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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8027P23.3
        

               
Conread position:
               
2-186
               

               
Cow position:
               
chr9:4341126-4341304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
104, 91
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chr9:45285502-45285687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
101, 139
               

               
Conread position:
               
169-420
               

               
Cow position:
               
chr9:7866394-7866139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
57, 23
               

               
Conread position:
               
171-458
               

               
Cow position:
               
chr9:31077351-31077647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
60, 21
               

               
Conread position:
               
171-469
               

               
Cow position:
               
chr9:8868808-8869109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
57, 27
               

               
Conread position:
               
171-523
               

               
Cow position:
               
chr9:22361340-22360990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 21
               

               
Conread position:
               
171-540
               

               
Cow position:
               
chr9:9199458-9199819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
55, 27
               

               
Conread position:
               
171-541
               

               
Cow position:
               
chr9:35167498-35167138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 38
               

               
Conread position:
               
171-542
               

               
Cow position:
               
chr9:4858865-4858496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
56, 115
               

               
Conread position:
               
171-542
               

               
Cow position:
               
chr9:5510051-5509685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 27
               

               
Conread position:
               
171-542
               

               
Cow position:
               
chr9:10308680-10309035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
73, 27
               

               
Conread position:
               
171-542
               

               
Cow position:
               
chr9:17740618-17740980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 25
               

               
Conread position:
               
171-542
               

               
Cow position:
               
chr9:19714397-19714041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
27, 36
               

               
Conread position:
               
171-542
               

               
Cow position:
               
chr9:28726399-28726763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 21
               

               
Conread position:
               
171-542
               

               
Cow position:
               
chr9:56032002-56032354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
57, 26
               

               
Conread position:
               
171-552
               

               
Cow position:
               
chr9:33218625-33218998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 27
               

               
Conread position:
               
172-366
               

               
Cow position:
               
chr9:32787778-32787979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
50, 32
               

               
Conread position:
               
172-436
               

               
Cow position:
               
chr9:34523552-34523298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
37, 26
               

               
Conread position:
               
173-413
               

               
Cow position:
               
chr9:58647367-58647126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
53, 25
               

               
Conread position:
               
173-538
               

               
Cow position:
               
chr9:13994513-13994130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
140, 25
               

               
Conread position:
               
173-540
               

               
Cow position:
               
chr9:55074810-55075165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 26
               

               
Conread position:
               
173-542
               

               
Cow position:
               
chr9:5763305-5763670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 26
               

               
Conread position:
               
173-542
               

               
Cow position:
               
chr9:28948178-28947823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
26, 50
               

               
Conread position:
               
174-435
               

               
Cow position:
               
chr9:53608070-53608333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
147, 24
               

               
Conread position:
               
174-456
               

               
Cow position:
               
chr9:34310358-34310065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
52, 18
               

               
Conread position:
               
174-511
               

               
Cow position:
               
chr9:18162828-18163168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
54, 25
               

               
Conread position:
               
174-528
               

               
Cow position:
               
chr9:13205246-13205594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 23
               

               
Conread position:
               
174-542
               

               
Cow position:
               
chr9:21459831-21460190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 24
               

               
Conread position:
               
175-542
               

               
Cow position:
               
chr9:9461334-9461696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
147, 23
               

               
Conread position:
               
176-542
               

               
Cow position:
               
chr9:16300246-16300608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 22
               

               
Conread position:
               
190-432
               

               
Cow position:
               
chr9:31626460-31626215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
38, 19
               

               
Conread position:
               
194-552
               

               
Cow position:
               
chr9:26344678-26345017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 14
               

               
Conread position:
               
199-421
               

               
Cow position:
               
chr9:3807435-3807665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
29, 10
               

               
Conread position:
               
202-545
               

               
Cow position:
               
chr9:59794978-59795330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
13, 78
               

               
Conread position:
               
203-442
               

               
Cow position:
               
chr9:58669676-58669429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
110, 5
               

               
Conread position:
               
203-488
               

               
Cow position:
               
chr9:54997722-54998014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
9, 245
               

               
Conread position:
               
203-540
               

               
Cow position:
               
chr9:11192871-11193213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
116, 31
               

               
Conread position:
               
204-540
               

               
Cow position:
               
chr9:64559592-64559919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
116, 5
               

               
Conread position:
               
207-439
               

               
Cow position:
               
chr9:8612584-8612339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
43, 18
               

               
Conread position:
               
208-398
               

               
Cow position:
               
chr9:18140001-18140200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
20, 66
               

               
Conread position:
               
208-424
               

               
Cow position:
               
chr9:14974632-14974858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
20, 139
               

               
Conread position:
               
208-430
               

               
Cow position:
               
chr9:29841181-29840951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
208-430
               

               
Cow position:
               
chr9:48343895-48343668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
20, 30
               

               
Conread position:
               
208-432
               

               
Cow position:
               
chr9:8099528-8099757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
20, 112
               

               
Conread position:
               
208-432
               

               
Cow position:
               
chr9:20318784-20319015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
208-436
               

               
Cow position:
               
chr9:24726384-24726616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
20, 181
               

               
Conread position:
               
208-460
               

               
Cow position:
               
chr9:8937442-8937181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
20, 177
               

               
Conread position:
               
208-490
               

               
Cow position:
               
chr9:19542202-19541918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
105, 223
               

               
Conread position:
               
208-490
               

               
Cow position:
               
chr9:36999767-37000048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
20, 175
               

               
Conread position:
               
208-491
               

               
Cow position:
               
chr9:28773411-28773133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 227
               

               
Conread position:
               
208-497
               

               
Cow position:
               
chr9:3724768-3725058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
18, 39
               

               
Conread position:
               
208-531
               

               
Cow position:
               
chr9:9416112-9416423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 196
               

               
Conread position:
               
208-533
               

               
Cow position:
               
chr9:38344189-38343860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 247
               

               
Conread position:
               
208-534
               

               
Cow position:
               
chr9:37017178-37016868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
20, 175
               

               
Conread position:
               
208-537
               

               
Cow position:
               
chr9:6089391-6089054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
23, 196
               

               
Conread position:
               
208-539
               

               
Cow position:
               
chr9:15950861-15951196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
20, 159
               

               
Conread position:
               
208-540
               

               
Cow position:
               
chr9:8998649-8998312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 242
               

               
Conread position:
               
208-540
               

               
Cow position:
               
chr9:20900837-20901165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
138, 94
               

               
Conread position:
               
208-540
               

               
Cow position:
               
chr9:22696510-22696186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
21, 39
               

               
Conread position:
               
208-540
               

               
Cow position:
               
chr9:35375715-35375389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
18, 30
               

               
Conread position:
               
208-540
               

               
Cow position:
               
chr9:49982803-49983126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
20, 174
               

               
Conread position:
               
208-540
               

               
Cow position:
               
chr9:52407464-52407127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 235
               

               
Conread position:
               
208-540
               

               
Cow position:
               
chr9:60110526-60110213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
208-541
               

