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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8027P23.3
        

               
Conread position:
               
1-179
               

               
Cow position:
               
chr17:24824278-24824460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
102, 175
               

               
Conread position:
               
2-552
               

               
Cow position:
               
chr17:18109512-18108968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 120
               

               
Conread position:
               
4-190
               

               
Cow position:
               
chr17:1634453-1634273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
170-542
               

               
Cow position:
               
chr17:8079059-8079421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
58, 23
               

               
Conread position:
               
171-338
               

               
Cow position:
               
chr17:2275017-2275181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
57, 27
               

               
Conread position:
               
171-497
               

               
Cow position:
               
chr17:1783863-1783540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
142, 34
               

               
Conread position:
               
171-537
               

               
Cow position:
               
chr17:37163786-37163426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
57, 27
               

               
Conread position:
               
172-542
               

               
Cow position:
               
chr17:4213501-4213852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
11, 15
               

               
Conread position:
               
172-542
               

               
Cow position:
               
chr17:40771572-40771941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
56, 26
               

               
Conread position:
               
173-540
               

               
Cow position:
               
chr17:40289255-40288893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
111, 25
               

               
Conread position:
               
174-424
               

               
Cow position:
               
chr17:5041932-5041684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
25, 51
               

               
Conread position:
               
176-473
               

               
Cow position:
               
chr17:42347473-42347184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
144, 22
               

               
Conread position:
               
184-534
               

               
Cow position:
               
chr17:35126466-35126811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 20
               

               
Conread position:
               
203-444
               

               
Cow position:
               
chr17:26084807-26085050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
117, 5
               

               
Conread position:
               
204-413
               

               
Cow position:
               
chr17:20129451-20129653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
146, 5
               

               
Conread position:
               
205-428
               

               
Cow position:
               
chr17:3683884-3683658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
23, 33
               

               
Conread position:
               
205-473
               

               
Cow position:
               
chr17:18884575-18884290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
5, 41
               

               
Conread position:
               
207-410
               

               
Cow position:
               
chr17:7760688-7760482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
19, 160
               

               
Conread position:
               
207-442
               

               
Cow position:
               
chr17:25590461-25590219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
207-519
               

               
Cow position:
               
chr17:15333935-15333624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 230
               

               
Conread position:
               
207-542
               

               
Cow position:
               
chr17:1410466-1410129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 31
               

               
Conread position:
               
207-547
               

               
Cow position:
               
chr17:24821644-24821975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 46
               

               
Conread position:
               
208-325
               

               
Cow position:
               
chr17:2730022-2729904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
20, 113
               

               
Conread position:
               
208-339
               

               
Cow position:
               
chr17:11912924-11912788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
208-351
               

               
Cow position:
               
chr17:3153996-3153844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
208-364
               

               
Cow position:
               
chr17:1026055-1026217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
208-377
               

               
Cow position:
               
chr17:8644813-8644990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
18, 70
               

               
Conread position:
               
208-389
               

               
Cow position:
               
chr17:16117653-16117460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
208-397
               

               
Cow position:
               
chr17:3387070-3387258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
20, 70
               

               
Conread position:
               
208-429
               

               
Cow position:
               
chr17:20083736-20083517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
20, 128
               

               
Conread position:
               
208-432
               

               
Cow position:
               
chr17:1295795-1295564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
208-432
               

               
Cow position:
               
chr17:3843263-3843485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
20, 30
               

               
Conread position:
               
208-432
               

               
Cow position:
               
chr17:21874540-21874301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
20, 87
               

               
Conread position:
               
208-436
               

               
Cow position:
               
chr17:12216301-12216063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
208-436
               

               
Cow position:
               
chr17:17951019-17951251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
20, 151
               

               
Conread position:
               
208-437
               

               
Cow position:
               
chr17:23337238-23337006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
20, 145
               

               
Conread position:
               
208-442
               

               
Cow position:
               
chr17:33999268-33999033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
20, 157
               

               
Conread position:
               
208-447
               

               
Cow position:
               
chr17:27819078-27819326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
113, 38
               

               
Conread position:
               
208-448
               

               
Cow position:
               
chr17:11386292-11386538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
20, 37
               

               
Conread position:
               
208-449
               

               
Cow position:
               
chr17:25145534-25145299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
18, 108
               

               
Conread position:
               
208-455
               

               
Cow position:
               
chr17:30204431-30204684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
20, 244
               

               
Conread position:
               
208-473
               

               
Cow position:
               
chr17:27679468-27679197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
20, 215
               

               
Conread position:
               
208-491
               

               
Cow position:
               
chr17:27697916-27697639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
23, 40
               

               
Conread position:
               
208-538
               

               
Cow position:
               
chr17:7436942-7437272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
20, 73
               

               
Conread position:
               
208-538
               

               
Cow position:
               
chr17:11374913-11374592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
111, 64
               

               
Conread position:
               
208-538
               

               
Cow position:
               
chr17:19891391-19891729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
22, 209
               

               
Conread position:
               
208-538
               

               
Cow position:
               
chr17:23063487-23063824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
20, 227
               

               
Conread position:
               
208-538
               

               
Cow position:
               
chr17:25189056-25189390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
112, 239
               

               
Conread position:
               
208-540
               

               
Cow position:
               
chr17:15300094-15299773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
18, 108
               

               
Conread position:
               
208-540
               

               
Cow position:
               
chr17:20033140-20032805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
20, 235
               

               
Conread position:
               
208-540
               

               
Cow position:
               
chr17:34079322-34079004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
18, 114
               

               
Conread position:
               
208-540
               

               
Cow position:
               
chr17:38614732-38615067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 234
               

               
Conread position:
               
208-541
               

               
Cow position:
               
chr17:6423537-6423872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 39
               

               
Conread position:
               
208-541
               

               
Cow position:
               
chr17:21755665-21755327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
23, 242
               

               
Conread position:
               
208-542
               

               
Cow position:
               
chr17:923656-923988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
20, 38
               

               
Conread position:
               
208-542
               

               
Cow position:
               
chr17:7697832-7698156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
20, 45
               

               
Conread position:
               
208-542
               

               
Cow position:
               
chr17:21004055-21003720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 234
               

               
Conread position:
               
208-542
               

               
Cow position:
               
chr17:33933961-33933634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 25
               

               
Conread position:
               
208-542
               

               
Cow position:
               
chr17:36275133-36275442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
18, 93
               

