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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8028B23.5
        

               
Conread position:
               
370-717
               

               
Cow position:
               
chr25:23407267-23406936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
165, 9
               

               
Conread position:
               
373-700
               

               
Cow position:
               
chr25:23829534-23829235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
374-684
               

               
Cow position:
               
chr25:20394781-20395068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
374-710
               

               
Cow position:
               
chr25:13333002-13333318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
270, 28
               

               
Conread position:
               
374-710
               

               
Cow position:
               
chr25:24136874-24136542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
125, 35
               

               
Conread position:
               
374-712
               

               
Cow position:
               
chr25:18448411-18448736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 39
               

               
Conread position:
               
374-715
               

               
Cow position:
               
chr25:5341217-5341552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 54
               

               
Conread position:
               
374-717
               

               
Cow position:
               
chr25:1837815-1838139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
323, 28
               

               
Conread position:
               
376-704
               

               
Cow position:
               
chr25:26881784-26882109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 70
               

               
Conread position:
               
381-545
               

               
Cow position:
               
chr25:33572705-33572544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
59, 46
               

               
Conread position:
               
394-699
               

               
Cow position:
               
chr25:12176611-12176311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
401-711
               

               
Cow position:
               
chr25:5537057-5536748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
297, 148
               

               
Conread position:
               
406-697
               

               
Cow position:
               
chr25:26225439-26225160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
407-672
               

               
Cow position:
               
chr25:29336089-29336351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
133, 16
               

               
Conread position:
               
407-674
               

               
Cow position:
               
chr25:24669030-24668762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
32, 138
               

               
Conread position:
               
407-695
               

               
Cow position:
               
chr25:36633388-36633103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
5, 84
               

               
Conread position:
               
407-702
               

               
Cow position:
               
chr25:27504576-27504292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
5, 60
               

               
Conread position:
               
407-707
               

               
Cow position:
               
chr25:17598894-17598598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
45, 16
               

               
Conread position:
               
407-710
               

               
Cow position:
               
chr25:10012458-10012154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
5, 262
               

               
Conread position:
               
408-712
               

               
Cow position:
               
chr25:3145444-3145741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
290, 141
               

               
Conread position:
               
409-710
               

               
Cow position:
               
chr25:22910246-22909950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
64, 29
               

               
Conread position:
               
411-588
               

               
Cow position:
               
chr25:33366562-33366741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
21, 12
               

               
Conread position:
               
411-606
               

               
Cow position:
               
chr25:2624246-2624436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
411-687
               

               
Cow position:
               
chr25:6226654-6226916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
411-694
               

               
Cow position:
               
chr25:29308837-29309112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
27, 13
               

               
Conread position:
               
411-696
               

               
Cow position:
               
chr25:38569992-38569718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
411-702
               

               
Cow position:
               
chr25:11585115-11585408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 12
               

               
Conread position:
               
411-704
               

               
Cow position:
               
chr25:41107363-41107644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
411-710
               

               
Cow position:
               
chr25:11830293-11830006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 12
               

               
Conread position:
               
411-712
               

               
Cow position:
               
chr25:30279606-30279308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 12
               

               
Conread position:
               
411-712
               

               
Cow position:
               
chr25:35608124-35607825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
131, 12
               

               
Conread position:
               
413-648
               

               
Cow position:
               
chr25:40429638-40429404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
8, 116
               

               
Conread position:
               
414-702
               

               
Cow position:
               
chr25:394960-395242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
11, 115
               

               
Conread position:
               
415-710
               

               
Cow position:
               
chr25:12235148-12234864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
96, 46
               

               
Conread position:
               
415-710
               

               
Cow position:
               
chr25:14569972-14570265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
123, 38
               

               
Conread position:
               
416-548
               

               
Cow position:
               
chr25:13941127-13940994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
416-686
               

               
Cow position:
               
chr25:11970223-11969959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
416-699
               

               
Cow position:
               
chr25:11666275-11666535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
417-573
               

               
Cow position:
               
chr25:14755810-14755658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
417-673
               

               
Cow position:
               
chr25:4857885-4857631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
417-699
               

               
Cow position:
               
chr25:13067375-13067095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
417-699
               

               
Cow position:
               
chr25:28272922-28273202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
417-699
               

               
Cow position:
               
chr25:33589796-33589515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
255, 132
               

