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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8027P23.3
        

               
Conread position:
               
4-369
               

               
Cow position:
               
chr3:31309380-31309011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
135, 96
               

               
Conread position:
               
31-497
               

               
Cow position:
               
chr3:56704320-56703851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
47, 51
               

               
Conread position:
               
171-327
               

               
Cow position:
               
chr3:2334963-2335115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
55, 28
               

               
Conread position:
               
171-440
               

               
Cow position:
               
chr3:22872373-22872098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
57, 12
               

               
Conread position:
               
171-452
               

               
Cow position:
               
chr3:16547355-16547642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
57, 27
               

               
Conread position:
               
171-534
               

               
Cow position:
               
chr3:14466025-14465670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
154, 27
               

               
Conread position:
               
171-538
               

               
Cow position:
               
chr3:15954398-15954045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
57, 27
               

               
Conread position:
               
171-540
               

               
Cow position:
               
chr3:5365364-5365719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
57, 27
               

               
Conread position:
               
171-540
               

               
Cow position:
               
chr3:27289616-27289982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
142, 27
               

               
Conread position:
               
171-540
               

               
Cow position:
               
chr3:59001066-59000715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
140, 27
               

               
Conread position:
               
171-545
               

               
Cow position:
               
chr3:35852790-35852423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
57, 22
               

               
Conread position:
               
171-546
               

               
Cow position:
               
chr3:42177839-42178201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
57, 28
               

               
Conread position:
               
172-413
               

               
Cow position:
               
chr3:36657090-36656847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
37, 26
               

               
Conread position:
               
172-436
               

               
Cow position:
               
chr3:21302751-21302494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
54, 26
               

               
Conread position:
               
172-487
               

               
Cow position:
               
chr3:41367303-41366991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 26
               

               
Conread position:
               
172-540
               

               
Cow position:
               
chr3:53593019-53592647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 22
               

               
Conread position:
               
173-429
               

               
Cow position:
               
chr3:6853822-6853566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
55, 35
               

               
Conread position:
               
173-494
               

               
Cow position:
               
chr3:2397102-2396782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 25
               

               
Conread position:
               
173-540
               

               
Cow position:
               
chr3:210003-210361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 26
               

               
Conread position:
               
173-540
               

               
Cow position:
               
chr3:79292516-79292870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 25
               

               
Conread position:
               
173-541
               

               
Cow position:
               
chr3:59798935-59799291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 24
               

               
Conread position:
               
174-437
               

               
Cow position:
               
chr3:15662016-15661754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
57, 23
               

               
Conread position:
               
174-441
               

               
Cow position:
               
chr3:31771382-31771636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
135, 25
               

               
Conread position:
               
174-448
               

               
Cow position:
               
chr3:22021291-22021018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
142, 25
               

               
Conread position:
               
174-496
               

               
Cow position:
               
chr3:45312734-45313048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
54, 24
               

               
Conread position:
               
174-540
               

               
Cow position:
               
chr3:18393702-18393352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 24
               

               
Conread position:
               
174-540
               

               
Cow position:
               
chr3:31309680-31309312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
35, 25
               

               
Conread position:
               
174-542
               

               
Cow position:
               
chr3:26920577-26920952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
54, 24
               

               
Conread position:
               
174-542
               

               
Cow position:
               
chr3:71231088-71231439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
187, 24
               

               
Conread position:
               
174-552
               

               
Cow position:
               
chr3:67704218-67704600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 24
               

               
Conread position:
               
180-497
               

               
Cow position:
               
chr3:20802945-20802621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
38, 19
               

               
Conread position:
               
183-427
               

               
Cow position:
               
chr3:35975414-35975171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
45, 15
               

               
Conread position:
               
184-485
               

               
Cow position:
               
chr3:4031653-4031961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
16, 260
               

               
Conread position:
               
195-542
               

               
Cow position:
               
chr3:51234399-51234052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 239
               

               
Conread position:
               
197-439
               

               
Cow position:
               
chr3:43658009-43657761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
60, 11
               

               
Conread position:
               
197-497
               

               
Cow position:
               
chr3:12286937-12287232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
29, 11
               

               
Conread position:
               
203-506
               

               
Cow position:
               
chr3:23876704-23877005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
19, 228
               

               
Conread position:
               
204-419
               

               
Cow position:
               
chr3:56704831-56704616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
14, 101
               

               
Conread position:
               
204-448
               

               
Cow position:
               
chr3:58174620-58174863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
24, 5
               

               
Conread position:
               
204-540
               

               
Cow position:
               
chr3:15387918-15388261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
18, 200
               

               
Conread position:
               
204-540
               

               
Cow position:
               
chr3:34937551-34937886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
106, 43
               

               
Conread position:
               
204-540
               

               
Cow position:
               
chr3:49650089-49650430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 5
               

               
Conread position:
               
204-541
               

               
Cow position:
               
chr3:65236734-65237067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
22, 5
               

               
Conread position:
               
204-542
               

               
Cow position:
               
chr3:66292470-66292132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 43
               

               
Conread position:
               
205-436
               

               
Cow position:
               
chr3:59208522-59208759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
205-542
               

               
Cow position:
               
chr3:73764485-73764156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 49
               

               
Conread position:
               
206-552
               

               
Cow position:
               
chr3:23408632-23408304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 41
               

               
Conread position:
               
208-351
               

               
Cow position:
               
chr3:6403009-6403156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
208-378
               

               
Cow position:
               
chr3:68514837-68514672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
20, 39
               

               
Conread position:
               
208-381
               

               
Cow position:
               
chr3:22908122-22907941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
208-404
               

               
Cow position:
               
chr3:77276692-77276494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
20, 39
               

               
Conread position:
               
208-409
               

               
Cow position:
               
chr3:18854805-18855013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
208-410
               

               
Cow position:
               
chr3:33253170-33252958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
208-410
               

               
Cow position:
               
chr3:51609528-51609740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
208-410
               

               
Cow position:
               
chr3:53903898-53904098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
20, 154
               

               
Conread position:
               
208-410
               

               
Cow position:
               
chr3:58865747-58865540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
208-416
               

               
Cow position:
               
chr3:83988193-83988408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
20, 150
               

               
Conread position:
               
208-417
               

               
Cow position:
               
chr3:55815056-55815264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
23, 168
               

               
Conread position:
               
208-432
               

               
Cow position:
               
chr3:59630788-59630561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
208-436
               

               
Cow position:
               
chr3:20129653-20129890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
208-436
               

               
Cow position:
               
chr3:31056290-31056058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
20, 154
               

               
Conread position:
               
208-437
               

               
Cow position:
               
chr3:25691461-25691700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
18, 130
               

               
Conread position:
               
208-442
               

               
Cow position:
               
chr3:56637378-56637619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
18, 161
               

               
Conread position:
               
208-450
               

               
Cow position:
               
chr3:79148564-79148311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
20, 229
               

               
Conread position:
               
208-451
               

               
Cow position:
               
chr3:51604895-51604639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
20, 186
               

               
Conread position:
               
208-466
               

               
Cow position:
               
chr3:16004274-16004015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
18, 98
               

               
Conread position:
               
208-471
               

               
Cow position:
               
chr3:58951333-58951588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
20, 160
               

               
Conread position:
               
208-491
               

               
Cow position:
               
chr3:61678403-61678698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
208-501
               

               
Cow position:
               
chr3:69961999-69961712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
18, 210
               

               
Conread position:
               
208-511
               

               
Cow position:
               
chr3:14602001-14601698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
20, 39
               

               
Conread position:
               
208-521
               

               
Cow position:
               
chr3:5851215-5850906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
20, 40
               

               
Conread position:
               
208-529
               

               
Cow position:
               
chr3:29807174-29807494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
20, 234
               

               
Conread position:
               
208-529
               

               
Cow position:
               
chr3:33698433-33698762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
27, 233
               

               
Conread position:
               
208-530
               

               
Cow position:
               
chr3:13513025-13512718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
20, 115
               

               
Conread position:
               
208-534
               

               
Cow position:
               
chr3:19711603-19711302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
23, 72
               

               
Conread position:
               
208-534
               

               
Cow position:
               
chr3:48629874-48629552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
18, 115
               

               
Conread position:
               
208-534
               

               
Cow position:
               
chr3:76138204-76138507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
143, 12
               

               
Conread position:
               
208-537
               

               
Cow position:
               
chr3:53909826-53910148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
55, 39
               

               
Conread position:
               
208-538
               

               
Cow position:
               
chr3:7566707-7566376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
20, 177
               

               
Conread position:
               
208-539
               

               
Cow position:
               
chr3:7763375-7763696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
20, 170
               

               
Conread position:
               
208-540
               

               
Cow position:
               
chr3:14626438-14626108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
20, 37
               

               
Conread position:
               