               
Cow position:
               
chr9:50295730-50296071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
20, 39
               

               
Conread position:
               
208-541
               

               
Cow position:
               
chr9:62357237-62357566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 229
               

               
Conread position:
               
208-542
               

               
Cow position:
               
chr9:5209880-5209541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
46, 242
               

               
Conread position:
               
208-542
               

               
Cow position:
               
chr9:6933778-6934112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
27, 87
               

               
Conread position:
               
208-542
               

               
Cow position:
               
chr9:9552381-9552051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 149
               

               
Conread position:
               
208-542
               

               
Cow position:
               
chr9:28983476-28983144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
16, 157
               

               
Conread position:
               
208-542
               

               
Cow position:
               
chr9:43871266-43870936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 84
               

               
Conread position:
               
208-542
               

               
Cow position:
               
chr9:44467055-44467378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
27, 215
               

               
Conread position:
               
208-547
               

               
Cow position:
               
chr9:28747228-28747565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 107
               

               
Conread position:
               
208-549
               

               
Cow position:
               
chr9:9595658-9595998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 223
               

               
Conread position:
               
209-434
               

               
Cow position:
               
chr9:38875282-38875514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
17, 38
               

               
Conread position:
               
209-552
               

               
Cow position:
               
chr9:18381153-18380816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 168
               

               
Conread position:
               
212-410
               

               
Cow position:
               
chr9:16182201-16182403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
212-538
               

               
Cow position:
               
chr9:32625284-32624972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
212-540
               

               
Cow position:
               
chr9:43207092-43207411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
112, 24
               

               
Conread position:
               
212-542
               

               
Cow position:
               
chr9:24887489-24887167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 61
               

               
Conread position:
               
213-430
               

               
Cow position:
               
chr9:26577572-26577788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
138, 180
               

               
Conread position:
               
213-540
               

               
Cow position:
               
chr9:9723595-9723913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
108, 37
               

               
Conread position:
               
213-540
               

               
Cow position:
               
chr9:9753108-9753428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
138, 33
               

               
Conread position:
               
213-547
               

               
Cow position:
               
chr9:3070133-3070456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
9, 108
               

               
Conread position:
               
215-537
               

               
Cow position:
               
chr9:38793305-38792981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 227
               

               
Conread position:
               
215-542
               

               
Cow position:
               
chr9:9443311-9443640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
96, 230
               

               
Conread position:
               
215-542
               

               
Cow position:
               
chr9:56773365-56773037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
99, 60
               

               
Conread position:
               
215-547
               

               
Cow position:
               
chr9:41789564-41789240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
215-552
               

               
Cow position:
               
chr9:50080760-50081089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
105, 222
               

               
Conread position:
               
216-537
               

               
Cow position:
               
chr9:63746090-63745780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
12, 99
               

               
Conread position:
               
217-350
               

               
Cow position:
               
chr9:36844117-36843982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
5, 31
               

               
Conread position:
               
217-442
               

               
Cow position:
               
chr9:17785175-17785405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
5, 211
               

               
Conread position:
               
217-483
               

               
Cow position:
               
chr9:53602698-53602447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
11, 104
               

               
Conread position:
               
217-538
               

               
Cow position:
               
chr9:56453618-56453303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 191
               

               
Conread position:
               
217-542
               

               
Cow position:
               
chr9:29825315-29824991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
5, 32
               

               
Conread position:
               
217-549
               

               
Cow position:
               
chr9:54610946-54611281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
27, 178
               

               
Conread position:
               
218-541
               

               
Cow position:
               
chr9:17929057-17928719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
10, 227
               

               
Conread position:
               
218-542
               

               
Cow position:
               
chr9:19637352-19637667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
14, 164
               

               
Conread position:
               
218-542
               

               
Cow position:
               
chr9:29684429-29684105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
10, 27
               

               
Conread position:
               
218-542
               

               
Cow position:
               
chr9:41283312-41282976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
10, 61
               

               
Conread position:
               
218-542
               

               
Cow position:
               
chr9:55287607-55287928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
10, 188
               

               
Conread position:
               
220-429
               

               
Cow position:
               
chr9:37069287-37069502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
220-429
               

               
Cow position:
               
chr9:52001288-52001072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
99, 38
               

               
Conread position:
               
220-540
               

               
Cow position:
               
chr9:54681783-54681472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 119
               

               
Conread position:
               
220-542
               

               
Cow position:
               
chr9:1520450-1520779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
101, 31
               

               
Conread position:
               
220-542
               

               
Cow position:
               
chr9:34689330-34689636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 72
               

               
Conread position:
               
220-542
               

               
Cow position:
               
chr9:61544928-61544615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
102, 27
               

               
Conread position:
               
221-449
               

               
Cow position:
               
chr9:3924897-3924674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
7, 178
               

               
Conread position:
               
221-449
               

               
Cow position:
               
chr9:27052052-27052290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
221-457
               

               
Cow position:
               
chr9:26065138-26065375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
7, 108
               

               
Conread position:
               
221-491
               

               
Cow position:
               
chr9:20738983-20738708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
10, 109
               

               
Conread position:
               
221-494
               

               
Cow position:
               
chr9:31587816-31588094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
5, 94
               

               
Conread position:
               
221-538
               

               
Cow position:
               
chr9:3932248-3931926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
5, 12
               

               
Conread position:
               
221-538
               

               
Cow position:
               
chr9:54924907-54924583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
7, 216
               

               
Conread position:
               
221-540
               

               
Cow position:
               
chr9:1751616-1751301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 153
               

               
Conread position:
               
221-540
               

               
Cow position:
               
chr9:12428222-12428537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
5, 49
               

               
Conread position:
               
221-540
               

               
Cow position:
               
chr9:22318619-22318312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 106
               

               
Conread position:
               
221-540
               

               
Cow position:
               
chr9:25964543-25964870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
7, 229
               

               
Conread position:
               
221-540
               

               
Cow position:
               
chr9:44710102-44709792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
7, 26
               

               
Conread position:
               
221-540
               

               
Cow position:
               
chr9:47472977-47472649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
5, 213
               

               
Conread position:
               
221-540
               

               
Cow position:
               
chr9:52689343-52689648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
7, 135
               

               
Conread position:
               
221-542
               

               
Cow position:
               
chr9:17310281-17310601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
23, 75
               

               
Conread position:
               
221-545
               

               
Cow position:
               
chr9:9624747-9625053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
5, 69
               

               
Conread position:
               
222-531
               

               
Cow position:
               
chr9:5052960-5053262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
92, 152
               

               
Conread position:
               
225-447
               

               
Cow position:
               
chr9:9957096-9956874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
100, 104
               

               
Conread position:
               
226-487
               

               
Cow position:
               
chr9:40604223-40603961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
88, 7
               

               
Conread position:
               
227-381
               

               
Cow position:
               
chr9:17568412-17568257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
92, 128
               

               
Conread position:
               
227-428
               

               
Cow position:
               
chr9:4128509-4128715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
227-453
               

