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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8027P23.3
        

               
Conread position:
               
4-186
               

               
Cow position:
               
chr28:3445478-3445298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
123, 53
               

               
Conread position:
               
31-539
               

               
Cow position:
               
chr28:11006756-11007271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
46, 69
               

               
Conread position:
               
154-442
               

               
Cow position:
               
chr28:29455969-29455676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
29, 33
               

               
Conread position:
               
161-540
               

               
Cow position:
               
chr28:5817545-5817913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
159, 37
               

               
Conread position:
               
167-483
               

               
Cow position:
               
chr28:9390662-9390349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
5, 26
               

               
Conread position:
               
167-542
               

               
Cow position:
               
chr28:18354612-18354260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
184, 25
               

               
Conread position:
               
171-487
               

               
Cow position:
               
chr28:4880556-4880246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
57, 27
               

               
Conread position:
               
171-540
               

               
Cow position:
               
chr28:5684412-5684774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 26
               

               
Conread position:
               
171-540
               

               
Cow position:
               
chr28:10682114-10681754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
38, 27
               

               
Conread position:
               
171-540
               

               
Cow position:
               
chr28:11752437-11752068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 28
               

               
Conread position:
               
171-542
               

               
Cow position:
               
chr28:4188237-4188627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 37
               

               
Conread position:
               
171-542
               

               
Cow position:
               
chr28:4536178-4536532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 27
               

               
Conread position:
               
171-542
               

               
Cow position:
               
chr28:15044148-15043789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 73
               

               
Conread position:
               
171-552
               

               
Cow position:
               
chr28:12430317-12430688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 27
               

               
Conread position:
               
172-430
               

               
Cow position:
               
chr28:2279957-2279698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
54, 26
               

               
Conread position:
               
172-487
               

               
Cow position:
               
chr28:3751028-3751332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 26
               

               
Conread position:
               
172-542
               

               
Cow position:
               
chr28:22500777-22500427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
33, 37
               

               
Conread position:
               
173-552
               

               
Cow position:
               
chr28:11585498-11585119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 25
               

               
Conread position:
               
174-362
               

               
Cow position:
               
chr28:7372540-7372351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
54, 25
               

               
Conread position:
               
174-474
               

               
Cow position:
               
chr28:26784758-26784458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
11, 26
               

               
Conread position:
               
174-539
               

               
Cow position:
               
chr28:23530575-23530944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
54, 23
               

               
Conread position:
               
179-538
               

               
Cow position:
               
chr28:9636745-9636388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 261
               

               
Conread position:
               
186-542
               

               
Cow position:
               
chr28:25399609-25399942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
23, 12
               

               
Conread position:
               
194-542
               

               
Cow position:
               
chr28:25282925-25283267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
35, 101
               

               
Conread position:
               
201-542
               

               
Cow position:
               
chr28:5074768-5074435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
203-537
               

               
Cow position:
               
chr28:25070851-25071188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
6, 97
               

               
Conread position:
               
204-538
               

               
Cow position:
               
chr28:18934191-18934523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
37, 161
               

               
Conread position:
               
204-552
               

               
Cow position:
               
chr28:6059734-6059387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
107, 8
               

               
Conread position:
               
206-531
               

               
Cow position:
               
chr28:21502134-21502454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 181
               

               
Conread position:
               
207-470
               

               
Cow position:
               
chr28:27428490-27428748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
11, 100
               

               
Conread position:
               
208-364
               

               
Cow position:
               
chr28:16879527-16879372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
18, 68
               

               
Conread position:
               
208-399
               

               
Cow position:
               
chr28:22304595-22304785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
20, 69
               

               
Conread position:
               
208-425
               

               
Cow position:
               
chr28:16244018-16243796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
23, 91
               

               
Conread position:
               
208-432
               

               
Cow position:
               
chr28:24996848-24996619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
14, 59
               

               
Conread position:
               
208-435
               

               
Cow position:
               
chr28:22351234-22351465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
18, 137
               

               
Conread position:
               
208-443
               

               
Cow position:
               
chr28:10888402-10888643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
11, 186
               

               
Conread position:
               
208-443
               

               
Cow position:
               
chr28:30303452-30303213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
20, 37
               

               
Conread position:
               
208-487
               

               
Cow position:
               
chr28:23480521-23480240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
18, 234
               

               
Conread position:
               
208-497
               

               
Cow position:
               
chr28:26269070-26269359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
20, 147
               

               
Conread position:
               
208-508
               

               
Cow position:
               
chr28:25424562-25424255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
14, 142
               

               
Conread position:
               
208-515
               

               
Cow position:
               
chr28:25563816-25564131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
13, 181
               

               
Conread position:
               
208-537
               

               
Cow position:
               
chr28:9426601-9426281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
27, 80
               

               
Conread position:
               
208-538
               

               
Cow position:
               
chr28:5771107-5771435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
20, 210
               

               
Conread position:
               
208-540
               

               
Cow position:
               
chr28:7698240-7697911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
103, 38
               

               
Conread position:
               