208-540
               

               
Cow position:
               
chr3:24549120-24548795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
20, 115
               

               
Conread position:
               
208-540
               

               
Cow position:
               
chr3:37599704-37599386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
20, 112
               

               
Conread position:
               
208-540
               

               
Cow position:
               
chr3:48852254-48851928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
20, 30
               

               
Conread position:
               
208-540
               

               
Cow position:
               
chr3:68586750-68587064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
18, 75
               

               
Conread position:
               
208-540
               

               
Cow position:
               
chr3:78076901-78077227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 184
               

               
Conread position:
               
208-540
               

               
Cow position:
               
chr3:79592177-79591849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
20, 230
               

               
Conread position:
               
208-542
               

               
Cow position:
               
chr3:8393655-8393986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
112, 15
               

               
Conread position:
               
208-542
               

               
Cow position:
               
chr3:14552590-14552919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 187
               

               
Conread position:
               
208-542
               

               
Cow position:
               
chr3:15057886-15057576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
18, 109
               

               
Conread position:
               
208-542
               

               
Cow position:
               
chr3:23169358-23169022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 197
               

               
Conread position:
               
208-542
               

               
Cow position:
               
chr3:56059519-56059855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 234
               

               
Conread position:
               
208-542
               

               
Cow position:
               
chr3:64281224-64280886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 236
               

               
Conread position:
               
208-542
               

               
Cow position:
               
chr3:66375033-66375364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
18, 76
               

               
Conread position:
               
208-542
               

               
Cow position:
               
chr3:66610126-66609800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 110
               

               
Conread position:
               
208-542
               

               
Cow position:
               
chr3:70895758-70896092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 193
               

               
Conread position:
               
208-542
               

               
Cow position:
               
chr3:72675799-72676135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 230
               

               
Conread position:
               
208-542
               

               
Cow position:
               
chr3:74533060-74533393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 192
               

               
Conread position:
               
208-543
               

               
Cow position:
               
chr3:35299386-35299713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
20, 95
               

               
Conread position:
               
208-543
               

               
Cow position:
               
chr3:68647872-68648219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
20, 225
               

               
Conread position:
               
208-549
               

               
Cow position:
               
chr3:29887712-29887369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 201
               

               
Conread position:
               
208-552
               

               
Cow position:
               
chr3:5101048-5100718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 44
               

               
Conread position:
               
208-552
               

               
Cow position:
               
chr3:70401615-70401950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 39
               

               
Conread position:
               
209-429
               

               
Cow position:
               
chr3:42588061-42588295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
209-540
               

               
Cow position:
               
chr3:53384570-53384238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 171
               

               
Conread position:
               
209-540
               

               
Cow position:
               
chr3:67929553-67929218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
19, 59
               

               
Conread position:
               
211-538
               

               
Cow position:
               
chr3:66901028-66900693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 199
               

               
Conread position:
               
211-541
               

               
Cow position:
               
chr3:46350370-46350714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
11, 243
               

               
Conread position:
               
211-552
               

               
Cow position:
               
chr3:77365580-77365236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 78
               

               
Conread position:
               
212-390
               

               
Cow position:
               
chr3:61262518-61262703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
212-535
               

               
Cow position:
               
chr3:52722281-52721972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
19, 46
               

               
Conread position:
               
213-487
               

               
Cow position:
               
chr3:22676364-22676106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
217, 55
               

               
Conread position:
               
214-540
               

               
Cow position:
               
chr3:18686636-18686948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
214-542
               

               
Cow position:
               
chr3:75046150-75045834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
63, 16
               

               
Conread position:
               
214-552
               

               
Cow position:
               
chr3:16333523-16333852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
11, 107
               

               
Conread position:
               
215-381
               

               
Cow position:
               
chr3:33693367-33693540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
7, 136
               

               
Conread position:
               
215-487
               

               
Cow position:
               
chr3:24305187-24304926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
7, 56
               

               
Conread position:
               
215-542
               

               
Cow position:
               
chr3:67744910-67744584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
6, 178
               

               
Conread position:
               
216-448
               

               
Cow position:
               
chr3:31298440-31298193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
216-538
               

               
Cow position:
               
chr3:45279179-45279506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
216-542
               

               
Cow position:
               
chr3:29507316-29507626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
28, 147
               

               
Conread position:
               
216-542
               

               
Cow position:
               
chr3:68708281-68707969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 28
               

               
Conread position:
               
217-432
               

               
Cow position:
               
chr3:2483173-2483387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
5, 89
               

               
Conread position:
               
217-488
               

               
Cow position:
               
chr3:80082097-80081823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
5, 40
               

               
Conread position:
               
217-497
               

               
Cow position:
               
chr3:9843304-9843586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
5, 31
               

               
Conread position:
               
217-540
               

               
Cow position:
               
chr3:17695286-17694963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
5, 164
               

               
Conread position:
               
217-540
               

               
Cow position:
               
chr3:52147956-52147609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
93, 7
               

               
Conread position:
               
217-542
               

               
Cow position:
               
chr3:19006387-19006701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 181
               

               
Conread position:
               
217-542
               

               
Cow position:
               
chr3:48296431-48296742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
13, 7
               

               
Conread position:
               
217-542
               

               
Cow position:
               
chr3:50069500-50069807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 86
               

               
Conread position:
               
217-542
               

               
Cow position:
               
chr3:55272320-55272001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 7
               

               
Conread position:
               
218-474
               

               
Cow position:
               
chr3:23944819-23945078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
10, 142
               

               
Conread position:
               
218-477
               

               
Cow position:
               
chr3:35283374-35283110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 28
               

               
Conread position:
               
218-495
               

               
Cow position:
               
chr3:67165636-67165917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
98, 10
               

               
Conread position:
               
218-542
               

               
Cow position:
               
chr3:8060854-8061170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 90
               

               
Conread position:
               
218-542
               

               
Cow position:
               
chr3:14633262-14632939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 10
               

               
Conread position:
               
218-542
               

               
Cow position:
               
chr3:27940402-27940099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
102, 26
               

               
Conread position:
               
218-542
               

               
Cow position:
               
chr3:54770727-54771050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
102, 204
               

               
Conread position:
               
220-442
               

               
Cow position:
               
chr3:41718115-41718344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
6, 18
               

               
Conread position:
               
220-507
               

               
Cow position:
               
chr3:69849778-69849498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
8, 137
               

               
Conread position:
               
220-538
               

               
Cow position:
               
chr3:31225173-31225472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
8, 103
               

               
Conread position:
               
220-540
               

               
Cow position:
               
chr3:23471744-23471417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 172
               

               
Conread position:
               
220-540
               

               
Cow position:
               
chr3:80053810-80053500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
8, 82
               

               
Conread position:
               
220-541
               

               
Cow position:
               
chr3:32584882-32585193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 104
               

               
Conread position:
               
220-541
               

               
Cow position:
               
chr3:64172169-64172483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
6, 67
               

               
Conread position:
               
220-541
               

               
Cow position:
               
chr3:81371380-81371692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 82
               

               
Conread position:
               
220-542
               

               
Cow position:
               
chr3:2393242-2392924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
8, 222
               

               
Conread position:
               
220-542
               

               
Cow position:
               
chr3:15229095-15228779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
8, 101
               

               
Conread position:
               
220-543
               

               
Cow position:
               
chr3:75050893-75050571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
100, 111
               

               
Conread position:
               
221-424
               

               
Cow position:
               
chr3:8457382-8457587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
98, 36
               

               
Conread position:
               
221-443
               

               
Cow position:
               
chr3:78894589-78894370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
7, 80
               

               
Conread position:
               
221-447
               

               
Cow position:
               
chr3:82657360-82657129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
7, 111
               

               
Conread position:
               
221-448
               

               
Cow position:
               
chr3:16810066-16809830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
5, 229
               

               
Conread position:
               
221-491
               

               
Cow position:
               
chr3:51146941-51146673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
7, 146
               

               
Conread position:
               
221-534
               

               
Cow position:
               
chr3:75158090-75158397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 89
               

               
Conread position:
               
221-537
               

               
Cow position:
               
chr3:59366272-59366593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
7, 219
               

               
Conread position:
               
221-538
               

               
Cow position:
               
chr3:53588665-53588343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
7, 78
               

               
Conread position:
               
221-539
               

               
Cow position:
               
chr3:63203170-63203477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
7, 101
               

               
Conread position:
               
221-540
               

               
Cow position:
               
chr3:36672280-36671953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
7, 226
               

               
Conread position:
               
221-540
               

               
Cow position:
               
chr3:48241346-48241656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 99
               

               
Conread position:
               
221-542
               

               
Cow position:
               
chr3:54740146-54739843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
275, 100
               

               
Conread position:
               
221-549
               

               
Cow position:
               
chr3:24852862-24852546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
7, 156
               

