               
Cow position:
               
chr13:18181714-18181857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
394-552
               

               
Cow position:
               
chr13:35557046-35557204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
36, 47
               

               
Conread position:
               
395-542
               

               
Cow position:
               
chr13:23480384-23480522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
403-551
               

               
Cow position:
               
chr13:17611500-17611647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
141, 35
               

               
Conread position:
               
410-542
               

               
Cow position:
               
chr13:55494477-55494609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
20, 35
               
Show alignments to all cow chromosomes.