               
Conread position:
               
417-699
               

               
Cow position:
               
chr25:34121481-34121201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
417-699
               

               
Cow position:
               
chr25:34163949-34163675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
417-699
               

               
Cow position:
               
chr25:35554281-35554570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
95, 141
               

               
Conread position:
               
417-708
               

               
Cow position:
               
chr25:21121192-21121481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
417-712
               

               
Cow position:
               
chr25:34672983-34672692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
164, 36
               

               
Conread position:
               
417-717
               

               
Cow position:
               
chr25:13955777-13955478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 132
               

               
Conread position:
               
418-696
               

               
Cow position:
               
chr25:17585325-17585048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
163, 101
               

               
Conread position:
               
418-696
               

               
Cow position:
               
chr25:26682173-26682449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
168, 131
               

               
Conread position:
               
418-699
               

               
Cow position:
               
chr25:13960675-13960949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
418-699
               

               
Cow position:
               
chr25:19339421-19339698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
418-699
               

               
Cow position:
               
chr25:26923457-26923736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
418-704
               

               
Cow position:
               
chr25:26849440-26849155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
225, 126
               

               
Conread position:
               
418-711
               

               
Cow position:
               
chr25:29525254-29524962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
280, 131
               

               
Conread position:
               
418-717
               

               
Cow position:
               
chr25:36392355-36392058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
280, 67
               

               
Conread position:
               
419-704
               

               
Cow position:
               
chr25:17659166-17659454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
171, 130
               

               
Conread position:
               
420-547
               

               
Cow position:
               
chr25:15452909-15452782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
420-567
               

               
Cow position:
               
chr25:4401772-4401627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
420-571
               

               
Cow position:
               
chr25:15429064-15428915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
420-621
               

               
Cow position:
               
chr25:29559630-29559829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
420-641
               

               
Cow position:
               
chr25:33901767-33901548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
420-647
               

               
Cow position:
               
chr25:5007-5232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
420-667
               

               
Cow position:
               
chr25:29802129-29801884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
420-672
               

               
Cow position:
               
chr25:5461785-5462035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
420-672
               

               
Cow position:
               
chr25:10158357-10158607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
420-672
               

               
Cow position:
               
chr25:26791644-26791889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
160, 80
               

               
Conread position:
               
420-696
               

               
Cow position:
               
chr25:8655905-8656179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
420-699
               

               
Cow position:
               
chr25:3140916-3141193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
420-699
               

               
Cow position:
               
chr25:3689025-3689302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
420-699
               

               
Cow position:
               
chr25:9414738-9415015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
420-699
               

               
Cow position:
               
chr25:11056488-11056759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
39, 109
               

               
Conread position:
               
420-699
               

               
Cow position:
               
chr25:11097318-11097595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
420-699
               

               
Cow position:
               
chr25:12208101-12208378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
420-699
               

               
Cow position:
               
chr25:13429514-13429250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
121, 30
               

               
Conread position:
               
420-699
               

               
Cow position:
               
chr25:14555283-14555560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
420-699
               

               
Cow position:
               
chr25:15412636-15412913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
420-699
               

               
Cow position:
               
chr25:15618311-15618588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
420-699
               

               
Cow position:
               
chr25:17426868-17427145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
420-699
               

               
Cow position:
               
chr25:19138957-19138680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
420-699
               

               
Cow position:
               
chr25:20771723-20771446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
420-699
               

               
Cow position:
               
chr25:23601328-23601051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
420-699
               

               
Cow position:
               
chr25:25873377-25873100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
420-699
               

               
Cow position:
               
chr25:26756083-26756360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
420-699
               

               
Cow position:
               
chr25:27143322-27143044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
95, 130
               

               
Conread position:
               
420-699
               

               
Cow position:
               
chr25:29383717-29383440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
420-699
               

               
Cow position:
               
chr25:35589685-35589962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
420-700
               

               
Cow position:
               
chr25:18090532-18090810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
420-702
               

               
Cow position:
               
chr25:11044253-11044526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
420-702
               

               
Cow position:
               
chr25:17993908-17993627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
278, 129
               

               
Conread position:
               
420-704
               

               
Cow position:
               
chr25:12943415-12943133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
420-704
               

               
Cow position:
               
chr25:25510505-25510784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
420-706
               

               
Cow position:
               
chr25:7069136-7069421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
278, 129
               