               
Cow position:
               
chr9:41412037-41412272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
17, 91
               

               
Conread position:
               
227-535
               

               
Cow position:
               
chr9:44108556-44108866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
69, 82
               

               
Conread position:
               
227-540
               

               
Cow position:
               
chr9:15215407-15215724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
86, 216
               

               
Conread position:
               
227-542
               

               
Cow position:
               
chr9:14796505-14796809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
135, 19
               

               
Conread position:
               
227-552
               

               
Cow position:
               
chr9:10144198-10144524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 216
               

               
Conread position:
               
228-539
               

               
Cow position:
               
chr9:3782639-3782333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
14, 74
               

               
Conread position:
               
229-362
               

               
Cow position:
               
chr9:51557088-51557231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
229-438
               

               
Cow position:
               
chr9:34918993-34919204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
15, 86
               

               
Conread position:
               
229-532
               

               
Cow position:
               
chr9:36827398-36827106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 69
               

               
Conread position:
               
229-540
               

               
Cow position:
               
chr9:34287066-34286762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
230-431
               

               
Cow position:
               
chr9:23541146-23541343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
14, 72
               

               
Conread position:
               
230-452
               

               
Cow position:
               
chr9:8546589-8546366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 150
               

               
Conread position:
               
230-480
               

               
Cow position:
               
chr9:29108808-29108552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
90, 49
               

               
Conread position:
               
230-535
               

               
Cow position:
               
chr9:56011770-56011467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
13, 173
               

               
Conread position:
               
230-542
               

               
Cow position:
               
chr9:8563112-8562783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 28
               

               
Conread position:
               
232-424
               

               
Cow position:
               
chr9:25502269-25502471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
232-435
               

               
Cow position:
               
chr9:60459445-60459249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
232-540
               

               
Cow position:
               
chr9:20321846-20322130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
12, 86
               

               
Conread position:
               
233-444
               

               
Cow position:
               
chr9:24399419-24399629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
26, 12
               

               
Conread position:
               
233-484
               

               
Cow position:
               
chr9:35305852-35306099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
76, 86
               

               
Conread position:
               
233-488
               

               
Cow position:
               
chr9:12356124-12355868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
87, 165
               

               
Conread position:
               
233-541
               

               
Cow position:
               
chr9:6952358-6952063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
29, 20
               

               
Conread position:
               
233-542
               

               
Cow position:
               
chr9:5319897-5319583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 153
               

               
Conread position:
               
233-542
               

               
Cow position:
               
chr9:6192191-6192499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 145
               

               
Conread position:
               
233-542
               

               
Cow position:
               
chr9:10118395-10118698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 201
               

               
Conread position:
               
233-545
               

               
Cow position:
               
chr9:6880038-6879737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
86, 151
               

               
Conread position:
               
233-547
               

               
Cow position:
               
chr9:11068201-11068516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
86, 53
               

               
Conread position:
               
233-552
               

               
Cow position:
               
chr9:35904482-35904795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 91
               

               
Conread position:
               
234-349
               

               
Cow position:
               
chr9:36354015-36354130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
234-375
               

               
Cow position:
               
chr9:34400306-34400156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
234-375
               

               
Cow position:
               
chr9:49544794-49544937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
86, 39
               

               
Conread position:
               
234-376
               

               
Cow position:
               
chr9:20465446-20465596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
234-376
               

               
Cow position:
               
chr9:58131457-58131607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
234-399
               

               
Cow position:
               
chr9:31662736-31662561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
76, 12
               

               
Conread position:
               
234-406
               

               
Cow position:
               
chr9:35101134-35100958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
234-408
               

               
Cow position:
               
chr9:2398365-2398537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
158, 0
               

               
Conread position:
               
234-410
               

               
Cow position:
               
chr9:37141494-37141318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
86, 19
               

               
Conread position:
               
234-412
               

               
Cow position:
               
chr9:38184211-38184399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
80, 184
               

               
Conread position:
               
234-413
               

               
Cow position:
               
chr9:26310825-26310634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
234-421
               

               
Cow position:
               
chr9:53412982-53413172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
52, 140
               

               
Conread position:
               
234-426
               

               
Cow position:
               
chr9:9491060-9490863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
67, 61
               

               
Conread position:
               
234-428
               

               
Cow position:
               
chr9:61846883-61847082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
86, 79
               

               
Conread position:
               
234-429
               

               
Cow position:
               
chr9:20839881-20839684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
93, 85
               

               
Conread position:
               
234-430
               

               
Cow position:
               
chr9:58674008-58673805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
84, 57
               

               
Conread position:
               
234-432
               

               
Cow position:
               
chr9:20393861-20394055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
119, 52
               

               
Conread position:
               
234-432
               

               
Cow position:
               
chr9:41995981-41995774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
234-435
               

               
Cow position:
               
chr9:25933230-25933429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
113, 104
               

               
Conread position:
               
234-435
               

               
Cow position:
               
chr9:57951062-57951263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
86, 68
               

               
Conread position:
               
234-436
               

               
Cow position:
               
chr9:8997823-8997610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
234-436
               

               
Cow position:
               
chr9:17634564-17634773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
69, 159
               

               
Conread position:
               
234-436
               

               
Cow position:
               
chr9:19539364-19539150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
234-437
               

               
Cow position:
               
chr9:39971300-39971103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
85, 41
               

               
Conread position:
               
234-441
               

               
Cow position:
               
chr9:42585359-42585574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
79, 43
               

               
Conread position:
               
234-442
               

               
Cow position:
               
chr9:26828554-26828766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
79, 177
               

               
Conread position:
               
234-443
               

               
Cow position:
               
chr9:27076984-27077192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
183, 0
               

               
Conread position:
               
234-443
               

               
Cow position:
               
chr9:41653056-41652836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
234-445
               

               
Cow position:
               
chr9:36623185-36623393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
115, 82
               

               
Conread position:
               
234-448
               

               
Cow position:
               
chr9:3169253-3169470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
68, 148
               

               
Conread position:
               
234-449
               

               
Cow position:
               
chr9:5621763-5621988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
234-459
               

               
Cow position:
               
chr9:16218376-16218605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
67, 166
               

               
Conread position:
               
234-463
               

               
Cow position:
               
chr9:42998204-42998431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
80, 48
               

               
Conread position:
               
234-464
               

               
Cow position:
               
chr9:37528723-37528490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
74, 201
               

               
Conread position:
               
234-474
               

               
Cow position:
               
chr9:18002682-18002925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
85, 207
               

               
Conread position:
               
234-481
               

               
Cow position:
               
chr9:48809782-48809554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
234-483
               

               
Cow position:
               
chr9:847652-847898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
79, 138
               

               
Conread position:
               
234-488
               

               
Cow position:
               
chr9:55118345-55118097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
63, 39
               

               
Conread position:
               
234-489
               

               
Cow position:
               
chr9:43912196-43911934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
78, 119
               

               
Conread position:
               
234-491
               

               
Cow position:
               
chr9:21840342-21840084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
68, 163
               