208-540
               

               
Cow position:
               
chr28:14150975-14151293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
27, 150
               

               
Conread position:
               
208-540
               

               
Cow position:
               
chr28:26533283-26533614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
23, 230
               

               
Conread position:
               
208-541
               

               
Cow position:
               
chr28:16204593-16204262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 232
               

               
Conread position:
               
208-542
               

               
Cow position:
               
chr28:5792443-5792781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
20, 235
               

               
Conread position:
               
208-542
               

               
Cow position:
               
chr28:15677640-15677959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
112, 17
               

               
Conread position:
               
208-542
               

               
Cow position:
               
chr28:19222404-19222078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
20, 40
               

               
Conread position:
               
208-542
               

               
Cow position:
               
chr28:26743363-26743699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
20, 40
               

               
Conread position:
               
208-543
               

               
Cow position:
               
chr28:16211356-16211025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
18, 190
               

               
Conread position:
               
208-550
               

               
Cow position:
               
chr28:12619303-12619657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
208-552
               

               
Cow position:
               
chr28:3408476-3408136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
18, 39
               

               
Conread position:
               
208-552
               

               
Cow position:
               
chr28:10589288-10588938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
20, 144
               

               
Conread position:
               
208-552
               

               
Cow position:
               
chr28:19026262-19025922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 88
               

               
Conread position:
               
209-540
               

               
Cow position:
               
chr28:8022369-8022032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 77
               

               
Conread position:
               
211-542
               

               
Cow position:
               
chr28:33051764-33052110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 239
               

               
Conread position:
               
212-490
               

               
Cow position:
               
chr28:22739546-22739813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
144, 79
               

               
Conread position:
               
212-542
               

               
Cow position:
               
chr28:5144779-5144448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
22, 178
               

               
Conread position:
               
213-436
               

               
Cow position:
               
chr28:11451722-11451490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
9, 209
               

               
Conread position:
               
213-542
               

               
Cow position:
               
chr28:5826693-5827023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
9, 94
               

               
Conread position:
               
214-540
               

               
Cow position:
               
chr28:9099683-9100004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
52, 12
               

               
Conread position:
               
215-540
               

               
Cow position:
               
chr28:5273676-5273359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
114, 9
               

               
Conread position:
               
216-517
               

               
Cow position:
               
chr28:5904485-5904780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 22
               

               
Conread position:
               
216-542
               

               
Cow position:
               
chr28:15263977-15263645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
5, 235
               

               
Conread position:
               
216-547
               

               
Cow position:
               
chr28:3745950-3746280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
12, 193
               

               
Conread position:
               
216-552
               

               
Cow position:
               
chr28:33163719-33163381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 232
               

               
Conread position:
               
217-464
               

               
Cow position:
               
chr28:10642270-10642019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
5, 143
               

               
Conread position:
               
217-540
               

               
Cow position:
               
chr28:16085074-16085396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
11, 85
               

               
Conread position:
               
217-541
               

               
Cow position:
               
chr28:20124534-20124857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 224
               

               
Conread position:
               
217-542
               

               
Cow position:
               
chr28:20313024-20313350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 58
               

               
Conread position:
               
217-549
               

               
Cow position:
               
chr28:31841588-31841267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
102, 8
               

               
Conread position:
               
219-540
               

               
Cow position:
               
chr28:11818211-11817896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
10, 147
               

               
Conread position:
               
220-393
               

               
Cow position:
               
chr28:32813246-32813063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
8, 54
               

               
Conread position:
               
220-447
               

               
Cow position:
               
chr28:13242071-13241840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
8, 118
               

               
Conread position:
               
220-473
               

               
Cow position:
               
chr28:16386753-16386502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
8, 217
               

               
Conread position:
               
220-542
               

               
Cow position:
               
chr28:13607638-13607971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
6, 93
               

               
Conread position:
               
220-552
               

               
Cow position:
               
chr28:3024159-3023830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 169
               

               
Conread position:
               
221-491
               

               
Cow position:
               
chr28:24646294-24646561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
7, 168
               

               
Conread position:
               
221-538
               

               
Cow position:
               
chr28:9177000-9176682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
7, 160
               

               
Conread position:
               
221-538
               

               
Cow position:
               
chr28:16686787-16687096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
92, 155
               

               
Conread position:
               
221-542
               

               
Cow position:
               
chr28:616157-616459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
221-542
               

               
Cow position:
               
chr28:23675898-23676211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 79
               

               
Conread position:
               
221-542
               

               
Cow position:
               
chr28:29434671-29434355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
7, 139
               

               
Conread position:
               
222-473
               

               
Cow position:
               
chr28:7590426-7590177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
98, 211
               

               
Conread position:
               
222-540
               

               
Cow position:
               
chr28:26719115-26719414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
6, 41
               

               
Conread position:
               
227-352
               

               
Cow position:
               
chr28:12934001-12933872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
227-474
               

               
Cow position:
               
chr28:19394390-19394624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
17, 85
               

               
Conread position:
               
227-542
               

               
Cow position:
               
chr28:25249116-25249427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
93, 77
               