               
Conread position:
               
420-706
               

               
Cow position:
               
chr25:7608928-7609213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
278, 129
               

               
Conread position:
               
420-707
               

               
Cow position:
               
chr25:18240763-18241055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
250, 131
               

               
Conread position:
               
420-711
               

               
Cow position:
               
chr25:3167569-3167279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
278, 129
               

               
Conread position:
               
420-711
               

               
Cow position:
               
chr25:8235630-8235340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
278, 129
               

               
Conread position:
               
420-711
               

               
Cow position:
               
chr25:10896117-10895827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
278, 129
               

               
Conread position:
               
420-711
               

               
Cow position:
               
chr25:12157493-12157783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
278, 129
               

               
Conread position:
               
420-711
               

               
Cow position:
               
chr25:12753301-12753017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
278, 71
               

               
Conread position:
               
420-711
               

               
Cow position:
               
chr25:17808167-17807877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
278, 129
               

               
Conread position:
               
420-711
               

               
Cow position:
               
chr25:22198197-22198487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
278, 129
               

               
Conread position:
               
420-711
               

               
Cow position:
               
chr25:26319356-26319646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
278, 129
               

               
Conread position:
               
420-711
               

               
Cow position:
               
chr25:26939982-26940272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
278, 128
               

               
Conread position:
               
420-711
               

               
Cow position:
               
chr25:27076673-27076963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
278, 129
               

               
Conread position:
               
420-711
               

               
Cow position:
               
chr25:27146047-27146342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
170, 129
               

               
Conread position:
               
420-711
               

               
Cow position:
               
chr25:32609804-32609514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
278, 129
               

               
Conread position:
               
420-711
               

               
Cow position:
               
chr25:34257598-34257888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
278, 129
               

               
Conread position:
               
420-717
               

               
Cow position:
               
chr25:6740431-6740717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
278, 33
               

               
Conread position:
               
423-608
               

               
Cow position:
               
chr25:12496286-12496103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
423-664
               

               
Cow position:
               
chr25:25756481-25756716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
423-699
               

               
Cow position:
               
chr25:36351357-36351631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
239, 126
               

               
Conread position:
               
424-675
               

               
Cow position:
               
chr25:26621701-26621456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
424-701
               

               
Cow position:
               
chr25:18082417-18082147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
198, 37
               

               
Conread position:
               
425-686
               

               
Cow position:
               
chr25:24663379-24663124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
80, 21
               

               
Conread position:
               
429-568
               

               
Cow position:
               
chr25:6988218-6988081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
429-577
               

               
Cow position:
               
chr25:18023383-18023526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
138, 72
               

               
Conread position:
               
429-629
               

               
Cow position:
               
chr25:32278410-32278212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
429-699
               

               
Cow position:
               
chr25:16967469-16967201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
191, 112
               

               
Conread position:
               
429-699
               

               
Cow position:
               
chr25:17682155-17681891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
46, 10
               

               
Conread position:
               
429-705
               

               
Cow position:
               
chr25:6021589-6021859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
429-708
               

               
Cow position:
               
chr25:40388834-40388565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
241, 38
               

               
Conread position:
               
429-712
               

               
Cow position:
               
chr25:5539041-5539319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 120
               

               
Conread position:
               
429-712
               

               
Cow position:
               
chr25:21191109-21191387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
429-712
               

               
Cow position:
               
chr25:21209327-21209048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
429-718
               

               
Cow position:
               
chr25:36779115-36779399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
267, 118
               

               
Conread position:
               
430-699
               

               
Cow position:
               
chr25:30621405-30621138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
134, 58
               

               
Conread position:
               
431-564
               

               
Cow position:
               
chr25:18487097-18487228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
431-666
               

               
Cow position:
               
chr25:26187910-26187678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
431-699
               

               
Cow position:
               
chr25:6464407-6464151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
431-699
               

               
Cow position:
               
chr25:13325223-13325479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 119
               

               
Conread position:
               
431-720
               

               
Cow position:
               
chr25:38972455-38972740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
432-548
               

               
Cow position:
               
chr25:2595611-2595727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
432-571
               

               
Cow position:
               
chr25:23325381-23325244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
432-586
               

               
Cow position:
               
chr25:16316416-16316566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
432-589
               

               
Cow position:
               
chr25:18310394-18310550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
120, 92
               