               
Conread position:
               
234-491
               

               
Cow position:
               
chr9:50544366-50544618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
143, 89
               

               
Conread position:
               
234-495
               

               
Cow position:
               
chr9:26057181-26057436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
117, 41
               

               
Conread position:
               
234-528
               

               
Cow position:
               
chr9:9402918-9403198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
234-531
               

               
Cow position:
               
chr9:54528782-54528486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
85, 208
               

               
Conread position:
               
234-537
               

               
Cow position:
               
chr9:22638367-22638067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
80, 144
               

               
Conread position:
               
234-538
               

               
Cow position:
               
chr9:11201846-11201554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
234-538
               

               
Cow position:
               
chr9:16745944-16745637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
73, 39
               

               
Conread position:
               
234-538
               

               
Cow position:
               
chr9:21030583-21030273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
78, 205
               

               
Conread position:
               
234-538
               

               
Cow position:
               
chr9:34468326-34468613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
234-539
               

               
Cow position:
               
chr9:7634534-7634235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr9:648042-647740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
73, 29
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr9:824222-823923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
121, 70
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr9:5756736-5757025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
86, 123
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr9:7410049-7409726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr9:15805654-15805960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
85, 142
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr9:20681140-20681443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
93, 51
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr9:26404056-26403748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
76, 202
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr9:36410085-36410385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
85, 210
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr9:45756624-45756326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 34
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr9:52505036-52505343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
87, 216
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr9:53257793-53258091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
91, 171
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr9:57896858-57897147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr9:61022877-61022586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
52, 23
               

               
Conread position:
               
234-541
               

               
Cow position:
               
chr9:24997249-24997557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
87, 44
               

               
Conread position:
               
234-541
               

               
Cow position:
               
chr9:26086334-26086020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
85, 178
               

               
Conread position:
               
234-541
               

               
Cow position:
               
chr9:59013068-59013377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 166
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr9:1950186-1949878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
85, 43
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr9:5501118-5500814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
290, 87
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr9:20091305-20091007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 27
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr9:20989187-20989497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
86, 188
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr9:21888436-21888131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 207
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr9:29006827-29006518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 60
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr9:32371493-32371790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
35, 194
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr9:33598248-33597947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 204
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr9:34957785-34958095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 12
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr9:41513886-41513592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
123, 84
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr9:52578266-52578577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 152
               

               
Conread position:
               
234-542
               

               
Cow position:
               
chr9:64091955-64091641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 213
               

               
Conread position:
               
234-544
               

               
Cow position:
               
chr9:30402153-30402466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
86, 68
               

               
Conread position:
               
234-549
               

               
Cow position:
               
chr9:18252656-18252959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
85, 149
               

               
Conread position:
               
234-549
               

               
Cow position:
               
chr9:40542381-40542089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
119, 73
               

               
Conread position:
               
234-549
               

               
Cow position:
               
chr9:62400222-62399916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
25, 12
               

               
Conread position:
               
234-551
               

               
Cow position:
               
chr9:11299430-11299728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
234-551
               

               
Cow position:
               
chr9:49764923-49764612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
79, 124
               

               
Conread position:
               
234-552
               

               
Cow position:
               
chr9:13670904-13670584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
10, 158
               

               
Conread position:
               
234-552
               

               
Cow position:
               
chr9:23430875-23431197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 169
               

               
Conread position:
               
234-552
               

               
Cow position:
               
chr9:52484650-52484967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
86, 207
               

               
Conread position:
               
234-552
               

               
Cow position:
               
chr9:55084030-55084350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 263
               

               
Conread position:
               
235-449
               

               
Cow position:
               
chr9:41317701-41317922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
235-508
               

               
Cow position:
               
chr9:33093210-33092947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
85, 37
               

               
Conread position:
               
235-542
               

               
Cow position:
               
chr9:5268822-5268514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
85, 176
               

               
Conread position:
               
235-542
               

               
Cow position:
               
chr9:26278907-26279208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 194
               

               
Conread position:
               
236-391
               

               
Cow position:
               
chr9:18419429-18419274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
86, 55
               

               
Conread position:
               
236-422
               

               
Cow position:
               
chr9:3594259-3594456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
236-425
               

               
Cow position:
               
chr9:1984256-1984454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
61, 41
               

               
Conread position:
               
236-429
               

               
Cow position:
               
chr9:30664513-30664716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
236-432
               

               
Cow position:
               
chr9:38961173-38961369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
108, 176
               

               
Conread position:
               
236-432
               

               
Cow position:
               
chr9:43814705-43814509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
83, 37
               

               
Conread position:
               
236-435
               

               
Cow position:
               
chr9:58439516-58439719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
77, 110
               

               
Conread position:
               
236-439
               

               
Cow position:
               
chr9:5393316-5393105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
77, 131
               

               
Conread position:
               
236-444
               

               
Cow position:
               
chr9:18110600-18110814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
236-449
               

               
Cow position:
               
chr9:54437518-54437313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
236-453
               

               
Cow position:
               
chr9:18072852-18073069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
84, 161
               

               
Conread position:
               
236-456
               

               
Cow position:
               
chr9:10666759-10666985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
77, 117
               

               
Conread position:
               
236-473
               

               
Cow position:
               
chr9:60037921-60037680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 205
               

               
Conread position:
               
236-474
               

               
Cow position:
               
chr9:64516831-64517070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
85, 32
               

               
Conread position:
               
236-481
               

               
Cow position:
               
chr9:34666674-34666442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
236-487
               

               
Cow position:
               
chr9:36067171-36066922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
85, 199
               

               
Conread position:
               
236-492
               

               
Cow position:
               
chr9:5532218-5531956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
80, 208
               

               
Conread position:
               
236-497
               

               
Cow position:
               
chr9:61997330-61997592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
83, 180
               

               
Conread position:
               
236-503
               

               
Cow position:
               
chr9:40105742-40105467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
82, 203
               

               
Conread position:
               
236-508
               

               
Cow position:
               
chr9:47869272-47869004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
86, 130
               

               
Conread position:
               
236-512
               

               
Cow position:
               
chr9:9516505-9516775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
70, 103
               

               
Conread position:
               
236-523
               

               
Cow position:
               
chr9:25958679-25958397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
85, 37
               

               
Conread position:
               
236-527
               

               
Cow position:
               
chr9:1952004-1952294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 207
               

               
Conread position:
               
236-527
               

               
Cow position:
               
chr9:3411035-3410758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
44, 173
               

               
Conread position:
               
236-538
               

               
Cow position:
               
chr9:8951168-8950868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
65, 133
               

               
Conread position:
               
236-538
               

               
Cow position:
               
chr9:22443346-22443662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
69, 221
               

               
Conread position:
               
236-538
               

               
Cow position:
               
chr9:34093160-34093472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
75, 238
               

               
Conread position:
               
236-538
               

               
Cow position:
               
chr9:50076331-50076029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
74, 204
               

               
Conread position:
               