               
Conread position:
               
208-546
               

               
Cow position:
               
chr17:23803244-23803574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
20, 61
               

               
Conread position:
               
208-552
               

               
Cow position:
               
chr17:9565085-9565420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
20, 193
               

               
Conread position:
               
209-473
               

               
Cow position:
               
chr17:4721264-4721534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
22, 93
               

               
Conread position:
               
210-442
               

               
Cow position:
               
chr17:20835370-20835608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 221
               

               
Conread position:
               
210-540
               

               
Cow position:
               
chr17:18490309-18490647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
8, 82
               

               
Conread position:
               
210-541
               

               
Cow position:
               
chr17:17405916-17406242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 177
               

               
Conread position:
               
210-542
               

               
Cow position:
               
chr17:12590945-12591283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 21
               

               
Conread position:
               
212-435
               

               
Cow position:
               
chr17:19455523-19455303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
16, 66
               

               
Conread position:
               
212-449
               

               
Cow position:
               
chr17:21207354-21207111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 159
               

               
Conread position:
               
212-542
               

               
Cow position:
               
chr17:20072294-20071990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
213-531
               

               
Cow position:
               
chr17:265436-265769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
39, 246
               

               
Conread position:
               
213-540
               

               
Cow position:
               
chr17:20800598-20800920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
100, 88
               

               
Conread position:
               
215-442
               

               
Cow position:
               
chr17:18494733-18494500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
7, 50
               

               
Conread position:
               
215-444
               

               
Cow position:
               
chr17:35311205-35311443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
29, 11
               

               
Conread position:
               
215-504
               

               
Cow position:
               
chr17:24773467-24773763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
16, 32
               

               
Conread position:
               
215-542
               

               
Cow position:
               
chr17:17060896-17060573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
95, 15
               

               
Conread position:
               
215-547
               

               
Cow position:
               
chr17:1275302-1275637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 235
               

               
Conread position:
               
216-448
               

               
Cow position:
               
chr17:25181365-25181123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
10, 232
               

               
Conread position:
               
216-465
               

               
Cow position:
               
chr17:27162436-27162684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
12, 172
               

               
Conread position:
               
217-425
               

               
Cow position:
               
chr17:21419216-21419435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
217-537
               

               
Cow position:
               
chr17:15664453-15664782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 218
               

               
Conread position:
               
217-542
               

               
Cow position:
               
chr17:21739100-21738765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 232
               

               
Conread position:
               
217-552
               

               
Cow position:
               
chr17:29363579-29363242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
5, 84
               

               
Conread position:
               
218-538
               

               
Cow position:
               
chr17:37138559-37138866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
142, 28
               

               
Conread position:
               
220-418
               

               
Cow position:
               
chr17:16895506-16895313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
8, 63
               

               
Conread position:
               
220-424
               

               
Cow position:
               
chr17:13409566-13409360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
11, 43
               

               
Conread position:
               
220-429
               

               
Cow position:
               
chr17:19998923-19999141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
8, 169
               

               
Conread position:
               
220-452
               

               
Cow position:
               
chr17:20815161-20815398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
8, 164
               

               
Conread position:
               
220-503
               

               
Cow position:
               
chr17:3471209-3471489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
11, 219
               

               
Conread position:
               
221-405
               

               
Cow position:
               
chr17:38116201-38116391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
7, 150
               

               
Conread position:
               
221-423
               

               
Cow position:
               
chr17:29040677-29040469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
7, 149
               

               
Conread position:
               
221-435
               

               
Cow position:
               
chr17:16307169-16307387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
221-439
               

               
Cow position:
               
chr17:2079550-2079773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
221-442
               

               
Cow position:
               
chr17:3466625-3466842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
81, 158
               

               
Conread position:
               
221-443
               

               
Cow position:
               
chr17:39012507-39012743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
7, 34
               

               
Conread position:
               
221-490
               

               
Cow position:
               
chr17:18245864-18246138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
5, 237
               

               
Conread position:
               
221-498
               

               
Cow position:
               
chr17:9778040-9778308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
5, 83
               

               
Conread position:
               
221-511
               

               
Cow position:
               
chr17:5733659-5733390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
7, 82
               

               
Conread position:
               
221-526
               

               
Cow position:
               
chr17:5688559-5688268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
7, 75
               

               
Conread position:
               
221-529
               

               
Cow position:
               
chr17:14848734-14848446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
7, 133
               

               
Conread position:
               
221-529
               

               
Cow position:
               
chr17:33271890-33271587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
23, 75
               

               
Conread position:
               
221-538
               

               
Cow position:
               
chr17:30665063-30665377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 25
               

               
Conread position:
               
221-540
               

               
Cow position:
               
chr17:12929754-12929424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
6, 224
               

               
Conread position:
               
221-540
               

               
Cow position:
               
chr17:14050403-14050100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
221-540
               

               
Cow position:
               
chr17:21599892-21599576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
102, 55
               

               
Conread position:
               
221-542
               

               
Cow position:
               
chr17:17410087-17410402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
5, 49
               

               
Conread position:
               
225-444
               

               
Cow position:
               
chr17:4473009-4472797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
208, 21
               

               
Conread position:
               
227-386
               

               
Cow position:
               
chr17:36533457-36533616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
227-494
               

               
Cow position:
               
chr17:13143894-13143627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 212
               

               
Conread position:
               
227-521
               

               
Cow position:
               
chr17:11296431-11296737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
227-542
               

               
Cow position:
               
chr17:21293249-21292935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
54, 194
               

               
Conread position:
               
227-542
               

               
Cow position:
               
chr17:21628278-21628587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 94
               

               
Conread position:
               
228-437
               

               
Cow position:
               
chr17:21697528-21697747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
228-549
               

               
Cow position:
               
chr17:12108601-12108920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
68, 25
               

               
Conread position:
               
230-466
               

               
Cow position:
               
chr17:25141256-25141485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
16, 133
               

               
Conread position:
               
231-539
               

               
Cow position:
               
chr17:9911563-9911863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 163
               

               
Conread position:
               
232-417
               

               
Cow position:
               
chr17:21807002-21806813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
30, 98
               

               
Conread position:
               
232-447
               

               
Cow position:
               
chr17:34864373-34864595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
87, 193
               

               
Conread position:
               
232-448
               

               
Cow position:
               
chr17:3139653-3139861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
84, 14
               