               
Conread position:
               
229-435
               

               
Cow position:
               
chr28:13447471-13447670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
122, 73
               

               
Conread position:
               
231-472
               

               
Cow position:
               
chr28:16364204-16363962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
76, 177
               

               
Conread position:
               
232-409
               

               
Cow position:
               
chr28:17362813-17362642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
90, 41
               

               
Conread position:
               
232-542
               

               
Cow position:
               
chr28:5366364-5366051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
90, 22
               

               
Conread position:
               
233-526
               

               
Cow position:
               
chr28:18717356-18717073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
48, 171
               

               
Conread position:
               
233-538
               

               
Cow position:
               
chr28:21380640-21380950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 210
               

               
Conread position:
               
233-542
               

               
Cow position:
               
chr28:2132156-2131851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
88, 116
               

               
Conread position:
               
233-547
               

               
Cow position:
               
chr28:8347502-8347809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 14
               

               
Conread position:
               
234-368
               

               
Cow position:
               
chr28:3740620-3740751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
234-373
               

               
Cow position:
               
chr28:34844482-34844345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
99, 87
               

               
Conread position:
               
234-381
               

               
Cow position:
               
chr28:3480036-3480191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
234-381
               

               
Cow position:
               
chr28:8372238-8372393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
234-398
               

               
Cow position:
               
chr28:20760156-20759984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
234-403
               

               
Cow position:
               
chr28:16441155-16441324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
117, 43
               

               
Conread position:
               
234-410
               

               
Cow position:
               
chr28:3246105-3246279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
83, 27
               

               
Conread position:
               
234-420
               

               
Cow position:
               
chr28:22132694-22132884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
79, 113
               

               
Conread position:
               
234-421
               

               
Cow position:
               
chr28:11759769-11759589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
86, 49
               

               
Conread position:
               
234-421
               

               
Cow position:
               
chr28:17738311-17738115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
234-427
               

               
Cow position:
               
chr28:7328670-7328860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
234-427
               

               
Cow position:
               
chr28:14657468-14657667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
234-432
               

               
Cow position:
               
chr28:17287992-17288188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
63, 108
               

               
Conread position:
               
234-435
               

               
Cow position:
               
chr28:28076640-28076437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
234-438
               

               
Cow position:
               
chr28:25498736-25498530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
85, 129
               

               
Conread position:
               
234-439
               

               
Cow position:
               
chr28:26340104-26340319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
77, 152
               

               
Conread position:
               
234-442
               

               
Cow position:
               
chr28:2340299-2340513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
76, 120
               

               
Conread position:
               
234-446
               

               
Cow position:
               
chr28:10456754-10456547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
102, 82
               

               
Conread position:
               
234-446
               

               
Cow position:
               
chr28:15375058-15374837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
77, 145
               

               
Conread position:
               
234-446
               

               
Cow position:
               
chr28:34636446-34636651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
50, 55
               

               
Conread position:
               
234-449
               

               
Cow position:
               
chr28:11380275-11380055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
85, 134
               

               
Conread position:
               
234-450
               

               
Cow position:
               
chr28:6051500-6051721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
78, 57
               

               
Conread position:
               
234-452
               

               
Cow position:
               
chr28:21873540-21873760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
86, 110
               

               
Conread position:
               
234-453
               

               
Cow position:
               
chr28:15272493-15272273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
82, 123
               

               
Conread position:
               
234-453
               

               
Cow position:
               
chr28:30961690-30961898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
193, 50
               

               
Conread position:
               
234-454
               

               
Cow position:
               
chr28:23775813-23776037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 144
               

               
Conread position:
               
234-460
               

               
Cow position:
               
chr28:8348885-8348657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
77, 176
               

               
Conread position:
               
234-464
               

               
Cow position:
               
chr28:23231299-23231064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
51, 31
               

               
Conread position:
               
234-465
               

               
Cow position:
               
chr28:34082254-34082015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
85, 227
               

               
Conread position:
               
234-470
               

               
Cow position:
               
chr28:17316627-17316866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
66, 12
               

               
Conread position:
               
234-479
               

               
Cow position:
               
chr28:2905348-2905584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 147
               

               
Conread position:
               
234-480
               

               
Cow position:
               
chr28:4938606-4938838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
234-483
               

               
Cow position:
               
chr28:22170950-22170695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
86, 216
               

               
Conread position:
               
234-485
               

               
Cow position:
               
chr28:32747707-32747936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
234-487
               

               
Cow position:
               
chr28:4022150-4022406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
77, 206
               

               
Conread position:
               
234-487
               

               
Cow position:
               
chr28:10212930-10212699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
234-488
               

               
Cow position:
               
chr28:3769887-3769645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
234-488
               

               
Cow position:
               
chr28:10762441-10762680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
234-488
               

               
Cow position:
               
chr28:16401663-16401919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
75, 132
               

               
Conread position:
               
234-488
               

               
Cow position:
               
chr28:25762797-25763055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
89, 55
               

               
Conread position:
               