236-538
               

               
Cow position:
               
chr9:51566222-51566530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
118, 25
               

               
Conread position:
               
236-539
               

               
Cow position:
               
chr9:5226899-5227208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 214
               

               
Conread position:
               
236-539
               

               
Cow position:
               
chr9:63194873-63194571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
72, 165
               

               
Conread position:
               
236-540
               

               
Cow position:
               
chr9:5246114-5245816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
223, 84
               

               
Conread position:
               
236-540
               

               
Cow position:
               
chr9:20318313-20318609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
85, 140
               

               
Conread position:
               
236-540
               

               
Cow position:
               
chr9:20942346-20942653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
97, 18
               

               
Conread position:
               
236-540
               

               
Cow position:
               
chr9:22151822-22152122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 102
               

               
Conread position:
               
236-540
               

               
Cow position:
               
chr9:25546899-25546603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
65, 119
               

               
Conread position:
               
236-540
               

               
Cow position:
               
chr9:29184868-29185174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 202
               

               
Conread position:
               
236-540
               

               
Cow position:
               
chr9:35850164-35849867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
78, 172
               

               
Conread position:
               
236-540
               

               
Cow position:
               
chr9:41416616-41416296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
236-542
               

               
Cow position:
               
chr9:41680000-41679708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
236-542
               

               
Cow position:
               
chr9:44914830-44915136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 82
               

               
Conread position:
               
236-547
               

               
Cow position:
               
chr9:36445887-36445576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 41
               

               
Conread position:
               
236-549
               

               
Cow position:
               
chr9:61739182-61738876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
83, 65
               

               
Conread position:
               
236-552
               

               
Cow position:
               
chr9:5218914-5219221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 78
               

               
Conread position:
               
236-552
               

               
Cow position:
               
chr9:17871842-17872159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 213
               

               
Conread position:
               
236-552
               

               
Cow position:
               
chr9:18342988-18342684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
83, 137
               

               
Conread position:
               
236-552
               

               
Cow position:
               
chr9:30138391-30138071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
84, 184
               

               
Conread position:
               
236-552
               

               
Cow position:
               
chr9:34697030-34697349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
74, 206
               

               
Conread position:
               
236-552
               

               
Cow position:
               
chr9:51620701-51620396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 110
               

               
Conread position:
               
237-410
               

               
Cow position:
               
chr9:5161803-5161978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
76, 10
               

               
Conread position:
               
237-411
               

               
Cow position:
               
chr9:34568490-34568653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
14, 32
               

               
Conread position:
               
237-435
               

               
Cow position:
               
chr9:27697466-27697665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
83, 100
               

               
Conread position:
               
237-437
               

               
Cow position:
               
chr9:22440259-22440450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
237-440
               

               
Cow position:
               
chr9:52787273-52787482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
237-444
               

               
Cow position:
               
chr9:26555943-26556150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
90, 17
               

               
Conread position:
               
237-449
               

               
Cow position:
               
chr9:31640055-31640275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
86, 16
               

               
Conread position:
               
237-450
               

               
Cow position:
               
chr9:49983428-49983638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
82, 119
               

               
Conread position:
               
237-457
               

               
Cow position:
               
chr9:5029779-5029550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
237-465
               

               
Cow position:
               
chr9:41782159-41781931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
78, 192
               

               
Conread position:
               
237-469
               

               
Cow position:
               
chr9:30749321-30749556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
82, 203
               

               
Conread position:
               
237-469
               

               
Cow position:
               
chr9:49404017-49403793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
36, 68
               

               
Conread position:
               
237-491
               

               
Cow position:
               
chr9:9200461-9200712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
74, 163
               

               
Conread position:
               
237-527
               

               
Cow position:
               
chr9:3387954-3387665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
77, 25
               

               
Conread position:
               
237-529
               

               
Cow position:
               
chr9:42498093-42497795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 205
               

               
Conread position:
               
237-530
               

               
Cow position:
               
chr9:35533687-35533980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
83, 203
               

               
Conread position:
               
237-531
               

               
Cow position:
               
chr9:6225188-6225482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 203
               

               
Conread position:
               
237-533
               

               
Cow position:
               
chr9:5442256-5441959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 38
               

               
Conread position:
               
237-534
               

               
Cow position:
               
chr9:64050291-64050592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
39, 185
               

               
Conread position:
               
237-535
               

               
Cow position:
               
chr9:39152424-39152712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
237-538
               

               
Cow position:
               
chr9:2113740-2114042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
82, 172
               

               
Conread position:
               
237-538
               

               
Cow position:
               
chr9:10877602-10877930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
237-539
               

               
Cow position:
               
chr9:5141337-5141036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
77, 51
               

               
Conread position:
               
237-540
               

               
Cow position:
               
chr9:10011064-10010773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
113, 196
               

               
Conread position:
               
237-540
               

               
Cow position:
               
chr9:26434803-26435096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
114, 81
               

               
Conread position:
               
237-540
               

               
Cow position:
               
chr9:32732422-32732716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
83, 145
               

               
Conread position:
               
237-542
               

               
Cow position:
               
chr9:5594763-5594464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
82, 10
               

               
Conread position:
               
237-542
               

               
Cow position:
               
chr9:5836426-5836110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
104, 84
               

               
Conread position:
               
237-542
               

               
Cow position:
               
chr9:8288881-8288579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
79, 201
               

               
Conread position:
               
237-542
               

               
Cow position:
               
chr9:8534419-8534729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 170
               

               
Conread position:
               
237-542
               

               
Cow position:
               
chr9:9823256-9823545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
237-542
               

               
Cow position:
               
chr9:22114369-22114674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 214
               

               
Conread position:
               
237-542
               

               
Cow position:
               
chr9:47906025-47906321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
116, 71
               

               
Conread position:
               
237-542
               

               
Cow position:
               
chr9:49689200-49688924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
83, 118
               

               
Conread position:
               
237-549
               

               
Cow position:
               
chr9:50606690-50606991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
237-552
               

               
Cow position:
               
chr9:8636916-8636618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
165, 66
               

               
Conread position:
               
238-402
               

               
Cow position:
               
chr9:22616886-22616719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
81, 104
               

               
Conread position:
               
238-404
               

               
Cow position:
               
chr9:18008604-18008772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
238-408
               

               
Cow position:
               
chr9:10678466-10678292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
238-437
               

               
Cow position:
               
chr9:20406901-20406697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
82, 163
               

               
Conread position:
               
238-437
               

               
Cow position:
               
chr9:32812611-32812402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
238-443
               

               
Cow position:
               
chr9:22227823-22228030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
88, 78
               

               
Conread position:
               
238-443
               

               
Cow position:
               
chr9:52724953-52725162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
81, 140
               

               
Conread position:
               
238-444
               

               
Cow position:
               
chr9:26391031-26390821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
68, 206
               

               
Conread position:
               
238-445
               

               
Cow position:
               
chr9:33100877-33101084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
75, 142
               

               
Conread position:
               