               
Conread position:
               
221-549
               

               
Cow position:
               
chr3:39171759-39171435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 219
               

               
Conread position:
               
221-552
               

               
Cow position:
               
chr3:5096928-5097261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 221
               

               
Conread position:
               
227-409
               

               
Cow position:
               
chr3:44861576-44861385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
227-447
               

               
Cow position:
               
chr3:17952388-17952613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
227-450
               

               
Cow position:
               
chr3:26970558-26970787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
76, 19
               

               
Conread position:
               
227-542
               

               
Cow position:
               
chr3:70899632-70899935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
228-497
               

               
Cow position:
               
chr3:62883935-62884207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
21, 71
               

               
Conread position:
               
228-540
               

               
Cow position:
               
chr3:54903302-54903606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
85, 18
               

               
Conread position:
               
228-541
               

               
Cow position:
               
chr3:58540801-58540479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
12, 220
               

               
Conread position:
               
230-460
               

               
Cow position:
               
chr3:50123776-50123552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
123, 67
               

               
Conread position:
               
230-540
               

               
Cow position:
               
chr3:39661716-39661415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
26, 173
               

               
Conread position:
               
232-429
               

               
Cow position:
               
chr3:61361140-61361344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
42, 14
               

               
Conread position:
               
232-464
               

               
Cow position:
               
chr3:76188432-76188659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
145, 15
               

               
Conread position:
               
232-542
               

               
Cow position:
               
chr3:54782273-54781959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 30
               

               
Conread position:
               
232-548
               

               
Cow position:
               
chr3:54881493-54881816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
73, 241
               

               
Conread position:
               
233-432
               

               
Cow position:
               
chr3:44535029-44534819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
233-449
               

               
Cow position:
               
chr3:19717349-19717135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
86, 105
               

               
Conread position:
               
233-516
               

               
Cow position:
               
chr3:8752533-8752806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
11, 84
               

               
Conread position:
               
233-520
               

               
Cow position:
               
chr3:45524002-45524289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
88, 73
               

               
Conread position:
               
233-531
               

               
Cow position:
               
chr3:61171772-61171475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
83, 188
               

               
Conread position:
               
233-540
               

               
Cow position:
               
chr3:57763961-57764260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 203
               

               
Conread position:
               
233-542
               

               
Cow position:
               
chr3:69750963-69750667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 131
               

               
Conread position:
               
233-547
               

               
Cow position:
               
chr3:54945863-54946181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 17
               

               
Conread position:
               
234-349
               

               
Cow position:
               
chr3:9638854-9638736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
87, 69
               

               
Conread position:
               
234-368
               

               
Cow position:
               
chr3:8901160-8901296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
73, 27
               

               
Conread position:
               
234-388
               

               
Cow position:
               
chr3:78546358-78546196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
234-407
               

               
Cow position:
               
chr3:8557042-8556869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
80, 61
               

               
Conread position:
               
234-407
               

               
Cow position:
               
chr3:83369061-83369232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
121, 141
               

               
Conread position:
               
234-409
               

               
Cow position:
               
chr3:42461439-42461619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
75, 123
               

               
Conread position:
               
234-417
               

               
Cow position:
               
chr3:70913340-70913151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
234-418
               

               
Cow position:
               
chr3:11640173-11640360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
234-419
               

               
Cow position:
               
chr3:55970964-55971154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
234-428
               

               
Cow position:
               
chr3:83920937-83921134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
88, 155
               

               
Conread position:
               
234-429
               

               
Cow position:
               
chr3:66978582-66978774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
87, 123
               

               
Conread position:
               
234-430
               

               
Cow position:
               
chr3:48370870-48371075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
234-430
               

               
Cow position:
               
chr3:55117233-55117026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
234-430
               

               
Cow position:
               
chr3:81939990-81940196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
234-431
               

               
Cow position:
               
chr3:33633148-33632952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
64, 104
               

               
Conread position:
               
234-432
               

               
Cow position:
               
chr3:1299972-1300171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
32, 118
               

               
Conread position:
               
234-436
               

               
Cow position:
               
chr3:31419440-31419647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
234-437
               

               
Cow position:
               
chr3:15158780-15158988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
234-438
               

               
Cow position:
               
chr3:11254410-11254213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
234-440
               

               
Cow position:
               
chr3:32597189-32596978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
234-442
               

               
Cow position:
               
chr3:12323804-12324025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
79, 47
               

               
Conread position:
               
234-443
               

               
Cow position:
               
chr3:27285964-27286185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
234-447
               

               
Cow position:
               
chr3:32869888-32870106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
234-447
               

               
Cow position:
               
chr3:42603569-42603791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
66, 147
               

               
Conread position:
               
234-449
               

               
Cow position:
               
chr3:34316225-34315999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
234-452
               

               
Cow position:
               
chr3:74699656-74699433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
76, 39
               

               
Conread position:
               
234-453
               

               
Cow position:
               
chr3:48566928-48566701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
98, 166
               

               
Conread position:
               
234-453
               

               
Cow position:
               
chr3:72776979-72777215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
63, 140
               

               
Conread position:
               
234-453
               

               
Cow position:
               
chr3:74088435-74088202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
79, 159
               

               
Conread position:
               
234-457
               

               
Cow position:
               
chr3:17284575-17284812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
24, 76
               

               
Conread position:
               
234-466
               

               
Cow position:
               
chr3:19198420-19198647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
80, 123
               

               
Conread position:
               
234-466
               

               
Cow position:
               
chr3:60892371-60892598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
85, 123
               

               
Conread position:
               
234-469
               

               
Cow position:
               
chr3:63861162-63860918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
79, 181
               

               
Conread position:
               
234-470
               

               
Cow position:
               
chr3:13118084-13118314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
86, 105
               

               
Conread position:
               
234-470
               

               
Cow position:
               
chr3:20663799-20663561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
85, 208
               

               
Conread position:
               
234-470
               

               
Cow position:
               
chr3:46161106-46160871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
82, 123
               

               
Conread position:
               
234-470
               

               
Cow position:
               
chr3:78201006-78201240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
76, 169
               

               
Conread position:
               
234-471
               

               
Cow position:
               
chr3:61191178-61190951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
234-477
               

               
Cow position:
               
chr3:7858091-7858352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
70, 223
               

               
Conread position:
               
234-483
               

               
Cow position:
               
chr3:2903551-2903308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
73, 123
               

               
Conread position:
               
234-485
               

               
Cow position:
               
chr3:77496556-77496816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 206
               

               
Conread position:
               
234-486
               

               
Cow position:
               
chr3:30701061-30701298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
61, 82
               

               
Conread position:
               
234-487
               

               
Cow position:
               
chr3:18066873-18067130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
72, 209
               

               
Conread position:
               
234-487
               

               
Cow position:
               
chr3:19789380-19789125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 158
               

               
Conread position:
               
234-487
               

               
Cow position:
               
chr3:73590259-73590005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
86, 27
               

               
Conread position:
               
234-487
               

               
Cow position:
               
chr3:77227057-77227314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
87, 214
               

               
Conread position:
               
234-488
               

               
Cow position:
               
chr3:4332102-4332355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
85, 189
               

               
Conread position:
               
234-491
               

               
Cow position:
               
chr3:51255523-51255781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
37, 208
               

               
Conread position:
               
234-494
               

               
Cow position:
               
chr3:84000351-84000609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
77, 199
               

               
Conread position:
               
234-495
               

               
Cow position:
               
chr3:17451195-17450942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
85, 140
               

               
Conread position:
               
234-497
               

               
Cow position:
               
chr3:364480-364213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
79, 201
               

               
Conread position:
               
234-497
               

               
Cow position:
               
chr3:78530275-78530536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
21, 127
               

               
Conread position:
               
234-501
               

               
Cow position:
               
chr3:59514850-59515107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
234-502
               

               
Cow position:
               
chr3:74621258-74620985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
86, 202
               

               
Conread position:
               
234-511
               

               
Cow position:
               
chr3:62999266-62998994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
87, 146
               

               
Conread position:
               
234-513
               

               
Cow position:
               
chr3:79208264-79207969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
79, 159
               

               
Conread position:
               
234-519
               

               
Cow position:
               
chr3:48530376-48530654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
86, 145
               

               
Conread position:
               
234-521
               

               
Cow position:
               
chr3:21341225-21340938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 46
               

               
Conread position:
               
234-529
               

               
Cow position:
               
chr3:63179607-63179888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
117, 87
               

               
Conread position:
               
234-531
               

               
Cow position:
               
chr3:43528498-43528199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
85, 136
               

               
Conread position:
               
234-534
               

               
Cow position:
               
chr3:12255219-12255515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
87, 46
               

               
Conread position:
               
234-534
               

               
Cow position:
               
chr3:83816054-83815751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 118
               

               
Conread position:
               