               
Conread position:
               
432-598
               

               
Cow position:
               
chr25:37254572-37254731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
432-624
               

               
Cow position:
               
chr25:21041443-21041633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
83, 67
               

               
Conread position:
               
432-630
               

               
Cow position:
               
chr25:35612711-35612513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
117, 160
               

               
Conread position:
               
432-633
               

               
Cow position:
               
chr25:11315250-11315449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
32, 98
               

               
Conread position:
               
432-633
               

               
Cow position:
               
chr25:17191508-17191310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
432-635
               

               
Cow position:
               
chr25:30852396-30852595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
432-637
               

               
Cow position:
               
chr25:34000307-34000505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
432-650
               

               
Cow position:
               
chr25:14255184-14255403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
177, 70
               

               
Conread position:
               
432-662
               

               
Cow position:
               
chr25:13569545-13569317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
185, 124
               

               
Conread position:
               
432-663
               

               
Cow position:
               
chr25:21069114-21068875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
63, 128
               

               
Conread position:
               
432-664
               

               
Cow position:
               
chr25:4860825-4860593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 120
               

               
Conread position:
               
432-666
               

               
Cow position:
               
chr25:11294415-11294649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
432-672
               

               
Cow position:
               
chr25:34156296-34156533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
207, 117
               

               
Conread position:
               
432-675
               

               
Cow position:
               
chr25:13553535-13553771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
18, 22
               

               
Conread position:
               
432-686
               

               
Cow position:
               
chr25:30412318-30412062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
19, 74
               

               
Conread position:
               
432-691
               

               
Cow position:
               
chr25:17119563-17119314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
432-695
               

               
Cow position:
               
chr25:1735688-1735433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
432-696
               

               
Cow position:
               
chr25:10407796-10407534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
432-697
               

               
Cow position:
               
chr25:4488358-4488610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
143, 89
               

               
Conread position:
               
432-699
               

               
Cow position:
               
chr25:5792180-5791920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
432-699
               

               
Cow position:
               
chr25:12824407-12824138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
109, 230
               

               
Conread position:
               
432-699
               

               
Cow position:
               
chr25:15005828-15006080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
432-699
               

               
Cow position:
               
chr25:16957535-16957275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
22, 16
               

               
Conread position:
               
432-699
               

               
Cow position:
               
chr25:18294693-18294434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 119
               

               
Conread position:
               
432-699
               

               
Cow position:
               
chr25:20248929-20249177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
432-699
               

               
Cow position:
               
chr25:21562327-21562054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
13, 58
               

               
Conread position:
               
432-699
               

               
Cow position:
               
chr25:24727163-24726900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
432-699
               

               
Cow position:
               
chr25:26618075-26618340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
432-701
               

               
Cow position:
               
chr25:12533472-12533206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
190, 92
               

               
Conread position:
               
432-701
               

               
Cow position:
               
chr25:26869782-26870051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
158, 195
               

               
Conread position:
               
432-702
               

               
Cow position:
               
chr25:8576322-8576579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
432-704
               

               
Cow position:
               
chr25:27868433-27868690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
432-708
               

               
Cow position:
               
chr25:10011097-10010826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
432-708
               

               
Cow position:
               
chr25:12171087-12171353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
266, 96
               

               
Conread position:
               
432-708
               

               
Cow position:
               
chr25:14274063-14274337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
266, 117
               

               
Conread position:
               
432-708
               

               
Cow position:
               
chr25:36871481-36871753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
432-710
               

               
Cow position:
               
chr25:41097571-41097286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
100, 92
               

               
Conread position:
               
432-711
               

               
Cow position:
               
chr25:11956449-11956725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 117
               

               
Conread position:
               
432-711
               

               
Cow position:
               
chr25:23410287-23410558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
432-712
               

               
Cow position:
               
chr25:1096199-1096475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 117
               

               
Conread position:
               
432-712
               

               
Cow position:
               
chr25:7641826-7641554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
432-712
               

               
Cow position:
               
chr25:8482691-8482411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 92
               

               
Conread position:
               
432-712
               

               
Cow position:
               
chr25:12117352-12117092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
20, 86
               

               
Conread position:
               
432-712
               

               
Cow position:
               
chr25:21193321-21193044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
432-712
               

               
Cow position:
               
chr25:22314823-22315099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
432-712
               