               
Conread position:
               
232-483
               

               
Cow position:
               
chr17:32950073-32950325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
87, 208
               

               
Conread position:
               
232-540
               

               
Cow position:
               
chr17:14033844-14033535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
19, 166
               

               
Conread position:
               
232-542
               

               
Cow position:
               
chr17:38832845-38833152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
86, 13
               

               
Conread position:
               
232-552
               

               
Cow position:
               
chr17:24824052-24824361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 92
               

               
Conread position:
               
233-463
               

               
Cow position:
               
chr17:20358681-20358904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
87, 13
               

               
Conread position:
               
233-540
               

               
Cow position:
               
chr17:5514561-5514867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
86, 42
               

               
Conread position:
               
233-540
               

               
Cow position:
               
chr17:20889176-20889478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
77, 128
               

               
Conread position:
               
233-542
               

               
Cow position:
               
chr17:9117445-9117753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 209
               

               
Conread position:
               
233-542
               

               
Cow position:
               
chr17:18495709-18495411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 45
               

               
Conread position:
               
233-542
               

               
Cow position:
               
chr17:30713155-30713454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
74, 39
               

               
Conread position:
               
234-362
               

               
Cow position:
               
chr17:13124933-13124796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
234-381
               

               
Cow position:
               
chr17:21039081-21039233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
88, 39
               

               
Conread position:
               
234-387
               

               
Cow position:
               
chr17:23680787-23680945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
234-389
               

               
Cow position:
               
chr17:40312524-40312689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
234-392
               

               
Cow position:
               
chr17:3258300-3258457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
87, 12
               

               
Conread position:
               
234-404
               

               
Cow position:
               
chr17:25078190-25078024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
151, 18
               

               
Conread position:
               
234-407
               

               
Cow position:
               
chr17:21412444-21412265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
91, 125
               

               
Conread position:
               
234-411
               

               
Cow position:
               
chr17:3498861-3498679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
56, 98
               

               
Conread position:
               
234-415
               

               
Cow position:
               
chr17:966936-966750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
234-420
               

               
Cow position:
               
chr17:30999579-30999760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
82, 23
               

               
Conread position:
               
234-422
               

               
Cow position:
               
chr17:36817745-36817937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
86, 74
               

               
Conread position:
               
234-424
               

               
Cow position:
               
chr17:7041142-7040949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
82, 95
               

               
Conread position:
               
234-430
               

               
Cow position:
               
chr17:10446719-10446922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
86, 127
               

               
Conread position:
               
234-431
               

               
Cow position:
               
chr17:44924372-44924182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
184, 66
               

               
Conread position:
               
234-432
               

               
Cow position:
               
chr17:21017597-21017802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 134
               

               
Conread position:
               
234-435
               

               
Cow position:
               
chr17:31232127-31231922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
234-435
               

               
Cow position:
               
chr17:34948443-34948647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
234-442
               

               
Cow position:
               
chr17:23880025-23879812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
52, 64
               

               
Conread position:
               
234-442
               

               
Cow position:
               
chr17:37415097-37414879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
234-442
               

               
Cow position:
               
chr17:37857931-37857708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
234-444
               

               
Cow position:
               
chr17:13236923-13236705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
51, 166
               

               
Conread position:
               
234-447
               

               
Cow position:
               
chr17:5745440-5745232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
86, 68
               

               
Conread position:
               
234-448
               

               
Cow position:
               
chr17:25755587-25755814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
234-466
               

               
Cow position:
               
chr17:11837225-11837456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
82, 171
               

               
Conread position:
               
234-494
               

               
Cow position:
               
chr17:27429381-27429640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
85, 141
               

               
Conread position:
               
234-494
               

               
Cow position:
               
chr17:32457777-32457497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
234-497
               

               
Cow position:
               
chr17:23246015-23246272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
87, 26
               

               
Conread position:
               
234-505
               

               
Cow position:
               
chr17:27765084-27765344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
234-514
               

               
Cow position:
               
chr17:6624061-6624337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
85, 173
               

               
Conread position:
               
234-516
               

               
Cow position:
               
chr17:2006504-2006777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
50, 87
               

               
Conread position:
               
234-518
               

               
Cow position:
               
chr17:26183025-26183313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
86, 205
               

               
Conread position:
               
234-524
               

               
Cow position:
               
chr17:36746515-36746234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
170, 48
               

               
Conread position:
               
234-527
               

               
Cow position:
               
chr17:2034348-2034623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
79, 62
               

               
Conread position:
               
234-531
               

               
Cow position:
               
chr17:24787218-24786922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 127
               

               
Conread position:
               
234-534
               

               
Cow position:
               
chr17:11397469-11397767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
88, 160
               

               
Conread position:
               
234-535
               

               
Cow position:
               
chr17:1020764-1020459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
79, 208
               

               
Conread position:
               
234-536
               

               
Cow position:
               
chr17:20215975-20216272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
68, 13
               

               
Conread position:
               
234-538
               

               
Cow position:
               
chr17:12289612-12289304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
79, 136
               

               
Conread position:
               
234-539
               

               
Cow position:
               
chr17:18720645-18720341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
120, 74
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr17:1256701-1256393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
88, 125
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr17:2810424-2810739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
117, 78
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr17:5224206-5224506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 57
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr17:10528938-10528621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr17:11361986-11362281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
86, 59
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr17:11381917-11381620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
38, 157
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr17:11618383-11618691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
85, 113
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr17:17121481-17121778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
80, 101
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr17:18201577-18201864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
118, 59
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr17:21335895-21335585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 211
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr17:21434926-21434624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
91, 125
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr17:23101408-23101112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 134
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr17:24490324-24490648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
87, 216
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr17:25796537-25796230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
85, 207
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr17:25815411-25815711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
10, 70
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr17:27795451-27795761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
87, 43
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr17:30529733-30529438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
121, 45
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr17:32279104-32278800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
85, 200
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr17:32419315-32419009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 181
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr17:39771199-39771506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
85, 127
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr17:40741450-40741759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
85, 209
               

               
Conread position:
               
234-541
               

               
Cow position:
               
chr17:24883761-24883463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
72, 26
               

               
Conread position:
               