238-447
               

               
Cow position:
               
chr9:10127405-10127625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
238-454
               

               
Cow position:
               
chr9:30189363-30189137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
81, 120
               

               
Conread position:
               
238-469
               

               
Cow position:
               
chr9:4928894-4928659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
75, 196
               

               
Conread position:
               
238-483
               

               
Cow position:
               
chr9:23028057-23027824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
238-487
               

               
Cow position:
               
chr9:34000353-34000604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
75, 176
               

               
Conread position:
               
238-497
               

               
Cow position:
               
chr9:58133759-58134014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
69, 143
               

               
Conread position:
               
238-534
               

               
Cow position:
               
chr9:44831792-44832085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 161
               

               
Conread position:
               
238-537
               

               
Cow position:
               
chr9:36490632-36490933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
238-540
               

               
Cow position:
               
chr9:3220386-3220099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
119, 66
               

               
Conread position:
               
238-540
               

               
Cow position:
               
chr9:23388415-23388709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 178
               

               
Conread position:
               
238-540
               

               
Cow position:
               
chr9:50976983-50977290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
82, 182
               

               
Conread position:
               
238-541
               

               
Cow position:
               
chr9:34901852-34902139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
57, 120
               

               
Conread position:
               
238-542
               

               
Cow position:
               
chr9:9405792-9406092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 57
               

               
Conread position:
               
238-542
               

               
Cow position:
               
chr9:19903315-19903043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
238-542
               

               
Cow position:
               
chr9:33940870-33940566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
83, 197
               

               
Conread position:
               
238-542
               

               
Cow position:
               
chr9:42445720-42446022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 12
               

               
Conread position:
               
238-542
               

               
Cow position:
               
chr9:46316525-46316820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 146
               

               
Conread position:
               
238-542
               

               
Cow position:
               
chr9:64155593-64155890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
81, 185
               

               
Conread position:
               
238-552
               

               
Cow position:
               
chr9:45285268-45285584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 111
               

               
Conread position:
               
239-402
               

               
Cow position:
               
chr9:1350183-1350352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
239-413
               

               
Cow position:
               
chr9:3379378-3379206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
81, 52
               

               
Conread position:
               
239-435
               

               
Cow position:
               
chr9:3575326-3575130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
71, 97
               

               
Conread position:
               
239-439
               

               
Cow position:
               
chr9:58204928-58204722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
74, 127
               

               
Conread position:
               
239-448
               

               
Cow position:
               
chr9:59924806-59924592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
239-489
               

               
Cow position:
               
chr9:20810799-20811051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
74, 164
               

               
Conread position:
               
239-494
               

               
Cow position:
               
chr9:1712223-1712467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
239-499
               

               
Cow position:
               
chr9:29034777-29035032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
94, 64
               

               
Conread position:
               
239-531
               

               
Cow position:
               
chr9:48118440-48118717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
112, 62
               

               
Conread position:
               
239-540
               

               
Cow position:
               
chr9:5327516-5327221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 97
               

               
Conread position:
               
239-540
               

               
Cow position:
               
chr9:20416247-20416543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
80, 138
               

               
Conread position:
               
239-540
               

               
Cow position:
               
chr9:63905342-63905644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
74, 198
               

               
Conread position:
               
239-552
               

               
Cow position:
               
chr9:4861654-4861335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
74, 204
               

               
Conread position:
               
239-552
               

               
Cow position:
               
chr9:34374667-34374973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
82, 53
               

               
Conread position:
               
239-552
               

               
Cow position:
               
chr9:38846087-38846382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
82, 120
               

               
Conread position:
               
240-432
               

               
Cow position:
               
chr9:5399980-5399792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
79, 133
               

               
Conread position:
               
240-442
               

               
Cow position:
               
chr9:44553008-44552796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
240-491
               

               
Cow position:
               
chr9:51311935-51311681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
37, 214
               

               
Conread position:
               
240-535
               

               
Cow position:
               
chr9:5433896-5433600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 209
               

               
Conread position:
               
240-538
               

               
Cow position:
               
chr9:44822041-44822359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
80, 167
               

               
Conread position:
               
240-539
               

               
Cow position:
               
chr9:214201-214497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
45, 166
               

               
Conread position:
               
240-540
               

               
Cow position:
               
chr9:32676947-32676640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
74, 207
               

               
Conread position:
               
240-542
               

               
Cow position:
               
chr9:54716361-54716641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
235, 21
               

               
Conread position:
               
241-538
               

               
Cow position:
               
chr9:32306976-32307266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
65, 187
               

               
Conread position:
               
241-542
               

               
Cow position:
               
chr9:59386517-59386808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
89, 136
               

               
Conread position:
               
241-549
               

               
Cow position:
               
chr9:51204985-51204681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
80, 170
               

               
Conread position:
               
241-551
               

               
Cow position:
               
chr9:55796019-55795709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
11, 130
               

               
Conread position:
               
241-552
               

               
Cow position:
               
chr9:58979660-58979352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
80, 6
               

               
Conread position:
               
242-528
               

               
Cow position:
               
chr9:28735738-28735463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
10, 130
               

               
Conread position:
               
242-552
               

               
Cow position:
               
chr9:55890068-55889765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
69, 147
               

               
Conread position:
               
244-436
               

               
Cow position:
               
chr9:45170912-45171107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
57, 105
               

               
Conread position:
               
245-542
               

               
Cow position:
               
chr9:11313252-11313549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
10, 25
               

               
Conread position:
               
245-551
               

               
Cow position:
               
chr9:62442538-62442240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
112, 17
               

               
Conread position:
               
245-552
               

               
Cow position:
               
chr9:25922079-25921774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
47, 23
               

               
Conread position:
               
246-540
               

               
Cow position:
               
chr9:4646073-4646362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
74, 193
               

               
Conread position:
               
246-552
               

               
Cow position:
               
chr9:62657047-62656754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
57, 68
               

               
Conread position:
               
247-368
               

               
Cow position:
               
chr9:41485747-41485868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
5, 22
               

               
Conread position:
               
247-452
               

               
Cow position:
               
chr9:44408294-44408084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
68, 123
               

               
Conread position:
               
247-475
               

               
Cow position:
               
chr9:1997386-1997165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
73, 24
               

               
Conread position:
               
247-494
               

               
Cow position:
               
chr9:33681938-33681683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
67, 49
               

               
Conread position:
               
247-540
               

               
Cow position:
               
chr9:7363281-7362991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
66, 144
               

               
Conread position:
               
247-540
               

               
Cow position:
               
chr9:31347208-31346913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
73, 110
               

               
Conread position:
               
247-540
               

               
Cow position:
               
chr9:55256295-55256589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 32
               

               
Conread position:
               
248-386
               

               
Cow position:
               
chr9:53109779-53109642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
248-401
               

               
Cow position:
               
chr9:23970685-23970830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
248-494
               

               
Cow position:
               
chr9:10092140-10092385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
108, 54
               

               
Conread position:
               
248-533
               

               
Cow position:
               
chr9:17410931-17411223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
118, 198
               