               
Cow position:
               
chr25:27593924-27594198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 18
               

               
Conread position:
               
432-712
               

               
Cow position:
               
chr25:32191291-32191567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
99, 112
               

               
Conread position:
               
432-712
               

               
Cow position:
               
chr25:36746823-36746546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
432-713
               

               
Cow position:
               
chr25:20069349-20069621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
432-715
               

               
Cow position:
               
chr25:4548100-4547817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 85
               

               
Conread position:
               
432-715
               

               
Cow position:
               
chr25:6891905-6891626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 218
               

               
Conread position:
               
432-717
               

               
Cow position:
               
chr25:2110707-2110978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
432-717
               

               
Cow position:
               
chr25:2135986-2136255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
246, 69
               

               
Conread position:
               
432-717
               

               
Cow position:
               
chr25:16738319-16738037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
202, 92
               

               
Conread position:
               
432-717
               

               
Cow position:
               
chr25:22530911-22531186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
432-717
               

               
Cow position:
               
chr25:25754373-25754095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
433-547
               

               
Cow position:
               
chr25:9595939-9596050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
433-561
               

               
Cow position:
               
chr25:41121632-41121758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
433-564
               

               
Cow position:
               
chr25:19570773-19570645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
433-582
               

               
Cow position:
               
chr25:14118378-14118525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
433-621
               

               
Cow position:
               
chr25:20652349-20652163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
433-621
               

               
Cow position:
               
chr25:21017849-21017665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
433-636
               

               
Cow position:
               
chr25:9349634-9349433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
433-641
               

               
Cow position:
               
chr25:16802066-16802273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
48, 119
               

               
Conread position:
               
433-666
               

               
Cow position:
               
chr25:6118217-6117989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
433-686
               

               
Cow position:
               
chr25:27231962-27232210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
433-688
               

               
Cow position:
               
chr25:16136779-16137030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
153, 116
               

               
Conread position:
               
433-689
               

               
Cow position:
               
chr25:14960077-14959823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
239, 116
               

               
Conread position:
               
433-696
               

               
Cow position:
               
chr25:23399605-23399342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
125, 38
               

               
Conread position:
               
433-699
               

               
Cow position:
               
chr25:7717568-7717830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
433-699
               

               
Cow position:
               
chr25:16067886-16068148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
433-699
               

               
Cow position:
               
chr25:17994669-17994406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 116
               

               
Conread position:
               
433-699
               

               
Cow position:
               
chr25:18323730-18323466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
433-699
               

               
Cow position:
               
chr25:19586711-19586447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
433-699
               

               
Cow position:
               
chr25:19912918-19912655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
433-699
               

               
Cow position:
               
chr25:20496163-20496418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
433-699
               

               
Cow position:
               
chr25:20650890-20651154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
148, 41
               

               
Conread position:
               
433-699
               

               
Cow position:
               
chr25:22709178-22709423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
179, 71
               

               
Conread position:
               
433-699
               

               
Cow position:
               
chr25:23945891-23945629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
142, 117
               

               
Conread position:
               
433-699
               

               
Cow position:
               
chr25:24654546-24654285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
433-699
               

               
Cow position:
               
chr25:26087139-26087402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
433-699
               

               
Cow position:
               
chr25:34013130-34012867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
433-702
               

               
Cow position:
               
chr25:26282653-26282913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
433-704
               

               
Cow position:
               
chr25:8572247-8571978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
433-704
               

               
Cow position:
               
chr25:13787574-13787842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
155, 116
               

               
Conread position:
               
433-704
               

               
Cow position:
               
chr25:13840493-13840225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 23
               

               
Conread position:
               
433-704
               

               
Cow position:
               
chr25:16560967-16560704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
433-704
               

               
Cow position:
               
chr25:18885857-18885595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
433-704
               

               
Cow position:
               
chr25:26911133-26910870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
433-704
               

               
Cow position:
               
chr25:28274820-28274561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
433-704
               

               
Cow position:
               
chr25:28863498-28863767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
433-704
               

               
Cow position:
               
chr25:34343275-34343006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
17, 22
               

               
Conread position:
               
433-704
               

               
Cow position:
               
chr25:34659481-34659213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
433-704
               

               
Cow position:
               
chr25:35446569-35446825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
433-707
               

               
Cow position:
               
chr25:36765672-36765407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
265, 116
               