234-491
               

               
Cow position:
               
chr28:25826103-25825840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
93, 85
               

               
Conread position:
               
234-497
               

               
Cow position:
               
chr28:8084465-8084732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
23, 211
               

               
Conread position:
               
234-526
               

               
Cow position:
               
chr28:4057754-4058039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
87, 48
               

               
Conread position:
               
234-526
               

               
Cow position:
               
chr28:18139684-18139400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
87, 123
               

               
Conread position:
               
234-531
               

               
Cow position:
               
chr28:7751533-7751239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 154
               

               
Conread position:
               
234-533
               

               
Cow position:
               
chr28:4914334-4914027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
80, 203
               

               
Conread position:
               
234-533
               

               
Cow position:
               
chr28:22485016-22485317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
83, 23
               

               
Conread position:
               
234-534
               

               
Cow position:
               
chr28:22323033-22323333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
91, 206
               

               
Conread position:
               
234-534
               

               
Cow position:
               
chr28:28766142-28765838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
87, 159
               

               
Conread position:
               
234-538
               

               
Cow position:
               
chr28:4308130-4307828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
119, 17
               

               
Conread position:
               
234-538
               

               
Cow position:
               
chr28:32300592-32300287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
85, 126
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr28:7144556-7144871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
81, 197
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr28:10529715-10529419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
79, 87
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr28:10744977-10745285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 198
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr28:16109712-16110008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
86, 148
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr28:17638099-17637794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
82, 203
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr28:21363526-21363811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr28:24672041-24672336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
104, 66
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr28:31987371-31987685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
77, 47
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr28:2862629-2862941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 194
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr28:4282724-4282418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
87, 143
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr28:9285610-9285304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 208
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr28:9740239-9740539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
85, 54
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr28:10172646-10172344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 140
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr28:11423036-11422743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr28:11527488-11527186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 60
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr28:11687265-11686955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 272
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr28:23410556-23410250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 101
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr28:25056740-25057039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 169
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr28:25596400-25596701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 149
               

               
Conread position:
               
234-543
               

               
Cow position:
               
chr28:26220029-26220332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
234-543
               

               
Cow position:
               
chr28:34229997-34230302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
77, 186
               

               
Conread position:
               
234-549
               

               
Cow position:
               
chr28:5931121-5931432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 145
               

               
Conread position:
               
234-550
               

               
Cow position:
               
chr28:22345787-22346102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 32
               

               
Conread position:
               
234-551
               

               
Cow position:
               
chr28:22332317-22332610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
234-552
               

               
Cow position:
               
chr28:11884755-11884438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 62
               

               
Conread position:
               
234-552
               

               
Cow position:
               
chr28:26103483-26103785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
254, 85
               

               
Conread position:
               
235-481
               

               
Cow position:
               
chr28:21939964-21940220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
86, 156
               

               
Conread position:
               
235-538
               

               
Cow position:
               
chr28:21354993-21355300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
72, 110
               

               
Conread position:
               
235-542
               

               
Cow position:
               
chr28:8408506-8408807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 44
               

               
Conread position:
               
236-368
               

               
Cow position:
               
chr28:13356816-13356683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
236-381
               

               
Cow position:
               
chr28:16450926-16450784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
84, 40
               

               
Conread position:
               
236-432
               

               
Cow position:
               
chr28:14933731-14933936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
236-432
               

               
Cow position:
               
chr28:30978051-30978243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
141, 122
               

               
Conread position:
               
236-433
               

               
Cow position:
               
chr28:23839978-23840172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
117, 66
               

               
Conread position:
               
236-435
               

               
Cow position:
               
chr28:19222828-19222624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
83, 182
               

               
Conread position:
               
236-437
               

               
Cow position:
               
chr28:3077762-3077965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
236-437
               

               
Cow position:
               
chr28:8656966-8656765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
75, 21
               

               
Conread position:
               
236-441
               

               
Cow position:
               
chr28:28590508-28590716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
77, 162
               

               
Conread position:
               
236-444
               

               
Cow position:
               
chr28:12048930-12048724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
84, 121
               

               
Conread position:
               
236-444
               

               
Cow position:
               
chr28:15688810-15689022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
236-449
               

               
Cow position:
               
chr28:5658323-5658538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
65, 133
               

               
Conread position:
               
236-450
               

               
Cow position:
               
chr28:17029946-17029732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
85, 172
               

               
Conread position:
               
236-453
               

               
Cow position:
               
chr28:7684908-7684691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
83, 29
               

               
Conread position:
               
236-456
               

               
Cow position:
               
chr28:6861722-6861947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
11, 36
               

               
Conread position:
               
236-457
               

               
Cow position:
               
chr28:9822204-9821984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
85, 93
               

               
Conread position:
               
236-473
               

               
Cow position:
               
chr28:5805294-5805514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
236-494
               

               
Cow position:
               
chr28:5553161-5552913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
19, 84
               

               
Conread position:
               
236-497
               

               
Cow position:
               
chr28:15063570-15063311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
51, 150
               

               
Conread position:
               