               
Conread position:
               
248-540
               

               
Cow position:
               
chr9:38614713-38614999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
108, 44
               

               
Conread position:
               
248-542
               

               
Cow position:
               
chr9:31814125-31814425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
72, 167
               

               
Conread position:
               
248-545
               

               
Cow position:
               
chr9:13169415-13169705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 95
               

               
Conread position:
               
248-549
               

               
Cow position:
               
chr9:48106866-48107162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
11, 148
               

               
Conread position:
               
250-551
               

               
Cow position:
               
chr9:50139532-50139235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
101, 115
               

               
Conread position:
               
251-522
               

               
Cow position:
               
chr9:20848186-20847910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 186
               

               
Conread position:
               
251-542
               

               
Cow position:
               
chr9:20579370-20579633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
172, 52
               

               
Conread position:
               
251-542
               

               
Cow position:
               
chr9:31078832-31079119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 97
               

               
Conread position:
               
251-549
               

               
Cow position:
               
chr9:18216850-18217145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
70, 139
               

               
Conread position:
               
252-552
               

               
Cow position:
               
chr9:33119633-33119937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 195
               

               
Conread position:
               
253-530
               

               
Cow position:
               
chr9:34742480-34742751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
66, 133
               

               
Conread position:
               
253-539
               

               
Cow position:
               
chr9:8338278-8337991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
60, 122
               

               
Conread position:
               
254-442
               

               
Cow position:
               
chr9:17806239-17806051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
66, 41
               

               
Conread position:
               
254-453
               

               
Cow position:
               
chr9:61493274-61493060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
55, 181
               

               
Conread position:
               
255-538
               

               
Cow position:
               
chr9:54206086-54206360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
65, 126
               

               
Conread position:
               
256-535
               

               
Cow position:
               
chr9:388770-389047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
62, 169
               

               
Conread position:
               
256-539
               

               
Cow position:
               
chr9:43757768-43757501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
244, 64
               

               
Conread position:
               
256-540
               

               
Cow position:
               
chr9:52131263-52130973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
58, 35
               

               
Conread position:
               
257-444
               

               
Cow position:
               
chr9:51005131-51004946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
70, 22
               

               
Conread position:
               
257-500
               

               
Cow position:
               
chr9:29092048-29091795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
63, 191
               

               
Conread position:
               
257-538
               

               
Cow position:
               
chr9:32815882-32815617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
56, 81
               

               
Conread position:
               
257-541
               

               
Cow position:
               
chr9:766906-767189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
47, 188
               

               
Conread position:
               
257-542
               

               
Cow position:
               
chr9:1729432-1729713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
63, 129
               

               
Conread position:
               
257-542
               

               
Cow position:
               
chr9:33823342-33823079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
63, 93
               

               
Conread position:
               
257-542
               

               
Cow position:
               
chr9:64106150-64105860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
58, 22
               

               
Conread position:
               
258-538
               

               
Cow position:
               
chr9:6840254-6839958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
259-498
               

               
Cow position:
               
chr9:62134378-62134623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
54, 41
               

               
Conread position:
               
259-529
               

               
Cow position:
               
chr9:44921164-44921419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
259-549
               

               
Cow position:
               
chr9:3186385-3186080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
7, 187
               

               
Conread position:
               
260-474
               

               
Cow position:
               
chr9:49279703-49279493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
156, 28
               

               
Conread position:
               
264-489
               

               
Cow position:
               
chr9:59507318-59507103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
67, 54
               

               
Conread position:
               
265-542
               

               
Cow position:
               
chr9:11319396-11319673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
42, 153
               

               
Conread position:
               
266-486
               

               
Cow position:
               
chr9:5238631-5238413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
55, 119
               

               
Conread position:
               
267-482
               

               
Cow position:
               
chr9:52619886-52619665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
46, 129
               

               
Conread position:
               
267-542
               

               
Cow position:
               
chr9:45141371-45141639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 78
               

               
Conread position:
               
268-542
               

               
Cow position:
               
chr9:4267747-4268021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 157
               

               
Conread position:
               
269-472
               

               
Cow position:
               
chr9:31292920-31292720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
28, 163
               

               
Conread position:
               
270-488
               

               
Cow position:
               
chr9:33038227-33038449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
51, 122
               

               
Conread position:
               
270-510
               

               
Cow position:
               
chr9:32711163-32710922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
20, 165
               

               
Conread position:
               
271-540
               

               
Cow position:
               
chr9:6339032-6338756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
42, 163
               

               
Conread position:
               
271-540
               

               
Cow position:
               
chr9:35128724-35128442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
272-474
               

               
Cow position:
               
chr9:50667653-50667450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
41, 176
               

               
Conread position:
               
273-494
               

               
Cow position:
               
chr9:27310538-27310753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
160, 15
               

               
Conread position:
               
274-542
               

               
Cow position:
               
chr9:30477557-30477814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
46, 133
               

               
Conread position:
               
274-549
               

               
Cow position:
               
chr9:53762928-53762648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
47, 125
               

               
Conread position:
               
275-539
               

               
Cow position:
               
chr9:1938352-1938094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
46, 79
               

               
Conread position:
               
276-540
               

               
Cow position:
               
chr9:26440571-26440849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
277-458
               

               
Cow position:
               
chr9:32829792-32829969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
164, 43
               

               
Conread position:
               
277-533
               

               
Cow position:
               
chr9:30162387-30162126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
47, 160
               

               
Conread position:
               
277-542
               

               
Cow position:
               
chr9:28354742-28354478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
37, 120
               

               
Conread position:
               
279-435
               

               
Cow position:
               
chr9:43048404-43048567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
279-534
               

               
Cow position:
               
chr9:27279540-27279278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
42, 161
               

               
Conread position:
               
279-538
               

               
Cow position:
               
chr9:1973164-1972913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
42, 160
               

               
Conread position:
               
280-540
               

               
Cow position:
               
chr9:30652489-30652746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
47, 9
               

               
Conread position:
               
281-542
               

               
Cow position:
               
chr9:17799850-17799586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
40, 23
               

               
Conread position:
               
281-549
               

               
Cow position:
               
chr9:44833745-44834009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
33, 151
               

               
Conread position:
               
285-503
               

               
Cow position:
               
chr9:30195429-30195214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
36, 101
               

               
Conread position:
               
286-540
               

               
Cow position:
               
chr9:11123277-11123520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
34, 17
               

               
Conread position:
               
290-540
               

               
Cow position:
               
chr9:52637945-52638204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
29, 165
               

               
Conread position:
               
291-535
               

               
Cow position:
               
chr9:32816924-32817174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
29, 152
               

               
Conread position:
               
291-542
               

               
Cow position:
               
chr9:49417197-49416948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
23, 147
               

               
Conread position:
               
292-506
               

               
Cow position:
               
chr9:8920207-8919987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
293-540
               

               
Cow position:
               
chr9:6397569-6397821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
21, 149
               

               
Conread position:
               