234-541
               

               
Cow position:
               
chr17:33792985-33793271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
133, 84
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr17:2662212-2662533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
79, 221
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr17:4225688-4225391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 162
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr17:5767717-5768013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
80, 175
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr17:7132652-7132330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr17:7810936-7810646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
68, 150
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr17:9853789-9854085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
88, 149
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr17:11101991-11101698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr17:11216080-11215785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 69
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr17:12220135-12219830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
73, 127
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr17:12325943-12325656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
67, 148
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr17:15684308-15684619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
62, 209
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr17:20090818-20090528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
87, 128
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr17:20993236-20992933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 70
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr17:24077207-24077510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
86, 17
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr17:24553807-24554105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 157
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr17:24587421-24587733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 202
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr17:27047966-27048264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
89, 41
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr17:29715383-29715096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 140
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr17:32138597-32138315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr17:36331163-36330849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 45
               

               
Conread position:
               
234-549
               

               
Cow position:
               
chr17:4612274-4611947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
86, 165
               

               
Conread position:
               
234-549
               

               
Cow position:
               
chr17:11172812-11172499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 142
               

               
Conread position:
               
234-552
               

               
Cow position:
               
chr17:15103085-15102775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 152
               

               
Conread position:
               
234-552
               

               
Cow position:
               
chr17:25128546-25128234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 37
               

               
Conread position:
               
234-552
               

               
Cow position:
               
chr17:31231311-31231004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
78, 57
               

               
Conread position:
               
234-552
               

               
Cow position:
               
chr17:32027659-32027333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
80, 214
               

               
Conread position:
               
234-552
               

               
Cow position:
               
chr17:33288851-33288538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 135
               

               
Conread position:
               
235-416
               

               
Cow position:
               
chr17:35372013-35371835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
9, 80
               

               
Conread position:
               
235-450
               

               
Cow position:
               
chr17:44232916-44232691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
235-540
               

               
Cow position:
               
chr17:11035725-11036019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
50, 157
               

               
Conread position:
               
235-540
               

               
Cow position:
               
chr17:17179840-17180150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
80, 53
               

               
Conread position:
               
235-541
               

               
Cow position:
               
chr17:24004198-24004480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
236-349
               

               
Cow position:
               
chr17:10432391-10432277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
236-349
               

               
Cow position:
               
chr17:23517363-23517246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
236-406
               

               
Cow position:
               
chr17:1358993-1358822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
85, 25
               

               
Conread position:
               
236-410
               

               
Cow position:
               
chr17:1328166-1327987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
77, 146
               

               
Conread position:
               
236-410
               

               
Cow position:
               
chr17:3182780-3182601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
236-410
               

               
Cow position:
               
chr17:3518447-3518269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
84, 96
               

               
Conread position:
               
236-412
               

               
Cow position:
               
chr17:3578049-3578220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
85, 132
               

               
Conread position:
               
236-419
               

               
Cow position:
               
chr17:16448137-16448331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
85, 19
               

               
Conread position:
               
236-420
               

               
Cow position:
               
chr17:10220285-10220469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
83, 123
               

               
Conread position:
               
236-421
               

               
Cow position:
               
chr17:34316904-34316714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
77, 125
               

               
Conread position:
               
236-432
               

               
Cow position:
               
chr17:3306672-3306872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
236-432
               

               
Cow position:
               
chr17:19756096-19755895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
46, 122
               

               
Conread position:
               
236-440
               

               
Cow position:
               
chr17:15363757-15363546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
236-443
               

               
Cow position:
               
chr17:5896106-5895895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
78, 149
               

               
Conread position:
               
236-443
               

               
Cow position:
               
chr17:11171600-11171809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
83, 143
               

               
Conread position:
               
236-443
               

               
Cow position:
               
chr17:21363212-21363422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
84, 169
               

               
Conread position:
               
236-474
               

               
Cow position:
               
chr17:20912702-20912929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
115, 82
               

               
Conread position:
               
236-475
               

               
Cow position:
               
chr17:26224322-26224553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
83, 143
               

               
Conread position:
               
236-483
               

               
Cow position:
               
chr17:21313000-21312759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
236-487
               

               
Cow position:
               
chr17:5246700-5246948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
84, 155
               

               
Conread position:
               
236-491
               

               
Cow position:
               
chr17:12059286-12059034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 199
               

               
Conread position:
               
236-494
               

               
Cow position:
               
chr17:27305963-27306221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
83, 206
               

               
Conread position:
               
236-503
               

               
Cow position:
               
chr17:5695143-5694881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
85, 100
               

               
Conread position:
               
236-505
               

               
Cow position:
               
chr17:33291006-33290738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 70
               

               
Conread position:
               
236-527
               

               
Cow position:
               
chr17:21243982-21243696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 147
               

               
Conread position:
               
236-528
               

               
Cow position:
               
chr17:41290213-41289929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
61, 161
               

               
Conread position:
               
236-537
               

               
Cow position:
               
chr17:24580495-24580190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
85, 209
               

               
Conread position:
               
236-538
               

               
Cow position:
               
chr17:21680573-21680884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
83, 134
               

               
Conread position:
               
236-538
               

               
Cow position:
               
chr17:34595744-34596045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
80, 143
               

               
Conread position:
               
236-540
               

               
Cow position:
               
chr17:21959875-21959581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 32
               

               
Conread position:
               
236-540
               

               
Cow position:
               
chr17:26515931-26515626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
88, 131
               

               
Conread position:
               
236-540
               

               
Cow position:
               
chr17:29080370-29080650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
236-540
               

               
Cow position:
               
chr17:38200960-38200656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
87, 207
               

               
Conread position:
               
236-542
               

               
Cow position:
               
chr17:5423267-5422960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 37
               

               
Conread position:
               
236-542
               

               
Cow position:
               
chr17:6936858-6936572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
71, 120
               

               
Conread position:
               
236-542
               

               
Cow position:
               
chr17:20848335-20848631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
236-542
               

               
Cow position:
               
chr17:26818648-26818349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 167
               

               
Conread position:
               
236-542
               

               
Cow position:
               
chr17:39735990-39736283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
236-543
               

               
Cow position:
               
chr17:16371056-16371366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 207
               

               
Conread position:
               
236-552
               

               
Cow position:
               
chr17:25097267-25097574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
60, 197
               

               
Conread position:
               
236-552
               

               
Cow position:
               
chr17:25901003-25901319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 18
               

               
Conread position:
               
236-552
               

               
Cow position:
               
chr17:40421473-40421790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 131
               

               
Conread position:
               