236-535
               

               
Cow position:
               
chr28:30608412-30608121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
75, 125
               

               
Conread position:
               
236-537
               

               
Cow position:
               
chr28:7549293-7548989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 120
               

               
Conread position:
               
236-538
               

               
Cow position:
               
chr28:20963763-20963460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
60, 139
               

               
Conread position:
               
236-539
               

               
Cow position:
               
chr28:22321191-22321489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
77, 201
               

               
Conread position:
               
236-540
               

               
Cow position:
               
chr28:31110236-31109933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
73, 197
               

               
Conread position:
               
236-540
               

               
Cow position:
               
chr28:34442994-34442687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
77, 203
               

               
Conread position:
               
236-542
               

               
Cow position:
               
chr28:3493015-3492711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 196
               

               
Conread position:
               
236-542
               

               
Cow position:
               
chr28:4070738-4071042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 200
               

               
Conread position:
               
236-542
               

               
Cow position:
               
chr28:6971570-6971275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 141
               

               
Conread position:
               
236-542
               

               
Cow position:
               
chr28:11426776-11426468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 211
               

               
Conread position:
               
236-542
               

               
Cow position:
               
chr28:13474075-13474373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 97
               

               
Conread position:
               
236-542
               

               
Cow position:
               
chr28:14997833-14998140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 25
               

               
Conread position:
               
236-542
               

               
Cow position:
               
chr28:21598484-21598179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 202
               

               
Conread position:
               
236-542
               

               
Cow position:
               
chr28:21672568-21672866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
75, 151
               

               
Conread position:
               
236-542
               

               
Cow position:
               
chr28:21868221-21868530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 209
               

               
Conread position:
               
236-542
               

               
Cow position:
               
chr28:26922595-26922295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 104
               

               
Conread position:
               
236-542
               

               
Cow position:
               
chr28:31648843-31649151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
104, 83
               

               
Conread position:
               
236-545
               

               
Cow position:
               
chr28:21844725-21845033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 161
               

               
Conread position:
               
236-552
               

               
Cow position:
               
chr28:11786939-11786634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
115, 166
               

               
Conread position:
               
236-552
               

               
Cow position:
               
chr28:16346757-16346449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 127
               

               
Conread position:
               
236-552
               

               
Cow position:
               
chr28:16370305-16370000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 167
               

               
Conread position:
               
237-400
               

               
Cow position:
               
chr28:21129351-21129188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
69, 31
               

               
Conread position:
               
237-413
               

               
Cow position:
               
chr28:13371397-13371222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
114, 16
               

               
Conread position:
               
237-430
               

               
Cow position:
               
chr28:12951202-12951397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
237-430
               

               
Cow position:
               
chr28:19295590-19295391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
237-443
               

               
Cow position:
               
chr28:15007935-15008142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
60, 79
               

               
Conread position:
               
237-456
               

               
Cow position:
               
chr28:23621318-23621539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
83, 141
               

               
Conread position:
               
237-490
               

               
Cow position:
               
chr28:6307663-6307913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
77, 14
               

               
Conread position:
               
237-491
               

               
Cow position:
               
chr28:34878202-34877945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
78, 204
               

               
Conread position:
               
237-510
               

               
Cow position:
               
chr28:18790782-18791057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
85, 16
               

               
Conread position:
               
237-521
               

               
Cow position:
               
chr28:23459915-23460199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
85, 191
               

               
Conread position:
               
237-538
               

               
Cow position:
               
chr28:10616181-10615877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
78, 125
               

               
Conread position:
               
237-538
               

               
Cow position:
               
chr28:19080077-19079776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
76, 65
               

               
Conread position:
               
237-540
               

               
Cow position:
               
chr28:7512821-7512513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
85, 210
               

               
Conread position:
               
237-540
               

               
Cow position:
               
chr28:30293819-30293518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
84, 198
               

               
Conread position:
               
237-540
               

               
Cow position:
               
chr28:34430655-34430352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
86, 10
               

               
Conread position:
               
237-541
               

               
Cow position:
               
chr28:2819529-2819849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
82, 154
               

               
Conread position:
               
237-541
               

               
Cow position:
               
chr28:29199497-29199802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 160
               

               
Conread position:
               
237-542
               

               
Cow position:
               
chr28:2898766-2899062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
83, 197
               

               
Conread position:
               
237-542
               

               
Cow position:
               
chr28:3914480-3914790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 209
               

               
Conread position:
               
237-542
               

               
Cow position:
               
chr28:4841626-4841317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
37, 149
               

               
Conread position:
               
237-542
               

               
Cow position:
               
chr28:7268165-7267873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
59, 36
               

               
Conread position:
               
237-542
               

               
Cow position:
               
chr28:13267552-13267862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 210
               

               
Conread position:
               
237-542
               

               
Cow position:
               
chr28:14649119-14649415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 201
               

               
Conread position:
               
237-542
               

               
Cow position:
               
chr28:16919391-16919096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 146
               

               
Conread position:
               
237-542
               

               
Cow position:
               
chr28:30327310-30327018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 13
               

               
Conread position:
               