234-535
               

               
Cow position:
               
chr3:73443348-73443055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 187
               

               
Conread position:
               
234-537
               

               
Cow position:
               
chr3:39066072-39066372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
90, 155
               

               
Conread position:
               
234-538
               

               
Cow position:
               
chr3:2506742-2506438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
85, 209
               

               
Conread position:
               
234-538
               

               
Cow position:
               
chr3:17456530-17456228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
79, 149
               

               
Conread position:
               
234-538
               

               
Cow position:
               
chr3:37451808-37452109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
54, 203
               

               
Conread position:
               
234-538
               

               
Cow position:
               
chr3:42423592-42423288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 195
               

               
Conread position:
               
234-538
               

               
Cow position:
               
chr3:49461198-49460886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 204
               

               
Conread position:
               
234-538
               

               
Cow position:
               
chr3:57754745-57754436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
86, 189
               

               
Conread position:
               
234-538
               

               
Cow position:
               
chr3:63147405-63147110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
93, 124
               

               
Conread position:
               
234-539
               

               
Cow position:
               
chr3:6689730-6690041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
18, 224
               

               
Conread position:
               
234-539
               

               
Cow position:
               
chr3:14801490-14801785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
61, 120
               

               
Conread position:
               
234-539
               

               
Cow position:
               
chr3:55124539-55124239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
86, 125
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr3:525093-525388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 0
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr3:4457337-4457029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
88, 127
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr3:13302117-13301808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
51, 205
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr3:14263131-14263435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
85, 218
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr3:17222405-17222100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 71
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr3:25690524-25690835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
87, 187
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr3:26065740-26066042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 200
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr3:30463427-30463130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
85, 133
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr3:31206611-31206918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
82, 187
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr3:36570311-36570003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
72, 172
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr3:49119293-49118991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
20, 210
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr3:49382691-49382991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
92, 85
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr3:51578582-51578279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 124
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr3:53112907-53113217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 201
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr3:53150066-53150373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 111
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr3:53270565-53270872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 207
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr3:54050280-54049989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
91, 60
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr3:56582582-56582890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
81, 135
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr3:60933154-60933459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
88, 166
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr3:61539535-61539843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
90, 229
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr3:61857235-61857548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
80, 201
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr3:77188181-77188480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
118, 82
               

               
Conread position:
               
234-541
               

               
Cow position:
               
chr3:66885299-66884987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
79, 150
               

               
Conread position:
               
234-541
               

               
Cow position:
               
chr3:71430473-71430161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 215
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr3:72154-72473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
86, 67
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr3:2674768-2675073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 105
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr3:3985069-3985366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 201
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr3:4461750-4461440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 110
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr3:8393085-8393391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
82, 186
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr3:17895593-17895893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
265, 57
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr3:17937100-17936795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 150
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr3:45534560-45534252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 12
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr3:45647414-45647724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 160
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr3:45881648-45881942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 147
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr3:48362822-48363116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
87, 37
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr3:55085445-55085125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
86, 211
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr3:58969157-58968859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 75
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr3:59101574-59101871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
123, 71
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr3:59596943-59597222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
214, 35
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr3:60597287-60597585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 55
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr3:61224996-61224700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
87, 70
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr3:61278645-61278953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
73, 207
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr3:62826884-62826575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 211
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr3:64011078-64010768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
88, 54
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr3:72018858-72019160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
121, 179
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr3:73394855-73395160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
75, 209
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr3:73460718-73461010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 17
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr3:80818468-80818761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
88, 28
               

               
Conread position:
               
234-543
               

               
Cow position:
               
chr3:66708333-66708022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
86, 215
               

               
Conread position:
               
234-543
               

               
Cow position:
               
chr3:75080505-75080808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 157
               

               
Conread position:
               
234-545
               

               
Cow position:
               
chr3:7331377-7331080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 12
               

               
Conread position:
               
234-547
               

               
Cow position:
               
chr3:28908456-28908154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
86, 69
               

               
Conread position:
               
234-547
               

               
Cow position:
               
chr3:80581410-80581704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
117, 84
               

               
Conread position:
               
234-548
               

               
Cow position:
               
chr3:38346940-38347241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
85, 104
               

               
Conread position:
               
234-549
               

               
Cow position:
               
chr3:6873506-6873201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
85, 59
               

               
Conread position:
               
234-549
               

               
Cow position:
               
chr3:67544135-67543818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
62, 208
               

               
Conread position:
               
234-549
               

               
Cow position:
               
chr3:69417049-69416730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
89, 208
               

               
Conread position:
               
234-549
               

               
Cow position:
               
chr3:71161533-71161850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
89, 206
               

               
Conread position:
               
234-549
               

               
Cow position:
               
chr3:73467358-73467682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
87, 48
               

               
Conread position:
               
234-549
               

               
Cow position:
               
chr3:74611301-74611614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
35, 171
               

               
Conread position:
               
234-552
               

               
Cow position:
               
chr3:59691643-59691941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
234-552
               

               
Cow position:
               
chr3:61840028-61840329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
234-552
               

               
Cow position:
               
chr3:68627936-68627635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
234-552
               

               
Cow position:
               
chr3:70565999-70565684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 207
               

               
Conread position:
               
235-393
               

               
Cow position:
               
chr3:22716540-22716379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
86, 154
               

               
Conread position:
               
235-408
               

               
Cow position:
               
chr3:51012793-51012615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
235-409
               

               
Cow position:
               
chr3:61467345-61467525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
78, 148
               

               
Conread position:
               
235-452
               

               
Cow position:
               
chr3:30055706-30055481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
88, 81
               

               
Conread position:
               
235-540
               

               
Cow position:
               
chr3:1830823-1830534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
235-540
               

               
Cow position:
               
chr3:2024924-2025240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 178
               

               
Conread position:
               
235-540
               

               
Cow position:
               
chr3:11987070-11987371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
83, 200
               

               
Conread position:
               
235-540
               

               
Cow position:
               
chr3:18184808-18185117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
82, 199
               

               
Conread position:
               
235-540
               

               
Cow position:
               
chr3:53573010-53572710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 119
               

               
Conread position:
               
235-540
               

               
Cow position:
               
chr3:79220589-79220900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
9, 82
               

               
Conread position:
               
235-540
               

               
Cow position:
               
chr3:79902243-79902538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
81, 198
               

               
Conread position:
               
235-542
               

               
Cow position:
               
chr3:75711058-75711350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
236-349
               

               
Cow position:
               
chr3:57022315-57022428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
236-361
               

               
Cow position:
               
chr3:78093924-78093800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
64, 81
               

               
Conread position:
               
236-381
               

               
Cow position:
               
chr3:84368629-84368482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
236-398
               

               
Cow position:
               
chr3:18607108-18607279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
12, 144
               

               
Conread position:
               
236-405
               

               
Cow position:
               
chr3:34392356-34392183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
236-410
               

               
Cow position:
               
chr3:26493484-26493302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
74, 17
               

               
Conread position:
               
236-414
               

               
Cow position:
               
chr3:64536802-64536628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
47, 17
               

               
Conread position:
               
236-432
               

               
Cow position:
               
chr3:47284578-47284776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
83, 165
               

               
Conread position:
               
236-439
               

               
Cow position:
               
chr3:46094577-46094781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
54, 139
               

               
Conread position:
               
236-444
               

               
Cow position:
               
chr3:49218567-49218360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
95, 53
               

               
Conread position:
               
236-444
               

               
Cow position:
               
chr3:59205981-59206197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
85, 207
               

               
Conread position:
               
236-463
               

               
Cow position:
               
chr3:20155570-20155800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
84, 206
               

               
Conread position:
               
236-480
               

               
Cow position:
               
chr3:5899566-5899807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
84, 30
               

               
Conread position:
               
236-480
               

               
Cow position:
               
chr3:67161672-67161926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
58, 213
               

               
Conread position:
               
236-483
               

               
Cow position:
               
chr3:29812984-29813230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 203
               

               
Conread position:
               
236-484
               

               
Cow position:
               
chr3:26682053-26681815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 98
               

               
Conread position:
               
236-486
               

               
Cow position:
               
chr3:49731897-49731651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
84, 101
               

               
Conread position:
               
236-487
               

               
Cow position:
               
chr3:42489566-42489312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
80, 32
               

               
Conread position:
               
236-487
               

               
Cow position:
               
chr3:49230751-49231006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
85, 189
               

               
Conread position:
               
236-487
               

               
Cow position:
               
chr3:54959931-54960179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
84, 138
               

               
Conread position:
               
236-488
               

               
Cow position:
               
chr3:13330032-13329783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
165, 80
               

               
Conread position:
               
236-494
               

               
Cow position:
               
chr3:28692689-28692433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
117, 178
               

               
Conread position:
               