237-351
               

               
Cow position:
               
chr17:20055479-20055593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
79, 85
               

               
Conread position:
               
237-387
               

               
Cow position:
               
chr17:12054526-12054682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
73, 10
               

               
Conread position:
               
237-391
               

               
Cow position:
               
chr17:43527783-43527942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
237-430
               

               
Cow position:
               
chr17:10649655-10649845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
112, 164
               

               
Conread position:
               
237-432
               

               
Cow position:
               
chr17:33052669-33052864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
114, 185
               

               
Conread position:
               
237-437
               

               
Cow position:
               
chr17:39412693-39412488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
84, 14
               

               
Conread position:
               
237-443
               

               
Cow position:
               
chr17:41029759-41029971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
237-444
               

               
Cow position:
               
chr17:11304843-11305047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
83, 72
               

               
Conread position:
               
237-446
               

               
Cow position:
               
chr17:29292561-29292347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
100, 86
               

               
Conread position:
               
237-470
               

               
Cow position:
               
chr17:26881531-26881294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
73, 208
               

               
Conread position:
               
237-487
               

               
Cow position:
               
chr17:242442-242692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
83, 191
               

               
Conread position:
               
237-491
               

               
Cow position:
               
chr17:9748576-9748805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
237-497
               

               
Cow position:
               
chr17:22563989-22564252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
83, 63
               

               
Conread position:
               
237-502
               

               
Cow position:
               
chr17:8690634-8690372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
50, 42
               

               
Conread position:
               
237-527
               

               
Cow position:
               
chr17:7648026-7648306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
113, 82
               

               
Conread position:
               
237-535
               

               
Cow position:
               
chr17:32366091-32366389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
76, 13
               

               
Conread position:
               
237-538
               

               
Cow position:
               
chr17:26764819-26765128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 186
               

               
Conread position:
               
237-540
               

               
Cow position:
               
chr17:1493349-1493042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
84, 34
               

               
Conread position:
               
237-540
               

               
Cow position:
               
chr17:3781851-3782150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 163
               

               
Conread position:
               
237-540
               

               
Cow position:
               
chr17:11278226-11277921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
87, 42
               

               
Conread position:
               
237-540
               

               
Cow position:
               
chr17:18592246-18592549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 159
               

               
Conread position:
               
237-540
               

               
Cow position:
               
chr17:25999922-26000224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
88, 138
               

               
Conread position:
               
237-540
               

               
Cow position:
               
chr17:37482273-37481962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
82, 207
               

               
Conread position:
               
237-540
               

               
Cow position:
               
chr17:43141910-43141602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 160
               

               
Conread position:
               
237-542
               

               
Cow position:
               
chr17:3503393-3503690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
237-542
               

               
Cow position:
               
chr17:6566277-6566590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 154
               

               
Conread position:
               
237-542
               

               
Cow position:
               
chr17:12447592-12447283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 24
               

               
Conread position:
               
237-542
               

               
Cow position:
               
chr17:13244220-13243941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
237-542
               

               
Cow position:
               
chr17:30539441-30539157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
237-542
               

               
Cow position:
               
chr17:30718613-30718309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
82, 182
               

               
Conread position:
               
237-542
               

               
Cow position:
               
chr17:31481239-31480929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
75, 189
               

               
Conread position:
               
237-542
               

               
Cow position:
               
chr17:33275940-33275641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
82, 138
               

               
Conread position:
               
237-542
               

               
Cow position:
               
chr17:41892262-41891952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
82, 124
               

               
Conread position:
               
237-543
               

               
Cow position:
               
chr17:11839504-11839832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
59, 71
               

               
Conread position:
               
237-543
               

               
Cow position:
               
chr17:13922281-13922593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 204
               

               
Conread position:
               
237-549
               

               
Cow position:
               
chr17:28539843-28540144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 46
               

               
Conread position:
               
237-550
               

               
Cow position:
               
chr17:24973757-24974058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 202
               

               
Conread position:
               
237-552
               

               
Cow position:
               
chr17:11156687-11156375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
82, 173
               

               
Conread position:
               
238-349
               

               
Cow position:
               
chr17:15376130-15376244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
238-430
               

               
Cow position:
               
chr17:4606777-4606960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
238-435
               

               
Cow position:
               
chr17:43633928-43634115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
19, 61
               

               
Conread position:
               
238-447
               

               
Cow position:
               
chr17:11056567-11056351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
61, 207
               

               
Conread position:
               
238-448
               

               
Cow position:
               
chr17:3042286-3042496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
138, 84
               

               
Conread position:
               
238-457
               

               
Cow position:
               
chr17:15132971-15133178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
238-511
               

               
Cow position:
               
chr17:20839753-20839488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
82, 23
               

               
Conread position:
               
238-528
               

               
Cow position:
               
chr17:4601741-4601450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 172
               

               
Conread position:
               
238-538
               

               
Cow position:
               
chr17:5000769-5000483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
76, 183
               

               
Conread position:
               
238-538
               

               
Cow position:
               
chr17:8279902-8279602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
82, 201
               

               
Conread position:
               
238-538
               

               
Cow position:
               
chr17:13940515-13940217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
87, 187
               

               
Conread position:
               
238-540
               

               
Cow position:
               
chr17:1061255-1060941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 46
               

               
Conread position:
               
238-540
               

               
Cow position:
               
chr17:5730730-5731023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
49, 65
               

               
Conread position:
               
238-540
               

               
Cow position:
               
chr17:28285220-28284921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 9
               

               
Conread position:
               
238-540
               

               
Cow position:
               
chr17:37480186-37479895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
84, 175
               

               
Conread position:
               
238-540
               

               
Cow position:
               
chr17:42419538-42419816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
122, 64
               

               
Conread position:
               
238-542
               

               
Cow position:
               
chr17:20157422-20157716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
238-542
               

               
Cow position:
               
chr17:21115141-21114845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 58
               

               
Conread position:
               
238-542
               

               
Cow position:
               
chr17:21495182-21495480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
75, 23
               

               
Conread position:
               
238-552
               

               
Cow position:
               
chr17:20022710-20022395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 105
               

               
Conread position:
               
239-396
               

               
Cow position:
               
chr17:14088519-14088353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
239-409
               

               
Cow position:
               
chr17:43717505-43717332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
239-433
               

               
Cow position:
               
chr17:32651424-32651626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
239-442
               