               
Conread position:
               
433-710
               

               
Cow position:
               
chr25:16409109-16408832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
211, 116
               

               
Conread position:
               
433-711
               

               
Cow position:
               
chr25:11437179-11436911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
433-711
               

               
Cow position:
               
chr25:35649461-35649738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
265, 116
               

               
Conread position:
               
433-712
               

               
Cow position:
               
chr25:10504713-10504441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
72, 55
               

               
Conread position:
               
433-712
               

               
Cow position:
               
chr25:41356174-41355896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
265, 116
               

               
Conread position:
               
433-717
               

               
Cow position:
               
chr25:8231259-8230980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
265, 116
               

               
Conread position:
               
433-717
               

               
Cow position:
               
chr25:14954402-14954120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
265, 116
               

               
Conread position:
               
434-548
               

               
Cow position:
               
chr25:18012982-18013096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
13, 20
               

               
Conread position:
               
434-555
               

               
Cow position:
               
chr25:35048038-35047917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
434-566
               

               
Cow position:
               
chr25:40906652-40906522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
434-578
               

               
Cow position:
               
chr25:14284144-14284002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
434-588
               

               
Cow position:
               
chr25:9045155-9045307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
434-598
               

               
Cow position:
               
chr25:32824006-32823845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
434-612
               

               
Cow position:
               
chr25:30267992-30268168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
434-613
               

               
Cow position:
               
chr25:36124324-36124499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
434-613
               

               
Cow position:
               
chr25:36962368-36962188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
23, 148
               

               
Conread position:
               
434-622
               

               
Cow position:
               
chr25:13122566-13122750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
434-630
               

               
Cow position:
               
chr25:14720109-14720301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
434-630
               

               
Cow position:
               
chr25:17992517-17992323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
434-637
               

               
Cow position:
               
chr25:32606891-32606690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
13, 63
               

               
Conread position:
               
434-645
               

               
Cow position:
               
chr25:20007745-20007980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
434-658
               

               
Cow position:
               
chr25:26896664-26896888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
216, 93
               

               
Conread position:
               
434-658
               

               
Cow position:
               
chr25:33839012-33839233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
434-667
               

               
Cow position:
               
chr25:7259172-7259403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
146, 115
               

               
Conread position:
               
434-672
               

               
Cow position:
               
chr25:25480008-25479769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
114, 142
               

               
Conread position:
               
434-673
               

               
Cow position:
               
chr25:5604615-5604387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
229, 94
               

               
Conread position:
               
434-674
               

               
Cow position:
               
chr25:23013837-23014081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
107, 56
               

               
Conread position:
               
434-674
               

               
Cow position:
               
chr25:36869013-36869250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
217, 109
               

               
Conread position:
               
434-684
               

               
Cow position:
               
chr25:22730274-22730503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
434-687
               

               
Cow position:
               
chr25:5611437-5611690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
97, 90
               

               
Conread position:
               
434-689
               

               
Cow position:
               
chr25:33687274-33687020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
250, 0
               

               
Conread position:
               
434-691
               

               
Cow position:
               
chr25:16691129-16691395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
106, 14
               

               
Conread position:
               
434-693
               

               
Cow position:
               
chr25:21950750-21951003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
434-696
               

               
Cow position:
               
chr25:38439785-38440044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
70, 199
               

               
Conread position:
               
434-698
               

               
Cow position:
               
chr25:12064013-12063752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
434-698
               

               
Cow position:
               
chr25:15247269-15247529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
77, 81
               

               
Conread position:
               
434-698
               

               
Cow position:
               
chr25:32899182-32898918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
67, 128
               

               
Conread position:
               
434-699
               

               
Cow position:
               
chr25:4049659-4049914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
434-699
               

               
Cow position:
               
chr25:13720916-13720656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 0
               

               
Conread position:
               
434-699
               

               
Cow position:
               
chr25:20403095-20402833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
434-699
               

               
Cow position:
               
chr25:25827085-25827349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 142
               

               
Conread position:
               
434-699
               

               
Cow position:
               
chr25:29198954-29199213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
144, 110
               

               
Conread position:
               
434-699
               

               
Cow position:
               
chr25:30319825-30319566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
434-699
               

               
Cow position:
               
chr25:32848700-32848439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
21, 52
               

               
Conread position:
               