236-496
               

               
Cow position:
               
chr3:48269604-48269863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
77, 137
               

               
Conread position:
               
236-507
               

               
Cow position:
               
chr3:59451335-59451603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
126, 51
               

               
Conread position:
               
236-508
               

               
Cow position:
               
chr3:20471619-20471354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
60, 138
               

               
Conread position:
               
236-521
               

               
Cow position:
               
chr3:13899712-13899424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
83, 209
               

               
Conread position:
               
236-537
               

               
Cow position:
               
chr3:46900935-46901238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
60, 132
               

               
Conread position:
               
236-538
               

               
Cow position:
               
chr3:72390821-72391122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
83, 201
               

               
Conread position:
               
236-540
               

               
Cow position:
               
chr3:28898482-28898181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
75, 196
               

               
Conread position:
               
236-540
               

               
Cow position:
               
chr3:29891676-29891367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
83, 43
               

               
Conread position:
               
236-540
               

               
Cow position:
               
chr3:52863443-52863142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
92, 17
               

               
Conread position:
               
236-540
               

               
Cow position:
               
chr3:57577435-57577739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
85, 171
               

               
Conread position:
               
236-540
               

               
Cow position:
               
chr3:59649000-59649300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
116, 15
               

               
Conread position:
               
236-540
               

               
Cow position:
               
chr3:72473649-72473957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
88, 17
               

               
Conread position:
               
236-540
               

               
Cow position:
               
chr3:79884746-79884444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
78, 200
               

               
Conread position:
               
236-541
               

               
Cow position:
               
chr3:54434714-54435019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
84, 125
               

               
Conread position:
               
236-541
               

               
Cow position:
               
chr3:61143834-61144137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
83, 189
               

               
Conread position:
               
236-541
               

               
Cow position:
               
chr3:65968895-65969210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 212
               

               
Conread position:
               
236-541
               

               
Cow position:
               
chr3:83474488-83474788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 108
               

               
Conread position:
               
236-542
               

               
Cow position:
               
chr3:10958488-10958196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
236-542
               

               
Cow position:
               
chr3:20437905-20437612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
236-542
               

               
Cow position:
               
chr3:27546093-27545775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
89, 14
               

               
Conread position:
               
236-542
               

               
Cow position:
               
chr3:50614381-50614685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
86, 17
               

               
Conread position:
               
236-542
               

               
Cow position:
               
chr3:50768419-50768723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 200
               

               
Conread position:
               
236-542
               

               
Cow position:
               
chr3:59604611-59604887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
236-542
               

               
Cow position:
               
chr3:65058442-65058742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
82, 41
               

               
Conread position:
               
236-542
               

               
Cow position:
               
chr3:65413535-65413234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 48
               

               
Conread position:
               
236-542
               

               
Cow position:
               
chr3:81471360-81471052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
77, 188
               

               
Conread position:
               
236-549
               

               
Cow position:
               
chr3:38691665-38691355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 95
               

               
Conread position:
               
236-549
               

               
Cow position:
               
chr3:71246777-71247072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
120, 64
               

               
Conread position:
               
236-552
               

               
Cow position:
               
chr3:56476424-56476736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 11
               

               
Conread position:
               
237-381
               

               
Cow position:
               
chr3:12670948-12670806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
237-403
               

               
Cow position:
               
chr3:65020076-65020248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
237-417
               

               
Cow position:
               
chr3:68342513-68342327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
237-421
               

               
Cow position:
               
chr3:58383710-58383896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
83, 159
               

               
Conread position:
               
237-424
               

               
Cow position:
               
chr3:82473797-82473991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
237-425
               

               
Cow position:
               
chr3:22170932-22171121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
237-425
               

               
Cow position:
               
chr3:58286156-58285965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
83, 152
               

               
Conread position:
               
237-426
               

               
Cow position:
               
chr3:18557926-18558106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
83, 33
               

               
Conread position:
               
237-432
               

               
Cow position:
               
chr3:23277802-23277602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
18, 174
               

               
Conread position:
               
237-435
               

               
Cow position:
               
chr3:27544587-27544389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
103, 79
               

               
Conread position:
               
237-441
               

               
Cow position:
               
chr3:77467676-77467886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
237-442
               

               
Cow position:
               
chr3:2630540-2630745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
32, 69
               

               
Conread position:
               
237-442
               

               
Cow position:
               
chr3:23476740-23476952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
77, 205
               

               
Conread position:
               
237-443
               

               
Cow position:
               
chr3:8604272-8604063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
82, 200
               

               
Conread position:
               
237-444
               

               
Cow position:
               
chr3:56161049-56161260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
70, 109
               

               
Conread position:
               
237-449
               

               
Cow position:
               
chr3:45307676-45307891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
72, 124
               

               
Conread position:
               
237-457
               

               
Cow position:
               
chr3:32399512-32399293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
82, 190
               

               
Conread position:
               
237-472
               

               
Cow position:
               
chr3:49454977-49455220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
237-475
               

               
Cow position:
               
chr3:2008011-2008248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
195, 126
               

               
Conread position:
               
237-481
               

               
Cow position:
               
chr3:4087424-4087176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
83, 219
               

               
Conread position:
               
237-490
               

               
Cow position:
               
chr3:30358892-30358641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
76, 199
               

               
Conread position:
               
237-491
               

               
Cow position:
               
chr3:5416489-5416227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
79, 92
               

               
Conread position:
               
237-511
               

               
Cow position:
               
chr3:14625646-14625377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
34, 93
               

               
Conread position:
               
237-520
               

               
Cow position:
               
chr3:74499966-74500265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
82, 215
               

               
Conread position:
               
237-533
               

               
Cow position:
               
chr3:17957209-17957502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 24
               

               
Conread position:
               
237-535
               

               
Cow position:
               
chr3:82020102-82019802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 139
               

               
Conread position:
               
237-537
               

               
Cow position:
               
chr3:7338032-7337744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
84, 147
               

               
Conread position:
               
237-538
               

               
Cow position:
               
chr3:77224862-77225158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
83, 118
               

               
Conread position:
               
237-539
               

               
Cow position:
               
chr3:23448389-23448096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
237-539
               

               
Cow position:
               
chr3:30179825-30180127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 199
               

               
Conread position:
               
237-540
               

               
Cow position:
               
chr3:2216101-2216410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 199
               

               
Conread position:
               
237-540
               

               
Cow position:
               
chr3:29596136-29596432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
83, 148
               

               
Conread position:
               
237-540
               

               
Cow position:
               
chr3:30009168-30008866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
85, 120
               

               
Conread position:
               
237-540
               

               
Cow position:
               
chr3:44101724-44102010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
114, 50
               

               
Conread position:
               
237-540
               

               
Cow position:
               
chr3:52607925-52608224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 165
               

               
Conread position:
               
237-540
               

               
Cow position:
               
chr3:63507523-63507218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
31, 86
               

               
Conread position:
               
237-540
               

               
Cow position:
               
chr3:71237899-71238195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
83, 36
               

               
Conread position:
               
237-541
               

               
Cow position:
               
chr3:19708358-19708065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
77, 13
               

               
Conread position:
               
237-541
               

               
Cow position:
               
chr3:80564702-80565009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 58
               

               
Conread position:
               
237-542
               

               
Cow position:
               
chr3:9641306-9641612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 197
               

               
Conread position:
               
237-542
               

               
Cow position:
               
chr3:10347097-10347395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 198
               

               
Conread position:
               
237-542
               

               
Cow position:
               
chr3:12712181-12711871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 206
               

               
Conread position:
               
237-542
               

               
Cow position:
               
chr3:17935181-17934894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
237-542
               

               
Cow position:
               
chr3:37041169-37041463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
237-542
               

               
Cow position:
               
chr3:45647881-45648174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
237-542
               

               
Cow position:
               
chr3:71497403-71497094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 152
               

               
Conread position:
               
237-542
               

               
Cow position:
               
chr3:73759775-73759473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
84, 31
               

               
Conread position:
               
237-542
               

               
Cow position:
               
chr3:74600860-74601158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
84, 10
               

               
Conread position:
               
237-542
               

               
Cow position:
               
chr3:80071858-80072173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 211
               

               
Conread position:
               
237-543
               

               
Cow position:
               
chr3:52017499-52017816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
88, 212
               

               
Conread position:
               
237-543
               

               
Cow position:
               
chr3:68583261-68582954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
84, 187
               

               
Conread position:
               
237-544
               

               
Cow position:
               
chr3:65800334-65800631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 134
               

               
Conread position:
               
237-552
               

               
Cow position:
               
chr3:39970130-39969808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 207
               

               
Conread position:
               
237-552
               

               
Cow position:
               
chr3:53739448-53739131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 205
               

               
Conread position:
               
237-552
               

               
Cow position:
               
chr3:72131555-72131244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
65, 153
               