               
Cow position:
               
chr17:38276497-38276702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
8, 116
               

               
Conread position:
               
239-444
               

               
Cow position:
               
chr17:20234035-20234244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
79, 51
               

               
Conread position:
               
239-446
               

               
Cow position:
               
chr17:15985161-15985368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
75, 34
               

               
Conread position:
               
239-470
               

               
Cow position:
               
chr17:4436423-4436194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
73, 104
               

               
Conread position:
               
239-478
               

               
Cow position:
               
chr17:15067818-15067580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
80, 118
               

               
Conread position:
               
239-494
               

               
Cow position:
               
chr17:24549977-24550238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
43, 207
               

               
Conread position:
               
239-497
               

               
Cow position:
               
chr17:24761418-24761164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
82, 189
               

               
Conread position:
               
239-511
               

               
Cow position:
               
chr17:40892957-40893229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
99, 209
               

               
Conread position:
               
239-529
               

               
Cow position:
               
chr17:20870288-20870002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
69, 29
               

               
Conread position:
               
239-538
               

               
Cow position:
               
chr17:9746326-9746617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 196
               

               
Conread position:
               
239-538
               

               
Cow position:
               
chr17:22806733-22806437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
71, 147
               

               
Conread position:
               
239-539
               

               
Cow position:
               
chr17:20780318-20780621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
82, 200
               

               
Conread position:
               
239-540
               

               
Cow position:
               
chr17:26230747-26231061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
80, 211
               

               
Conread position:
               
239-541
               

               
Cow position:
               
chr17:18860911-18860613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 80
               

               
Conread position:
               
239-542
               

               
Cow position:
               
chr17:11664783-11664474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 151
               

               
Conread position:
               
239-542
               

               
Cow position:
               
chr17:21973325-21973021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
75, 196
               

               
Conread position:
               
239-544
               

               
Cow position:
               
chr17:32471986-32471670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 212
               

               
Conread position:
               
239-552
               

               
Cow position:
               
chr17:18472984-18473282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
75, 157
               

               
Conread position:
               
240-410
               

               
Cow position:
               
chr17:32554217-32554041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
81, 121
               

               
Conread position:
               
240-417
               

               
Cow position:
               
chr17:25168119-25168309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
240-426
               

               
Cow position:
               
chr17:27667385-27667188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
240-447
               

               
Cow position:
               
chr17:144367-144155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
6, 79
               

               
Conread position:
               
240-480
               

               
Cow position:
               
chr17:21031594-21031834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
68, 199
               

               
Conread position:
               
240-506
               

               
Cow position:
               
chr17:43826430-43826183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
230, 77
               

               
Conread position:
               
240-541
               

               
Cow position:
               
chr17:5006682-5006382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
39, 173
               

               
Conread position:
               
240-542
               

               
Cow position:
               
chr17:25032663-25032373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
119, 73
               

               
Conread position:
               
240-542
               

               
Cow position:
               
chr17:38646873-38647170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
240-542
               

               
Cow position:
               
chr17:40331574-40331873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 181
               

               
Conread position:
               
240-552
               

               
Cow position:
               
chr17:29084012-29084293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
241-491
               

               
Cow position:
               
chr17:1526547-1526293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
81, 20
               

               
Conread position:
               
242-449
               

               
Cow position:
               
chr17:33926314-33926103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
79, 66
               

               
Conread position:
               
242-464
               

               
Cow position:
               
chr17:28847857-28847630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
77, 119
               

               
Conread position:
               
243-552
               

               
Cow position:
               
chr17:20932139-20932450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 199
               

               
Conread position:
               
245-399
               

               
Cow position:
               
chr17:21710319-21710478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
57, 105
               

               
Conread position:
               
245-437
               

               
Cow position:
               
chr17:4824308-4824506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
67, 48
               

               
Conread position:
               
245-444
               

               
Cow position:
               
chr17:41400156-41399955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
75, 131
               

               
Conread position:
               
245-535
               

               
Cow position:
               
chr17:1063003-1063276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
66, 94
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr17:17222156-17222447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
62, 181
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr17:32989306-32989583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
245-540
               

               
Cow position:
               
chr17:32993800-32993517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 59
               

               
Conread position:
               
245-542
               

               
Cow position:
               
chr17:908560-908849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 99
               

               
Conread position:
               
246-368
               

               
Cow position:
               
chr17:20269417-20269543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
246-540
               

               
Cow position:
               
chr17:8544121-8544413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
74, 187
               

               
Conread position:
               
246-552
               

               
Cow position:
               
chr17:11281291-11280981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
74, 24
               

               
Conread position:
               
246-552
               

               
Cow position:
               
chr17:25611908-25612209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 0
               

               
Conread position:
               
247-444
               

               
Cow position:
               
chr17:22781503-22781707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
72, 196
               

               
Conread position:
               
247-539
               

               
Cow position:
               
chr17:12536652-12536359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 196
               

               
Conread position:
               
247-539
               

               
Cow position:
               
chr17:25541996-25541711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 6
               

               
Conread position:
               
247-542
               

               
Cow position:
               
chr17:8837133-8836839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
73, 193
               

               
Conread position:
               
247-544
               

               
Cow position:
               
chr17:17059255-17059534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
247-552
               

               
Cow position:
               
chr17:36790955-36791245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
60, 71
               

               
Conread position:
               
248-410
               

               
Cow position:
               
chr17:27142573-27142743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
248-444
               

               
Cow position:
               
chr17:20126431-20126630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
66, 13
               

               
Conread position:
               
248-538
               

               
Cow position:
               
chr17:1035784-1035492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
71, 194
               

               
Conread position:
               
249-542
               

               
Cow position:
               
chr17:3577356-3577648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 162
               

               
Conread position:
               
249-552
               

               
Cow position:
               
chr17:36203672-36203365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
84, 67
               

               
Conread position:
               
251-497
               

               
Cow position:
               
chr17:34208000-34207751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 200
               

               
Conread position:
               
251-542
               

               
Cow position:
               
chr17:9697881-9697573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 18
               

               
Conread position:
               
251-542
               

               
Cow position:
               
chr17:29157238-29157525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 130
               

               
Conread position:
               
252-405
               

               
Cow position:
               
chr17:3442847-3442690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
252-542
               

               
Cow position:
               
chr17:5900199-5900478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
166, 53
               

               
Conread position:
               