237-549
               

               
Cow position:
               
chr28:23007955-23007650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
237-552
               

               
Cow position:
               
chr28:1099871-1099581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
83, 117
               

               
Conread position:
               
237-552
               

               
Cow position:
               
chr28:3078907-3078598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 152
               

               
Conread position:
               
237-552
               

               
Cow position:
               
chr28:18591041-18591353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 25
               

               
Conread position:
               
238-370
               

               
Cow position:
               
chr28:16246498-16246363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
82, 13
               

               
Conread position:
               
238-399
               

               
Cow position:
               
chr28:14234744-14234910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
238-410
               

               
Cow position:
               
chr28:9294785-9294962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
83, 54
               

               
Conread position:
               
238-455
               

               
Cow position:
               
chr28:13902187-13901977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
75, 119
               

               
Conread position:
               
238-474
               

               
Cow position:
               
chr28:6577427-6577646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
238-492
               

               
Cow position:
               
chr28:16406858-16407116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
81, 119
               

               
Conread position:
               
238-540
               

               
Cow position:
               
chr28:3144120-3143807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 284
               

               
Conread position:
               
238-540
               

               
Cow position:
               
chr28:10534158-10533864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 23
               

               
Conread position:
               
238-540
               

               
Cow position:
               
chr28:10606848-10606563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
104, 23
               

               
Conread position:
               
238-540
               

               
Cow position:
               
chr28:21104075-21103757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
76, 20
               

               
Conread position:
               
238-540
               

               
Cow position:
               
chr28:27218092-27218393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
85, 204
               

               
Conread position:
               
238-542
               

               
Cow position:
               
chr28:5128956-5128656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 24
               

               
Conread position:
               
238-542
               

               
Cow position:
               
chr28:12964349-12964640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
238-542
               

               
Cow position:
               
chr28:23793531-23793236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
82, 123
               

               
Conread position:
               
238-542
               

               
Cow position:
               
chr28:34133635-34133934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
76, 158
               

               
Conread position:
               
238-543
               

               
Cow position:
               
chr28:13865617-13865916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
102, 54
               

               
Conread position:
               
238-552
               

               
Cow position:
               
chr28:13176907-13176606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
81, 123
               

               
Conread position:
               
239-432
               

               
Cow position:
               
chr28:28414440-28414643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
239-449
               

               
Cow position:
               
chr28:12942155-12942366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
138, 14
               

               
Conread position:
               
239-452
               

               
Cow position:
               
chr28:16215120-16214915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
239-466
               

               
Cow position:
               
chr28:11827266-11827490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
81, 91
               

               
Conread position:
               
239-487
               

               
Cow position:
               
chr28:5773412-5773654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
74, 116
               

               
Conread position:
               
239-487
               

               
Cow position:
               
chr28:16253085-16252838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 197
               

               
Conread position:
               
239-533
               

               
Cow position:
               
chr28:12758736-12758436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
85, 198
               

               
Conread position:
               
239-545
               

               
Cow position:
               
chr28:33884182-33884478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
82, 36
               

               
Conread position:
               
240-447
               

               
Cow position:
               
chr28:30995051-30995265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
67, 162
               

               
Conread position:
               
240-449
               

               
Cow position:
               
chr28:7607001-7607219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
83, 145
               

               
Conread position:
               
240-540
               

               
Cow position:
               
chr28:7228612-7228317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
79, 51
               

               
Conread position:
               
240-540
               

               
Cow position:
               
chr28:12892647-12892366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
13, 65
               

               
Conread position:
               
240-541
               

               
Cow position:
               
chr28:34561132-34561415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
162, 59
               

               
Conread position:
               
240-542
               

               
Cow position:
               
chr28:5203973-5204268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
240-542
               

               
Cow position:
               
chr28:26684886-26685190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
69, 121
               

               
Conread position:
               
240-552
               

               
Cow position:
               
chr28:8787320-8787622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
241-535
               

               
Cow position:
               
chr28:4587870-4588163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 38
               

               
Conread position:
               
241-542
               

               
Cow position:
               
chr28:28163865-28164158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 83
               

               
Conread position:
               
241-552
               

               
Cow position:
               
chr28:7865098-7865412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 41
               

               
Conread position:
               
242-397
               

               
Cow position:
               
chr28:2888205-2888366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
114, 61
               

               
Conread position:
               
242-527
               

               
Cow position:
               
chr28:25701085-25700807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
109, 24
               

               
Conread position:
               
243-456
               

               
Cow position:
               
chr28:8935710-8935927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
71, 174
               

               
Conread position:
               
244-540
               

               
Cow position:
               
chr28:18625000-18625305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
76, 203
               

               
Conread position:
               
245-541
               

               
Cow position:
               
chr28:4016308-4016603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 17
               

               
Conread position:
               
245-541
               

               
Cow position:
               
chr28:25727156-25727444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
54, 59
               

               
Conread position:
               
246-432
               

               
Cow position:
               
chr28:5188622-5188435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
81, 73
               

               
Conread position:
               