434-699
               

               
Cow position:
               
chr25:35585896-35585637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
434-704
               

               
Cow position:
               
chr25:10643682-10643418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
434-709
               

               
Cow position:
               
chr25:35077037-35076789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
434-711
               

               
Cow position:
               
chr25:787897-788160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
434-711
               

               
Cow position:
               
chr25:14791380-14791649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
434-711
               

               
Cow position:
               
chr25:16430398-16430137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
434-712
               

               
Cow position:
               
chr25:8120401-8120677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
255, 116
               

               
Conread position:
               
434-712
               

               
Cow position:
               
chr25:9641968-9642252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 235
               

               
Conread position:
               
434-712
               

               
Cow position:
               
chr25:15319554-15319816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
434-712
               

               
Cow position:
               
chr25:17658239-17658510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 115
               

               
Conread position:
               
434-712
               

               
Cow position:
               
chr25:20460766-20461023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
146, 48
               

               
Conread position:
               
434-712
               

               
Cow position:
               
chr25:22412855-22412581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
141, 113
               

               
Conread position:
               
434-712
               

               
Cow position:
               
chr25:24572696-24572965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 114
               

               
Conread position:
               
434-712
               

               
Cow position:
               
chr25:36761740-36762003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
272, 67
               

               
Conread position:
               
434-714
               

               
Cow position:
               
chr25:5514633-5514909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
263, 94
               

               
Conread position:
               
434-717
               

               
Cow position:
               
chr25:4522193-4521933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
434-717
               

               
Cow position:
               
chr25:5271211-5271495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
263, 115
               

               
Conread position:
               
434-717
               

               
Cow position:
               
chr25:7216446-7216732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 121
               

               
Conread position:
               
434-717
               

               
Cow position:
               
chr25:12204093-12204371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 117
               

               
Conread position:
               
434-717
               

               
Cow position:
               
chr25:14225172-14224901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
88, 116
               

               
Conread position:
               
434-717
               

               
Cow position:
               
chr25:16866862-16867131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
434-717
               

               
Cow position:
               
chr25:18564116-18564391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
9, 131
               

               
Conread position:
               
434-717
               

               
Cow position:
               
chr25:20060404-20060125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 94
               

               
Conread position:
               
434-717
               

               
Cow position:
               
chr25:23389648-23389378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
264, 94
               

               
Conread position:
               
434-717
               

               
Cow position:
               
chr25:26654532-26654811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 49
               

               
Conread position:
               
434-718
               

               
Cow position:
               
chr25:41393040-41392757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
78, 116
               

               
Conread position:
               
434-721
               

               
Cow position:
               
chr25:2414461-2414724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
434-731
               

               
Cow position:
               
chr25:10367062-10366782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
435-589
               

               
Cow position:
               
chr25:27510633-27510480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
118, 84
               

               
Conread position:
               
435-631
               

               
Cow position:
               
chr25:20790068-20789883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
435-644
               

               
Cow position:
               
chr25:11054555-11054752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
435-667
               

               
Cow position:
               
chr25:18271886-18272117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
145, 114
               

               
Conread position:
               
435-691
               

               
Cow position:
               
chr25:10580463-10580202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
435-696
               

               
Cow position:
               
chr25:26353137-26352882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
147, 115
               

               
Conread position:
               
435-699
               

               
Cow position:
               
chr25:5756316-5756582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
118, 219
               

               
Conread position:
               
435-699
               

               
Cow position:
               
chr25:36554630-36554887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
435-700
               

               
Cow position:
               
chr25:35339960-35340216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
435-710
               

               
Cow position:
               
chr25:12239510-12239254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
435-710
               

               
Cow position:
               
chr25:18721471-18721220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
107, 17
               

               
Conread position:
               
435-712
               

               
Cow position:
               
chr25:11662190-11661920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
435-712
               

               
Cow position:
               
chr25:37469403-37469670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
436-695
               

               
Cow position:
               
chr25:18490701-18490948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
436-699
               

               
Cow position:
               
chr25:10748874-10748620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
436-699
               

               
Cow position:
               
chr25:24227714-24227450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
103, 165
               

               
Conread position:
               
436-710
               

               
Cow position:
               
chr25:25866561-25866818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
133, 87
               

               
Conread position:
               
436-712
               

               
Cow position:
               
chr25:6470590-6470321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
262, 114
               