253-448
               

               
Cow position:
               
chr17:8861363-8861161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
68, 151
               

               
Conread position:
               
253-491
               

               
Cow position:
               
chr17:18824612-18824849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
61, 180
               

               
Conread position:
               
254-507
               

               
Cow position:
               
chr17:38363148-38362909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
225, 14
               

               
Conread position:
               
254-540
               

               
Cow position:
               
chr17:24149000-24149291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
68, 183
               

               
Conread position:
               
254-542
               

               
Cow position:
               
chr17:32273861-32273578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 50
               

               
Conread position:
               
256-437
               

               
Cow position:
               
chr17:36268221-36268398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
64, 138
               

               
Conread position:
               
256-542
               

               
Cow position:
               
chr17:10459111-10458823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 181
               

               
Conread position:
               
257-540
               

               
Cow position:
               
chr17:3467595-3467859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
57, 141
               

               
Conread position:
               
258-540
               

               
Cow position:
               
chr17:20990367-20990083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 155
               

               
Conread position:
               
259-487
               

               
Cow position:
               
chr17:30734451-30734240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
90, 44
               

               
Conread position:
               
259-549
               

               
Cow position:
               
chr17:1634654-1634376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
260-542
               

               
Cow position:
               
chr17:979324-979058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
54, 170
               

               
Conread position:
               
260-542
               

               
Cow position:
               
chr17:15340908-15340643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
236, 43
               

               
Conread position:
               
262-542
               

               
Cow position:
               
chr17:22032863-22032586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
59, 174
               

               
Conread position:
               
265-432
               

               
Cow position:
               
chr17:17683064-17682896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
86, 58
               

               
Conread position:
               
265-437
               

               
Cow position:
               
chr17:13672235-13672060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
55, 15
               

               
Conread position:
               
265-492
               

               
Cow position:
               
chr17:44561250-44561015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
36, 108
               

               
Conread position:
               
265-503
               

               
Cow position:
               
chr17:10510828-10510587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
56, 177
               

               
Conread position:
               
265-540
               

               
Cow position:
               
chr17:21918040-21917766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
49, 166
               

               
Conread position:
               
267-456
               

               
Cow position:
               
chr17:37775957-37776148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
47, 114
               

               
Conread position:
               
267-537
               

               
Cow position:
               
chr17:37778781-37778515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
47, 114
               

               
Conread position:
               
267-540
               

               
Cow position:
               
chr17:4106150-4105887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
49, 115
               

               
Conread position:
               
267-540
               

               
Cow position:
               
chr17:4121886-4121623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
49, 115
               

               
Conread position:
               
269-503
               

               
Cow position:
               
chr17:21298062-21298302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
44, 177
               

               
Conread position:
               
269-542
               

               
Cow position:
               
chr17:1562936-1562678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
52, 150
               

               
Conread position:
               
269-542
               

               
Cow position:
               
chr17:7142702-7142970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
45, 147
               

               
Conread position:
               
269-542
               

               
Cow position:
               
chr17:27058715-27058448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
52, 78
               

               
Conread position:
               
270-492
               

               
Cow position:
               
chr17:1353235-1353456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
50, 158
               

               
Conread position:
               
270-522
               

               
Cow position:
               
chr17:25916731-25916984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
38, 172
               

               
Conread position:
               
270-535
               

               
Cow position:
               
chr17:15188242-15187967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
52, 183
               

               
Conread position:
               
270-539
               

               
Cow position:
               
chr17:12946526-12946246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
53, 145
               

               
Conread position:
               
270-540
               

               
Cow position:
               
chr17:10473667-10473954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
44, 183
               

               
Conread position:
               
272-438
               

               
Cow position:
               
chr17:38613087-38613258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
272-526
               

               
Cow position:
               
chr17:27549987-27549735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
39, 107
               

               
Conread position:
               
272-542
               

               
Cow position:
               
chr17:28467977-28468231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
48, 112
               

               
Conread position:
               
273-466
               

               
Cow position:
               
chr17:40792065-40792259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
47, 145
               

               
Conread position:
               
273-526
               

               
Cow position:
               
chr17:10020957-10020698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
49, 174
               

               
Conread position:
               
273-542
               

               
Cow position:
               
chr17:31037538-31037268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 165
               

               
Conread position:
               
273-552
               

               
Cow position:
               
chr17:14762277-14762003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
47, 97
               

               
Conread position:
               
275-542
               

               
Cow position:
               
chr17:4967954-4968221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
44, 121
               

               
Conread position:
               
276-488
               

               
Cow position:
               
chr17:267739-267530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
75, 140
               

               
Conread position:
               
279-453
               

               
Cow position:
               
chr17:31701285-31701473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
44, 157
               

               
Conread position:
               
279-470
               

               
Cow position:
               
chr17:484451-484635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
280-474
               

               
Cow position:
               
chr17:5382137-5381953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
77, 43
               

               
Conread position:
               
280-533
               

               
Cow position:
               
chr17:18146031-18146285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
41, 153
               

               
Conread position:
               
281-540
               

               
Cow position:
               
chr17:24559149-24559397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
76, 36
               

               
Conread position:
               
283-540
               

               
Cow position:
               
chr17:14003669-14003932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
38, 156
               

               
Conread position:
               
284-538
               

               
Cow position:
               
chr17:6328961-6329220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
35, 163
               

               
Conread position:
               
285-542
               

               
Cow position:
               
chr17:20874249-20874505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
72, 24
               

               
Conread position:
               
286-542
               

               
Cow position:
               
chr17:1040604-1040854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 154
               

               
Conread position:
               
290-540
               

               
Cow position:
               
chr17:24928338-24928582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
61, 26
               

               
Conread position:
               
294-542
               

               
Cow position:
               
chr17:39857260-39857499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
61, 118
               

               
Conread position:
               
305-540
               

               
Cow position:
               
chr17:9966150-9965920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
52, 129
               

               
Conread position:
               
305-549
               

               
Cow position:
               
chr17:6318979-6318751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
306-487
               

               
Cow position:
               
chr17:11921403-11921220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
306-540
               

               
Cow position:
               
chr17:14060897-14060667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
57, 132
               

               
Conread position:
               
306-540
               

               
Cow position:
               
chr17:32280544-32280772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
18, 124
               

               
Conread position:
               
306-542
               

               
Cow position:
               
chr17:20884402-20884632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
310-539
               