246-542
               

               
Cow position:
               
chr28:24966167-24966459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
27, 144
               

               
Conread position:
               
247-412
               

               
Cow position:
               
chr28:8628996-8628824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
247-435
               

               
Cow position:
               
chr28:9108222-9108419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
247-458
               

               
Cow position:
               
chr28:2124211-2124425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
104, 93
               

               
Conread position:
               
247-462
               

               
Cow position:
               
chr28:10035180-10035393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
15, 45
               

               
Conread position:
               
247-487
               

               
Cow position:
               
chr28:7980638-7980399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
56, 156
               

               
Conread position:
               
247-529
               

               
Cow position:
               
chr28:3256573-3256858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 188
               

               
Conread position:
               
247-540
               

               
Cow position:
               
chr28:10053558-10053254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
47, 197
               

               
Conread position:
               
247-540
               

               
Cow position:
               
chr28:23616183-23616478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
76, 191
               

               
Conread position:
               
247-542
               

               
Cow position:
               
chr28:25806363-25806646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
110, 47
               

               
Conread position:
               
247-552
               

               
Cow position:
               
chr28:26614669-26614956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
67, 31
               

               
Conread position:
               
248-530
               

               
Cow position:
               
chr28:2738030-2737745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 194
               

               
Conread position:
               
249-540
               

               
Cow position:
               
chr28:2961042-2960759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 36
               

               
Conread position:
               
251-542
               

               
Cow position:
               
chr28:24017788-24018057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
70, 49
               

               
Conread position:
               
251-547
               

               
Cow position:
               
chr28:22371894-22371605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
46, 153
               

               
Conread position:
               
253-448
               

               
Cow position:
               
chr28:31971964-31971769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
125, 20
               

               
Conread position:
               
253-501
               

               
Cow position:
               
chr28:1837777-1838025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
68, 61
               

               
Conread position:
               
254-539
               

               
Cow position:
               
chr28:12946725-12947019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
53, 163
               

               
Conread position:
               
256-526
               

               
Cow position:
               
chr28:3714591-3714858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
64, 133
               

               
Conread position:
               
256-542
               

               
Cow position:
               
chr28:29416927-29416644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 126
               

               
Conread position:
               
257-542
               

               
Cow position:
               
chr28:5437301-5437012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 185
               

               
Conread position:
               
257-552
               

               
Cow position:
               
chr28:4884476-4884170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 140
               

               
Conread position:
               
262-546
               

               
Cow position:
               
chr28:19054812-19055090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
52, 127
               

               
Conread position:
               
265-540
               

               
Cow position:
               
chr28:4090246-4089987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
55, 163
               

               
Conread position:
               
266-497
               

               
Cow position:
               
chr28:25459325-25459562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
40, 187
               

               
Conread position:
               
266-542
               

               
Cow position:
               
chr28:14512325-14512606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
41, 90
               

               
Conread position:
               
267-538
               

               
Cow position:
               
chr28:27313948-27313662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
55, 161
               

               
Conread position:
               
268-453
               

               
Cow position:
               
chr28:10844920-10845112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
53, 155
               

               
Conread position:
               
268-540
               

               
Cow position:
               
chr28:4138868-4138600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
40, 91
               

               
Conread position:
               
268-541
               

               
Cow position:
               
chr28:4158753-4159027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
26, 40
               

               
Conread position:
               
269-542
               

               
Cow position:
               
chr28:4809596-4809852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
34, 109
               

               
Conread position:
               
269-552
               

               
Cow position:
               
chr28:3169389-3169106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
6, 76
               

               
Conread position:
               
272-540
               

               
Cow position:
               
chr28:10669380-10669655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
42, 58
               

               
Conread position:
               
272-542
               

               
Cow position:
               
chr28:4881440-4881167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
10, 173
               

               
Conread position:
               
274-547
               

               
Cow position:
               
chr28:4835038-4834766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 136
               

               
Conread position:
               
276-487
               

               
Cow position:
               
chr28:118246-118032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
45, 69
               

               
Conread position:
               
276-542
               

               
Cow position:
               
chr28:30937857-30937596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
36, 132
               

               
Conread position:
               
277-440
               

               
Cow position:
               
chr28:3000784-3000617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
42, 107
               

               
Conread position:
               
279-415
               

               
Cow position:
               
chr28:23724643-23724502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
279-538
               

               
Cow position:
               
chr28:26982934-26982669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
42, 169
               

               
Conread position:
               
280-538
               

               
Cow position:
               
chr28:10999855-10999600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
149, 63
               

               
Conread position:
               
280-542
               

               
Cow position:
               
chr28:11829129-11828889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
26, 106
               

               
Conread position:
               
281-487
               

               
Cow position:
               
chr28:19023947-19024163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
40, 117
               

               
Conread position:
               
281-530
               

               
Cow position:
               
chr28:18760228-18759985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
70, 83
               

               
Conread position:
               
281-540
               

               
Cow position:
               
chr28:11866855-11866594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
32, 106
               

               
Conread position:
               