               
Conread position:
               
237-552
               

               
Cow position:
               
chr3:77271525-77271224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
237-552
               

               
Cow position:
               
chr3:81277961-81277638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 208
               

               
Conread position:
               
237-552
               

               
Cow position:
               
chr3:83442138-83441839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
70, 32
               

               
Conread position:
               
237-552
               

               
Cow position:
               
chr3:83455410-83455098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
82, 128
               

               
Conread position:
               
238-428
               

               
Cow position:
               
chr3:8716989-8717189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
84, 25
               

               
Conread position:
               
238-432
               

               
Cow position:
               
chr3:13577443-13577248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
82, 119
               

               
Conread position:
               
238-444
               

               
Cow position:
               
chr3:49337471-49337676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
78, 35
               

               
Conread position:
               
238-488
               

               
Cow position:
               
chr3:42483643-42483898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
82, 197
               

               
Conread position:
               
238-493
               

               
Cow position:
               
chr3:54862679-54862417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
69, 207
               

               
Conread position:
               
238-535
               

               
Cow position:
               
chr3:83490819-83491123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
64, 212
               

               
Conread position:
               
238-539
               

               
Cow position:
               
chr3:27532919-27532613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
75, 82
               

               
Conread position:
               
238-540
               

               
Cow position:
               
chr3:49482963-49482674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
83, 14
               

               
Conread position:
               
238-540
               

               
Cow position:
               
chr3:53046914-53046621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 161
               

               
Conread position:
               
238-541
               

               
Cow position:
               
chr3:22820312-22820614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 66
               

               
Conread position:
               
238-541
               

               
Cow position:
               
chr3:53429147-53428874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
238-543
               

               
Cow position:
               
chr3:5374076-5374375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 160
               

               
Conread position:
               
238-552
               

               
Cow position:
               
chr3:80740315-80740616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
239-424
               

               
Cow position:
               
chr3:23269846-23270031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
116, 64
               

               
Conread position:
               
239-430
               

               
Cow position:
               
chr3:81401563-81401367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
11, 116
               

               
Conread position:
               
239-439
               

               
Cow position:
               
chr3:55445108-55445309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
80, 26
               

               
Conread position:
               
239-487
               

               
Cow position:
               
chr3:70333732-70333492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
81, 98
               

               
Conread position:
               
239-507
               

               
Cow position:
               
chr3:8147922-8147658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
13, 190
               

               
Conread position:
               
239-538
               

               
Cow position:
               
chr3:55970248-55970547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
80, 200
               

               
Conread position:
               
239-539
               

               
Cow position:
               
chr3:82460928-82461220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
117, 53
               

               
Conread position:
               
239-541
               

               
Cow position:
               
chr3:37186577-37186870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
89, 79
               

               
Conread position:
               
239-542
               

               
Cow position:
               
chr3:26553968-26553671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
112, 197
               

               
Conread position:
               
239-542
               

               
Cow position:
               
chr3:73708793-73709091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 34
               

               
Conread position:
               
239-547
               

               
Cow position:
               
chr3:33327448-33327758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
80, 142
               

               
Conread position:
               
239-552
               

               
Cow position:
               
chr3:13353101-13353415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 203
               

               
Conread position:
               
240-388
               

               
Cow position:
               
chr3:59392365-59392207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
68, 141
               

               
Conread position:
               
240-474
               

               
Cow position:
               
chr3:52650788-52650552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
85, 77
               

               
Conread position:
               
240-489
               

               
Cow position:
               
chr3:48578586-48578833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
80, 41
               

               
Conread position:
               
240-531
               

               
Cow position:
               
chr3:18497767-18498049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
116, 163
               

               
Conread position:
               
240-542
               

               
Cow position:
               
chr3:56626-56333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 84
               

               
Conread position:
               
240-542
               

               
Cow position:
               
chr3:16752508-16752215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
79, 132
               

               
Conread position:
               
240-542
               

               
Cow position:
               
chr3:48252638-48252929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
13, 36
               

               
Conread position:
               
240-542
               

               
Cow position:
               
chr3:68881367-68881077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
81, 35
               

               
Conread position:
               
241-453
               

               
Cow position:
               
chr3:12675290-12675071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
52, 171
               

               
Conread position:
               
241-507
               

               
Cow position:
               
chr3:25754782-25755033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 84
               

               
Conread position:
               
241-541
               

               
Cow position:
               
chr3:29360392-29360107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
43, 32
               

               
Conread position:
               
241-542
               

               
Cow position:
               
chr3:74233941-74234230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
55, 142
               

               
Conread position:
               
242-442
               

               
Cow position:
               
chr3:31501094-31501302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
71, 164
               

               
Conread position:
               
242-491
               

               
Cow position:
               
chr3:74409238-74409478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
242-538
               

               
Cow position:
               
chr3:18217018-18216725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
77, 19
               

               
Conread position:
               
242-542
               

               
Cow position:
               
chr3:70334955-70334651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
12, 28
               

               
Conread position:
               
243-491
               

               
Cow position:
               
chr3:16362990-16362742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
76, 189
               

               
Conread position:
               
245-426
               

               
Cow position:
               
chr3:7678421-7678603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
245-435
               

               
Cow position:
               
chr3:15080989-15080802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
68, 120
               

               
Conread position:
               
245-436
               

               
Cow position:
               
chr3:5045060-5044858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
245-437
               

               
Cow position:
               
chr3:41328205-41328392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
59, 54
               

               
Conread position:
               
245-444
               

               
Cow position:
               
chr3:67044347-67044147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
75, 112
               

               
Conread position:
               
245-489
               

               
Cow position:
               
chr3:15752878-15752640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 119
               

               
Conread position:
               
245-495
               

               
Cow position:
               
chr3:57554096-57553851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
76, 46
               

               
Conread position:
               
245-538
               

               
Cow position:
               
chr3:36100578-36100878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
69, 200
               

               
Conread position:
               
245-539
               

               
Cow position:
               
chr3:4049960-4050234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
113, 32
               

               
Conread position:
               
245-542
               

               
Cow position:
               
chr3:42584292-42584586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
65, 127
               

               
Conread position:
               
245-542
               

               
Cow position:
               
chr3:52652324-52652036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
75, 129
               

               
Conread position:
               
245-542
               

               
Cow position:
               
chr3:59473862-59474166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
107, 83
               

               
Conread position:
               
246-393
               

               
Cow position:
               
chr3:23417117-23416967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
54, 141
               

               
Conread position:
               
246-408
               

               
Cow position:
               
chr3:9116657-9116812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
65, 125
               

               
Conread position:
               
246-450
               

               
Cow position:
               
chr3:82359796-82359999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
73, 141
               

               
Conread position:
               
246-538
               

               
Cow position:
               
chr3:18459769-18459488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
74, 187
               

               
Conread position:
               
246-542
               

               
Cow position:
               
chr3:26219311-26219007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 141
               

               
Conread position:
               
246-542
               

               
Cow position:
               
chr3:74878838-74878545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
74, 23
               

               
Conread position:
               
246-547
               

               
Cow position:
               
chr3:27274283-27274577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 127
               

               
Conread position:
               
246-549
               

               
Cow position:
               
chr3:23092232-23091925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
73, 216
               

               
Conread position:
               
247-403
               

               
Cow position:
               
chr3:14717557-14717722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
14, 148
               

               
Conread position:
               
247-427
               

               
Cow position:
               
chr3:26894413-26894597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
65, 57
               

               
Conread position:
               
247-444
               

               
Cow position:
               
chr3:22924646-22924454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
179, 27
               

               
Conread position:
               
247-488
               

               
Cow position:
               
chr3:49787158-49787404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
72, 178
               

               
Conread position:
               
247-523
               

               
Cow position:
               
chr3:55947327-55947609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
73, 190
               

               
Conread position:
               
247-533
               

               
Cow position:
               
chr3:15052193-15051916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
247-534
               

               
Cow position:
               
chr3:44932260-44932552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 200
               

               
Conread position:
               
247-535
               

               
Cow position:
               
chr3:63332562-63332855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
62, 193
               

               
Conread position:
               
247-540
               

               
Cow position:
               
chr3:2680263-2680555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
55, 189
               

               
Conread position:
               
247-540
               

               
Cow position:
               
chr3:43233255-43233548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
66, 181
               

               
Conread position:
               
247-542
               

               
Cow position:
               
chr3:49327688-49327988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 201
               

               
Conread position:
               
247-542
               

               
Cow position:
               
chr3:55189999-55189709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 63
               

               
Conread position:
               
247-542
               

               
Cow position:
               
chr3:57624219-57624508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 125
               

               
Conread position:
               
247-543
               

               
Cow position:
               
chr3:78946084-78945797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
67, 23
               

               
Conread position:
               