               
Cow position:
               
chr17:4300037-4299824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
195, 60
               

               
Conread position:
               
310-542
               

               
Cow position:
               
chr17:33658187-33657959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
311-450
               

               
Cow position:
               
chr17:14883200-14883061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
50, 124
               

               
Conread position:
               
312-447
               

               
Cow position:
               
chr17:25122523-25122389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
37, 102
               

               
Conread position:
               
312-540
               

               
Cow position:
               
chr17:25501995-25502217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
114, 128
               

               
Conread position:
               
312-541
               

               
Cow position:
               
chr17:32348959-32349175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
312-541
               

               
Cow position:
               
chr17:45726041-45726256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
312-542
               

               
Cow position:
               
chr17:31856548-31856782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
45, 138
               

               
Conread position:
               
312-552
               

               
Cow position:
               
chr17:23563904-23563676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
206, 25
               

               
Conread position:
               
314-552
               

               
Cow position:
               
chr17:11215342-11215113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
42, 59
               

               
Conread position:
               
320-541
               

               
Cow position:
               
chr17:21758253-21758033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
21, 116
               

               
Conread position:
               
321-539
               

               
Cow position:
               
chr17:7136876-7137085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
30, 91
               

               
Conread position:
               
321-540
               

               
Cow position:
               
chr17:35339021-35338814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
321-541
               

               
Cow position:
               
chr17:11832225-11832007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
36, 92
               

               
Conread position:
               
321-542
               

               
Cow position:
               
chr17:40851877-40852079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
322-513
               

               
Cow position:
               
chr17:33411127-33410936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
34, 108
               

               
Conread position:
               
322-538
               

               
Cow position:
               
chr17:26233931-26233725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
322-542
               

               
Cow position:
               
chr17:30728417-30728613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
323-541
               

               
Cow position:
               
chr17:34751509-34751298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
324-511
               

               
Cow position:
               
chr17:32009540-32009362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
324-542
               

               
Cow position:
               
chr17:10561527-10561743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
36, 29
               

               
Conread position:
               
325-484
               

               
Cow position:
               
chr17:32017979-32017825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
325-540
               

               
Cow position:
               
chr17:23798179-23798388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
325-541
               

               
Cow position:
               
chr17:7654557-7654344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
325-549
               

               
Cow position:
               
chr17:25616157-25616365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
325-552
               

               
Cow position:
               
chr17:21325231-21325451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
326-540
               

               
Cow position:
               
chr17:14652881-14652673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
327-537
               

               
Cow position:
               
chr17:40250326-40250528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
327-552
               

               
Cow position:
               
chr17:35573663-35573871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
328-552
               

               
Cow position:
               
chr17:11912596-11912384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
329-516
               

               
Cow position:
               
chr17:11344119-11344301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
329-552
               

               
Cow position:
               
chr17:25514221-25514004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
332-542
               

               
Cow position:
               
chr17:23517037-23516833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
332-542
               

               
Cow position:
               
chr17:27203139-27202937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
25, 103
               

               
Conread position:
               
335-542
               

               
Cow position:
               
chr17:21489716-21489516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
22, 100
               

               
Conread position:
               
336-540
               

               
Cow position:
               
chr17:12880508-12880703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
342-540
               

               
Cow position:
               
chr17:25342825-25342634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
11, 99
               

               
Conread position:
               
345-542
               

               
Cow position:
               
chr17:38263568-38263381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
346-542
               

               
Cow position:
               
chr17:10432057-10431865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
177, 84
               

               
Conread position:
               
348-542
               

               
Cow position:
               
chr17:9824590-9824778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
100, 79
               

               
Conread position:
               
349-540
               

               
Cow position:
               
chr17:1469299-1469482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
349-542
               

               
Cow position:
               
chr17:40406366-40406553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
350-540
               

               
Cow position:
               
chr17:8598182-8598003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
352-529
               

               
Cow position:
               
chr17:12511050-12510878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
18, 67
               

               
Conread position:
               
353-542
               

               
Cow position:
               
chr17:36864557-36864739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
354-541
               

               
Cow position:
               
chr17:21478995-21478814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
355-552
               

               
Cow position:
               
chr17:11368922-11368731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
356-537
               

               
Cow position:
               
chr17:3153642-3153470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
358-542
               

               
Cow position:
               
chr17:40638881-40639056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
361-552
               

               
Cow position:
               
chr17:24750851-24751033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
157, 67
               

               
Conread position:
               
362-542
               

               
Cow position:
               
chr17:1025885-1025716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
165, 70
               

               
Conread position:
               
362-542
               

               
Cow position:
               
chr17:34791131-34790955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
141, 75
               

               
Conread position:
               
371-511
               

               
Cow position:
               
chr17:20269675-20269814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
117, 63
               

               
Conread position:
               
371-541
               

               
Cow position:
               
chr17:5372585-5372419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
375-542
               

               
Cow position:
               
chr17:22051644-22051481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
375-542
               

               
Cow position:
               
chr17:32333144-32332982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
375-542
               

               
Cow position:
               
chr17:39606378-39606539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
378-542
               

               
Cow position:
               
chr17:25126303-25126459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
379-534
               

               
Cow position:
               
chr17:22017135-22016983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
379-542
               

               
Cow position:
               
chr17:18934209-18934368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
78, 52
               

               
Conread position:
               
379-542
               

               
Cow position:
               
chr17:21039516-21039666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
385-542
               

               
Cow position:
               
chr17:25800924-25800772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
117, 49
               

               
Conread position:
               
389-542
               

               
Cow position:
               
chr17:17044371-17044223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
399-540
               

               
Cow position:
               
chr17:25511214-25511351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
400-542
               

               
Cow position:
               
chr17:29995465-29995327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
402-544
               

               
Cow position:
               
chr17:25473304-25473169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
403-542
               

               
Cow position:
               
chr17:12959081-12959215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
405-545
               

               
Cow position:
               
chr17:18848183-18848046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
409-542
               

               
Cow position:
               
chr17:11478747-11478878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
46, 24
               

               
Conread position:
               
410-542
               

               
Cow position:
               
chr17:9932319-9932191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
411-540
               

               
Cow position:
               
chr17:30212869-30212992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
415-543
               

               
Cow position:
               
chr17:37341053-37340927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
435-552
               

               
Cow position:
               
chr17:42150392-42150510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
7, 0
               
Show alignments to all cow chromosomes.