281-542
               

               
Cow position:
               
chr28:6091174-6091436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
30, 119
               

               
Conread position:
               
282-476
               

               
Cow position:
               
chr28:13290319-13290122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
25, 125
               

               
Conread position:
               
286-497
               

               
Cow position:
               
chr28:28903847-28903635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
30, 10
               

               
Conread position:
               
286-542
               

               
Cow position:
               
chr28:18186379-18186629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
289-484
               

               
Cow position:
               
chr28:657625-657436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
22, 113
               

               
Conread position:
               
289-542
               

               
Cow position:
               
chr28:25728028-25728267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
62, 33
               

               
Conread position:
               
290-540
               

               
Cow position:
               
chr28:20409216-20409458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
30, 116
               

               
Conread position:
               
291-540
               

               
Cow position:
               
chr28:26264628-26264898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
304-503
               

               
Cow position:
               
chr28:33032103-33032296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
22, 54
               

               
Conread position:
               
305-442
               

               
Cow position:
               
chr28:29989270-29989135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
306-542
               

               
Cow position:
               
chr28:1632811-1632584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
312-499
               

               
Cow position:
               
chr28:7608130-7607946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
312-539
               

               
Cow position:
               
chr28:33285263-33285039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
202, 71
               

               
Conread position:
               
312-541
               

               
Cow position:
               
chr28:2752647-2752422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
312-542
               

               
Cow position:
               
chr28:2872767-2872992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
313-490
               

               
Cow position:
               
chr28:15577410-15577239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
67, 138
               

               
Conread position:
               
321-473
               

               
Cow position:
               
chr28:10202340-10202478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
322-494
               

               
Cow position:
               
chr28:7542225-7542057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
58, 104
               

               
Conread position:
               
322-534
               

               
Cow position:
               
chr28:10057732-10057522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
34, 117
               

               
Conread position:
               
322-542
               

               
Cow position:
               
chr28:10863922-10863719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
322-542
               

               
Cow position:
               
chr28:27161470-27161254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
29, 19
               

               
Conread position:
               
322-552
               

               
Cow position:
               
chr28:30746868-30746647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
323-544
               

               
Cow position:
               
chr28:22571804-22571593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
324-538
               

               
Cow position:
               
chr28:4763736-4763949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
62, 100
               

               
Conread position:
               
324-538
               

               
Cow position:
               
chr28:32365708-32365913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
325-552
               

               
Cow position:
               
chr28:7009112-7008895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
327-540
               

               
Cow position:
               
chr28:3449164-3449374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
35, 107
               

               
Conread position:
               
328-542
               

               
Cow position:
               
chr28:24082133-24082343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
38, 56
               

               
Conread position:
               
329-550
               

               
Cow position:
               
chr28:5193187-5193409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
22, 8
               

               
Conread position:
               
330-542
               

               
Cow position:
               
chr28:8140350-8140555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
330-549
               

               
Cow position:
               
chr28:11079175-11079381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
336-542
               

               
Cow position:
               
chr28:22813139-22813331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
347-541
               

               
Cow position:
               
chr28:25128768-25128958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
349-542
               

               
Cow position:
               
chr28:5577412-5577602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
143, 79
               

               
Conread position:
               
349-543
               

               
Cow position:
               
chr28:2523828-2524018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
350-546
               

               
Cow position:
               
chr28:3011385-3011194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
75, 90
               

               
Conread position:
               
351-542
               

               
Cow position:
               
chr28:3740770-3740949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
351-551
               

               
Cow position:
               
chr28:16246174-16245983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
355-540
               

               
Cow position:
               
chr28:12363268-12363086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
49, 83
               

               
Conread position:
               
355-547
               

               
Cow position:
               
chr28:19564335-19564150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
360-542
               

               
Cow position:
               
chr28:4181900-4182074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
13, 75
               

               
Conread position:
               
360-542
               

               
Cow position:
               
chr28:7372224-7372049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
372-534
               

               
Cow position:
               
chr28:7927084-7927241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
49, 63
               

               
Conread position:
               
379-542
               

               
Cow position:
               
chr28:7350574-7350727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
385-540
               

               
Cow position:
               
chr28:7619230-7619079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
385-541
               

               
Cow position:
               
chr28:5139074-5138919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
50, 66
               

               
Conread position:
               
385-542
               

               
Cow position:
               
chr28:11348352-11348496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
385-542
               

               
Cow position:
               
chr28:12070158-12070304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
389-540
               

               
Cow position:
               
chr28:3411066-3410916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
9, 56
               

               
Conread position:
               
396-542
               

               
Cow position:
               
chr28:4013020-4013157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
400-539
               

               
Cow position:
               
chr28:3445545-3445412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
405-541
               

               
Cow position:
               
chr28:26531339-26531205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
46, 28
               

               
Conread position:
               
408-541
               

               
Cow position:
               
chr28:4438655-4438783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
411-541
               

               
Cow position:
               
chr28:2762142-2762267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
432-542
               

               
Cow position:
               
chr28:11816704-11816593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
18, 0
               
Show alignments to all cow chromosomes.