247-552
               

               
Cow position:
               
chr3:26903867-26904164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
73, 159
               

               
Conread position:
               
247-552
               

               
Cow position:
               
chr3:58767031-58767317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
247-552
               

               
Cow position:
               
chr3:59610972-59610664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 176
               

               
Conread position:
               
248-542
               

               
Cow position:
               
chr3:3738237-3738525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 131
               

               
Conread position:
               
249-487
               

               
Cow position:
               
chr3:59271305-59271532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
249-528
               

               
Cow position:
               
chr3:75057365-75057104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
249-542
               

               
Cow position:
               
chr3:11711707-11712009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
65, 24
               

               
Conread position:
               
249-542
               

               
Cow position:
               
chr3:23445136-23444844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 155
               

               
Conread position:
               
249-542
               

               
Cow position:
               
chr3:55836075-55835777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 194
               

               
Conread position:
               
249-552
               

               
Cow position:
               
chr3:115961-116243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 20
               

               
Conread position:
               
251-408
               

               
Cow position:
               
chr3:35074437-35074600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
71, 39
               

               
Conread position:
               
251-438
               

               
Cow position:
               
chr3:77006261-77006439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
251-512
               

               
Cow position:
               
chr3:49793165-49793411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
257, 58
               

               
Conread position:
               
251-542
               

               
Cow position:
               
chr3:75479768-75480043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
252-542
               

               
Cow position:
               
chr3:53221771-53222057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 159
               

               
Conread position:
               
253-535
               

               
Cow position:
               
chr3:60265479-60265217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
20, 68
               

               
Conread position:
               
253-542
               

               
Cow position:
               
chr3:12705801-12705499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 190
               

               
Conread position:
               
255-529
               

               
Cow position:
               
chr3:83201768-83201493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
66, 160
               

               
Conread position:
               
255-541
               

               
Cow position:
               
chr3:78092746-78092468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 14
               

               
Conread position:
               
255-542
               

               
Cow position:
               
chr3:53790781-53790493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 187
               

               
Conread position:
               
256-454
               

               
Cow position:
               
chr3:80922329-80922538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
55, 194
               

               
Conread position:
               
256-540
               

               
Cow position:
               
chr3:2518776-2518497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
57, 181
               

               
Conread position:
               
256-542
               

               
Cow position:
               
chr3:22232882-22232610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
257-409
               

               
Cow position:
               
chr3:4861451-4861605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
56, 129
               

               
Conread position:
               
258-422
               

               
Cow position:
               
chr3:29334751-29334580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
258-542
               

               
Cow position:
               
chr3:13507226-13507512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 137
               

               
Conread position:
               
259-400
               

               
Cow position:
               
chr3:79196614-79196471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
260-540
               

               
Cow position:
               
chr3:188624-188914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
63, 173
               

               
Conread position:
               
260-542
               

               
Cow position:
               
chr3:17447843-17447571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 82
               

               
Conread position:
               
260-549
               

               
Cow position:
               
chr3:31047184-31046901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
47, 16
               

               
Conread position:
               
261-540
               

               
Cow position:
               
chr3:21547337-21547058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
5, 140
               

               
Conread position:
               
261-542
               

               
Cow position:
               
chr3:68156496-68156767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
42, 116
               

               
Conread position:
               
262-521
               

               
Cow position:
               
chr3:55106676-55106416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
39, 173
               

               
Conread position:
               
262-552
               

               
Cow position:
               
chr3:67930411-67930133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
7, 38
               

               
Conread position:
               
263-540
               

               
Cow position:
               
chr3:15672376-15672112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
181, 53
               

               
Conread position:
               
265-474
               

               
Cow position:
               
chr3:49140263-49140063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
265-497
               

               
Cow position:
               
chr3:59333537-59333769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
48, 128
               

               
Conread position:
               
266-542
               

               
Cow position:
               
chr3:59621865-59621604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
266-552
               

               
Cow position:
               
chr3:76015070-76015346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
85, 43
               

               
Conread position:
               
267-433
               

               
Cow position:
               
chr3:15192336-15192507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
57, 152
               

               
Conread position:
               
267-540
               

               
Cow position:
               
chr3:68146064-68145801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
53, 36
               

               
Conread position:
               
268-542
               

               
Cow position:
               
chr3:15506220-15506492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
53, 138
               

               
Conread position:
               
269-432
               

               
Cow position:
               
chr3:53240047-53240203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
269-542
               

               
Cow position:
               
chr3:38863891-38864170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
269-543
               

               
Cow position:
               
chr3:26960821-26960543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
52, 174
               

               
Conread position:
               
270-490
               

               
Cow position:
               
chr3:30417904-30418128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
44, 176
               

               
Conread position:
               
270-540
               

               
Cow position:
               
chr3:56301573-56301316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
52, 156
               

               
Conread position:
               
270-548
               

               
Cow position:
               
chr3:74134480-74134755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
50, 111
               

               
Conread position:
               
271-381
               

               
Cow position:
               
chr3:53084176-53084068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
271-542
               

               
Cow position:
               
chr3:74754105-74754369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
32, 108
               

               
Conread position:
               
273-491
               

               
Cow position:
               
chr3:2198660-2198876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
41, 158
               

               
Conread position:
               
274-540
               

               
Cow position:
               
chr3:36375768-36375498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
47, 9
               

               
Conread position:
               
274-542
               

               
Cow position:
               
chr3:11063157-11063411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
38, 132
               

               
Conread position:
               
276-474
               

               
Cow position:
               
chr3:27212143-27212340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
44, 161
               

               
Conread position:
               
276-540
               

               
Cow position:
               
chr3:67698060-67698318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
44, 99
               

               
Conread position:
               
278-541
               

               
Cow position:
               
chr3:63269012-63269266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
28, 12
               

               
Conread position:
               
278-542
               

               
Cow position:
               
chr3:23105583-23105318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 160
               

               
Conread position:
               
279-441
               

               
Cow position:
               
chr3:55063084-55062917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
36, 108
               

               
Conread position:
               
279-497
               

               
Cow position:
               
chr3:15859887-15859667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
42, 104
               

               
Conread position:
               
279-531
               

               
Cow position:
               
chr3:35005561-35005809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
40, 79
               

               
Conread position:
               
279-538
               

               
Cow position:
               
chr3:45211079-45211341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
35, 113
               

               
Conread position:
               
279-540
               

               
Cow position:
               
chr3:25944861-25945135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
279-542
               

               
Cow position:
               
chr3:4319494-4319755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
42, 105
               

               
Conread position:
               
280-542
               

               
Cow position:
               
chr3:70609407-70609670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 118
               

               
Conread position:
               
280-542
               

               
Cow position:
               
chr3:76713537-76713281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
43, 49
               

               
Conread position:
               
281-483
               

               
Cow position:
               
chr3:3062348-3062553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
76, 42
               

               
Conread position:
               
281-519
               

               
Cow position:
               
chr3:39328186-39328421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
76, 42
               

               
Conread position:
               
281-542
               

               
Cow position:
               
chr3:54506506-54506751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
281-542
               

               
Cow position:
               
chr3:83845690-83845957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
37, 165
               

               
Conread position:
               
283-540
               

               
Cow position:
               
chr3:55319110-55318855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
66, 24
               

               
Conread position:
               
285-542
               

               
Cow position:
               
chr3:78896444-78896691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
66, 27
               

               
Conread position:
               
289-540
               

               
Cow position:
               
chr3:27697189-27696936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
25, 147
               

               
Conread position:
               
290-523
               

               
Cow position:
               
chr3:77665976-77665745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
147, 15
               

               
Conread position:
               
290-540
               

               
Cow position:
               
chr3:55712220-55712482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
290-540
               

               
Cow position:
               
chr3:57760293-57760540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
30, 150
               

               
Conread position:
               
293-497
               

               
Cow position:
               
chr3:7940758-7940554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
27, 148
               

               
Conread position:
               
295-542
               

               
Cow position:
               
chr3:10896637-10896866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
295-542
               

               
Cow position:
               
chr3:20678029-20677798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
304-540
               

               
Cow position:
               
chr3:13890276-13890519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
16, 135
               

               
Conread position:
               
304-542
               

               
Cow position:
               
chr3:30940625-30940850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
17, 69
               

               
Conread position:
               
305-455
               

               
Cow position:
               
chr3:78739671-78739819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
121, 18
               

               
Conread position:
               
305-542
               

               
Cow position:
               
chr3:24352675-24352904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
305-552
               

               
Cow position:
               
chr3:74079825-74079583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
306-492
               

               
Cow position:
               
chr3:25059892-25060074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
51, 129
               

               
Conread position:
               
306-540
               

               
Cow position:
               
chr3:55434142-55434371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
36, 10
               

               
Conread position:
               
309-542
               

               
Cow position:
               
chr3:56523612-56523402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
310-540
               