298-540
               

               
Cow position:
               
chr9:41518418-41518663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
17, 132
               

               
Conread position:
               
300-516
               

               
Cow position:
               
chr9:32019133-32019349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
14, 149
               

               
Conread position:
               
303-540
               

               
Cow position:
               
chr9:30124114-30123892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
303-541
               

               
Cow position:
               
chr9:60027393-60027159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
18, 61
               

               
Conread position:
               
305-540
               

               
Cow position:
               
chr9:55321829-55321600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
52, 47
               

               
Conread position:
               
305-541
               

               
Cow position:
               
chr9:61303195-61302962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
305-542
               

               
Cow position:
               
chr9:12910207-12910440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
27, 131
               

               
Conread position:
               
305-542
               

               
Cow position:
               
chr9:19067969-19067744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
305-542
               

               
Cow position:
               
chr9:19493271-19493505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
96, 130
               

               
Conread position:
               
305-542
               

               
Cow position:
               
chr9:41728447-41728221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
305-542
               

               
Cow position:
               
chr9:48628219-48627989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
305-552
               

               
Cow position:
               
chr9:4340978-4341208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
306-552
               

               
Cow position:
               
chr9:24873019-24872786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
238, 22
               

               
Conread position:
               
309-539
               

               
Cow position:
               
chr9:34106910-34106681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
68, 115
               

               
Conread position:
               
310-542
               

               
Cow position:
               
chr9:21080745-21080524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
66, 17
               

               
Conread position:
               
312-540
               

               
Cow position:
               
chr9:9654127-9654344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
312-541
               

               
Cow position:
               
chr9:62668437-62668210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
39, 73
               

               
Conread position:
               
312-542
               

               
Cow position:
               
chr9:19555559-19555337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
31, 103
               

               
Conread position:
               
312-542
               

               
Cow position:
               
chr9:58614674-58614455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
29, 120
               

               
Conread position:
               
314-552
               

               
Cow position:
               
chr9:3738039-3738273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
320-542
               

               
Cow position:
               
chr9:54493300-54493096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
321-547
               

               
Cow position:
               
chr9:43875546-43875764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
204, 32
               

               
Conread position:
               
322-450
               

               
Cow position:
               
chr9:62151276-62151151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
322-486
               

               
Cow position:
               
chr9:31638466-31638626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
34, 113
               

               
Conread position:
               
322-487
               

               
Cow position:
               
chr9:4323983-4324141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
322-538
               

               
Cow position:
               
chr9:9815590-9815378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
34, 91
               

               
Conread position:
               
322-540
               

               
Cow position:
               
chr9:8901049-8901264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
35, 16
               

               
Conread position:
               
322-542
               

               
Cow position:
               
chr9:50543249-50543467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
201, 25
               

               
Conread position:
               
322-552
               

               
Cow position:
               
chr9:11168905-11168681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
35, 113
               

               
Conread position:
               
322-552
               

               
Cow position:
               
chr9:40215418-40215198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
35, 108
               

               
Conread position:
               
323-538
               

               
Cow position:
               
chr9:41853616-41853397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
33, 133
               

               
Conread position:
               
323-542
               

               
Cow position:
               
chr9:17518315-17518528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
28, 93
               

               
Conread position:
               
323-549
               

               
Cow position:
               
chr9:25557139-25556926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
324-511
               

               
Cow position:
               
chr9:40543149-40543333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
32, 44
               

               
Conread position:
               
324-538
               

               
Cow position:
               
chr9:41957977-41957771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
70, 50
               

               
Conread position:
               
324-540
               

               
Cow position:
               
chr9:27029531-27029742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
62, 29
               

               
Conread position:
               
324-540
               

               
Cow position:
               
chr9:47500034-47500249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
32, 63
               

               
Conread position:
               
325-437
               

               
Cow position:
               
chr9:8525008-8524895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
325-540
               

               
Cow position:
               
chr9:16121340-16121131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
73, 30
               

               
Conread position:
               
325-542
               

               
Cow position:
               
chr9:60394879-60395087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
326-538
               

               
Cow position:
               
chr9:26477387-26477181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
30, 68
               

               
Conread position:
               
326-542
               

               
Cow position:
               
chr9:39011306-39011508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
327-542
               

               
Cow position:
               
chr9:50202739-50202534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
328-542
               

               
Cow position:
               
chr9:51720733-51720936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
29, 107
               

               
Conread position:
               
328-543
               

               
Cow position:
               
chr9:5263669-5263458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
206, 43
               

               
Conread position:
               
329-540
               

               
Cow position:
               
chr9:12281137-12280934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
22, 56
               

               
Conread position:
               
330-540
               

               
Cow position:
               
chr9:1755975-1756182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
26, 98
               

               
Conread position:
               
332-551
               

               
Cow position:
               
chr9:49292981-49293193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
212, 92
               

               
Conread position:
               
335-548
               

               
Cow position:
               
chr9:3378906-3378708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
209, 37
               

               
Conread position:
               
336-490
               

               
Cow position:
               
chr9:42509275-42509129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
336-541
               

               
Cow position:
               
chr9:11303917-11304113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
22, 70
               

               
Conread position:
               
337-488
               

               
Cow position:
               
chr9:9086357-9086206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
52, 103
               

               
Conread position:
               
342-542
               

               
Cow position:
               
chr9:33114500-33114307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
344-541
               

               
Cow position:
               
chr9:52267604-52267793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
344-552
               

               
Cow position:
               
chr9:33697179-33696983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
350-542
               

               
Cow position:
               
chr9:34284094-34283914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
112, 61
               

               
Conread position:
               
352-542
               

               
Cow position:
               
chr9:10819688-10819867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
353-523
               

               
Cow position:
               
chr9:6596091-6596256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
356-545
               

               
Cow position:
               
chr9:41486100-41486285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
357-542
               

               
Cow position:
               
chr9:1867589-1867412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
360-539
               

               
Cow position:
               
chr9:43013860-43013686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
360-542
               

               
Cow position:
               
chr9:40005612-40005435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
361-538
               

               
Cow position:
               
chr9:53326615-53326787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
173, 78
               

               
Conread position:
               
373-550
               

               
Cow position:
               
chr9:53750834-53751004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
98, 25
               

               
Conread position:
               
376-542
               

               
Cow position:
               
chr9:33584562-33584724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
379-542
               

               
Cow position:
               
chr9:53109370-53109212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
380-540
               

               
Cow position:
               
chr9:41785337-41785173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
382-542
               

               
Cow position:
               
chr9:23955869-23956019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
387-542
               

               
Cow position:
               
chr9:28754929-28754778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
388-542
               

               
Cow position:
               
chr9:32981963-32982114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
112, 37
               

               
Conread position:
               
397-552
               

               
Cow position:
               
chr9:29194923-29195073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
401-552
               

               
Cow position:
               
chr9:17840579-17840727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
449-552
               

               
Cow position:
               
chr9:55354664-55354562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
6, 0
               
Show alignments to all cow chromosomes.