               
Cow position:
               
chr3:30222003-30222233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
15, 121
               

               
Conread position:
               
310-552
               

               
Cow position:
               
chr3:76922844-76922609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
312-442
               

               
Cow position:
               
chr3:8790770-8790640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
50, 45
               

               
Conread position:
               
312-528
               

               
Cow position:
               
chr3:70631839-70632051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
177, 45
               

               
Conread position:
               
312-535
               

               
Cow position:
               
chr3:75853510-75853291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
79, 129
               

               
Conread position:
               
312-541
               

               
Cow position:
               
chr3:79094227-79094000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
135, 122
               

               
Conread position:
               
312-542
               

               
Cow position:
               
chr3:34669907-34669689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
40, 123
               

               
Conread position:
               
312-552
               

               
Cow position:
               
chr3:34556417-34556186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
125, 57
               

               
Conread position:
               
312-552
               

               
Cow position:
               
chr3:70762302-70762069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
313-449
               

               
Cow position:
               
chr3:36418644-36418507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
112, 66
               

               
Conread position:
               
314-540
               

               
Cow position:
               
chr3:62046485-62046706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
168, 76
               

               
Conread position:
               
316-545
               

               
Cow position:
               
chr3:34294460-34294221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
317-540
               

               
Cow position:
               
chr3:9663346-9663130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
40, 75
               

               
Conread position:
               
318-544
               

               
Cow position:
               
chr3:43726905-43727125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
320-542
               

               
Cow position:
               
chr3:26874419-26874634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
49, 15
               

               
Conread position:
               
322-533
               

               
Cow position:
               
chr3:53095105-53094896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
34, 107
               

               
Conread position:
               
322-537
               

               
Cow position:
               
chr3:15751891-15751673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
35, 157
               

               
Conread position:
               
322-540
               

               
Cow position:
               
chr3:32787291-32787502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
40, 31
               

               
Conread position:
               
322-540
               

               
Cow position:
               
chr3:44837550-44837334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
34, 61
               

               
Conread position:
               
322-540
               

               
Cow position:
               
chr3:79092564-79092350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
34, 108
               

               
Conread position:
               
322-542
               

               
Cow position:
               
chr3:60264884-60264672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
322-544
               

               
Cow position:
               
chr3:55819578-55819804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
322-545
               

               
Cow position:
               
chr3:19792723-19792952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
322-547
               

               
Cow position:
               
chr3:54374030-54373811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
9, 113
               

               
Conread position:
               
323-527
               

               
Cow position:
               
chr3:15992546-15992747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
323-534
               

               
Cow position:
               
chr3:48810805-48810609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
323-540
               

               
Cow position:
               
chr3:24935203-24935407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
324-538
               

               
Cow position:
               
chr3:83798006-83797794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
33, 105
               

               
Conread position:
               
324-540
               

               
Cow position:
               
chr3:3913618-3913400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
32, 116
               

               
Conread position:
               
324-540
               

               
Cow position:
               
chr3:26489252-26489038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
32, 103
               

               
Conread position:
               
324-542
               

               
Cow position:
               
chr3:35153454-35153661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
324-542
               

               
Cow position:
               
chr3:55109782-55109569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
325-535
               

               
Cow position:
               
chr3:73915970-73915770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
51, 103
               

               
Conread position:
               
325-542
               

               
Cow position:
               
chr3:68616491-68616286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
326-541
               

               
Cow position:
               
chr3:48073039-48072839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
326-542
               

               
Cow position:
               
chr3:76268146-76267931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
32, 8
               

               
Conread position:
               
327-543
               

               
Cow position:
               
chr3:59884237-59884024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
31, 108
               

               
Conread position:
               
330-547
               

               
Cow position:
               
chr3:53508460-53508660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
331-540
               

               
Cow position:
               
chr3:74242835-74243035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
139, 59
               

               
Conread position:
               
332-540
               

               
Cow position:
               
chr3:59034874-59035082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
25, 106
               

               
Conread position:
               
332-543
               

               
Cow position:
               
chr3:79645603-79645391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
24, 109
               

               
Conread position:
               
333-542
               

               
Cow position:
               
chr3:15153534-15153735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
333-542
               

               
Cow position:
               
chr3:20993653-20993857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
333-552
               

               
Cow position:
               
chr3:77581950-77582159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
18, 95
               

               
Conread position:
               
334-542
               

               
Cow position:
               
chr3:19585704-19585907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
335-531
               

               
Cow position:
               
chr3:32184177-32183985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
337-540
               

               
Cow position:
               
chr3:81039900-81039706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
15, 98
               

               
Conread position:
               
342-541
               

               
Cow position:
               
chr3:22221170-22221370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
10, 30
               

               
Conread position:
               
342-542
               

               
Cow position:
               
chr3:79196610-79196803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
343-547
               

               
Cow position:
               
chr3:46541976-46541780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
345-542
               

               
Cow position:
               
chr3:3883965-3883771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
345-552
               

               
Cow position:
               
chr3:62789326-62789121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
346-511
               

               
Cow position:
               
chr3:75105230-75105070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
43, 16
               

               
Conread position:
               
346-542
               

               
Cow position:
               
chr3:55177898-55177702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
7, 93
               

               
Conread position:
               
348-542
               

               
Cow position:
               
chr3:1785385-1785201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
349-552
               

               
Cow position:
               
chr3:58318097-58317894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
8, 87
               

               
Conread position:
               
350-542
               

               
Cow position:
               
chr3:73820511-73820325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
350-552
               

               
Cow position:
               
chr3:17331585-17331776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
352-552
               

               
Cow position:
               
chr3:15951053-15950859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
17, 84
               

               
Conread position:
               
353-541
               

               
Cow position:
               
chr3:17235347-17235168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
143, 25
               

               
Conread position:
               
353-542
               

               
Cow position:
               
chr3:63177339-63177527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
21, 85
               

               
Conread position:
               
353-552
               

               
Cow position:
               
chr3:78093522-78093335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
354-541
               

               
Cow position:
               
chr3:73237057-73237239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
355-542
               

               
Cow position:
               
chr3:61116994-61116809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
23, 89
               

               
Conread position:
               
360-543
               

               
Cow position:
               
chr3:22509895-22510072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
360-552
               

               
Cow position:
               
chr3:84175957-84175769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
66, 80
               

               
Conread position:
               
365-538
               

               
Cow position:
               
chr3:21015087-21014916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
159, 72
               

               
Conread position:
               
365-540
               

               
Cow position:
               
chr3:75090348-75090518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
20, 63
               

               
Conread position:
               
372-540
               

               
Cow position:
               
chr3:58134807-58134644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
375-552
               

               
Cow position:
               
chr3:69785740-69785570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
118, 21
               

               
Conread position:
               
377-542
               

               
Cow position:
               
chr3:19162502-19162655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
377-542
               

               
Cow position:
               
chr3:46108699-46108862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
378-534
               

               
Cow position:
               
chr3:6520089-6519926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
9, 128
               

               
Conread position:
               
383-530
               

               
Cow position:
               
chr3:75907272-75907410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
383-531
               

               
Cow position:
               
chr3:12670724-12670580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
383-542
               

               
Cow position:
               
chr3:3316921-3316772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
384-539
               

               
Cow position:
               
chr3:44625271-44625122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
385-542
               

               
Cow position:
               
chr3:31361312-31361469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
112, 7
               

               
Conread position:
               
385-542
               

               
Cow position:
               
chr3:55983988-55984142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
385-547
               

               
Cow position:
               
chr3:9116921-9117076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
150, 39
               

               
Conread position:
               
386-542
               

               
Cow position:
               
chr3:22165523-22165372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
389-540
               

               
Cow position:
               
chr3:51349712-51349865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
389-542
               

               
Cow position:
               
chr3:19626612-19626462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
393-541
               

               
Cow position:
               
chr3:64135616-64135761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
394-541
               

               
Cow position:
               
chr3:47753126-47753269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
394-552
               

               
Cow position:
               
chr3:54030181-54030335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
394-552
               

               
Cow position:
               
chr3:75608399-75608552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
395-552
               

               
Cow position:
               
chr3:3471941-3472094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
395-552
               

               
Cow position:
               
chr3:18607565-18607724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
397-544
               

               
Cow position:
               
chr3:4548920-4549073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
402-552
               

               
Cow position:
               
chr3:71474498-71474350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
403-542
               

               
Cow position:
               
chr3:82629224-82629360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
403-552
               

               
Cow position:
               
chr3:31350194-31350050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
404-542
               

               
Cow position:
               
chr3:70614574-70614443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
404-551
               

               
Cow position:
               
chr3:478888-478747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
407-542
               

               
Cow position:
               
chr3:64196739-64196870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
27, 0
               
Show alignments to all cow chromosomes.