               
Conread position:
               
437-578
               

               
Cow position:
               
chr25:11961183-11961313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
437-690
               

               
Cow position:
               
chr25:4161347-4161598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
228, 112
               

               
Conread position:
               
437-712
               

               
Cow position:
               
chr25:3992417-3992690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
439-702
               

               
Cow position:
               
chr25:33112382-33112111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
113, 27
               

               
Conread position:
               
441-682
               

               
Cow position:
               
chr25:16445201-16444962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
138, 101
               

               
Conread position:
               
441-687
               

               
Cow position:
               
chr25:30162436-30162192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
139, 48
               

               
Conread position:
               
443-717
               

               
Cow position:
               
chr25:16064529-16064791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
8, 79
               

               
Conread position:
               
444-687
               

               
Cow position:
               
chr25:11836132-11836370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
218, 97
               

               
Conread position:
               
445-668
               

               
Cow position:
               
chr25:3969033-3969251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
449-568
               

               
Cow position:
               
chr25:16044946-16044828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
13, 96
               

               
Conread position:
               
449-704
               

               
Cow position:
               
chr25:13446282-13446028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
5, 101
               

               
Conread position:
               
450-699
               

               
Cow position:
               
chr25:6894134-6894369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
451-717
               

               
Cow position:
               
chr25:16922151-16921889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
452-548
               

               
Cow position:
               
chr25:13566196-13566292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
80
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
452-635
               

               
Cow position:
               
chr25:24636492-24636308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
452-672
               

               
Cow position:
               
chr25:6421409-6421195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
452-694
               

               
Cow position:
               
chr25:11051025-11051256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
452-699
               

               
Cow position:
               
chr25:23739609-23739376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
50, 90
               

               
Conread position:
               
452-699
               

               
Cow position:
               
chr25:28327452-28327209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
58, 76
               

               
Conread position:
               
452-699
               

               
Cow position:
               
chr25:40321651-40321406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
44, 66
               

               
Conread position:
               
452-701
               

               
Cow position:
               
chr25:8397413-8397652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
127, 16
               

               
Conread position:
               
452-707
               

               
Cow position:
               
chr25:26238511-26238762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 99
               

               
Conread position:
               
452-711
               

               
Cow position:
               
chr25:36119844-36120096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
452-712
               

               
Cow position:
               
chr25:4680882-4681133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
108, 55
               

               
Conread position:
               
452-712
               

               
Cow position:
               
chr25:35347545-35347804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 43
               

               
Conread position:
               
452-717
               

               
Cow position:
               
chr25:31733090-31732832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
453-583
               

               
Cow position:
               
chr25:18658548-18658675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
453-621
               

               
Cow position:
               
chr25:33077021-33076851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
453-645
               

               
Cow position:
               
chr25:16688607-16688417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
453-648
               

               
Cow position:
               
chr25:13412072-13412266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
115, 88
               

               
Conread position:
               
453-685
               

               
Cow position:
               
chr25:21303277-21303504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
453-687
               

               
Cow position:
               
chr25:22277620-22277389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
453-690
               

               
Cow position:
               
chr25:4188413-4188175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
89, 68
               

               
Conread position:
               
453-696
               

               
Cow position:
               
chr25:14618100-14617863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
70, 90
               

               
Conread position:
               
453-696
               

               
Cow position:
               
chr25:32514199-32513958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
453-698
               

               
Cow position:
               
chr25:13132410-13132649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
186, 45
               

               
Conread position:
               
453-699
               

               
Cow position:
               
chr25:2511065-2510821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
453-699
               

               
Cow position:
               
chr25:5847152-5846920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
211, 90
               

               
Conread position:
               
453-699
               

               
Cow position:
               
chr25:9625453-9625696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
128, 33
               

               
Conread position:
               
453-699
               

               
Cow position:
               
chr25:12318196-12317952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
453-699
               

               
Cow position:
               
chr25:13967021-13966777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
453-699
               

               
Cow position:
               
chr25:17659873-17660117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
58, 49
               

               
Conread position:
               
453-699
               

               
Cow position:
               
chr25:27621725-27621969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
453-699
               

               
Cow position:
               
chr25:33959616-33959377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
453-699
               

               
Cow position:
               
chr25:35617781-35618021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
453-699
               

               
Cow position:
               
chr25:36127256-36127012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
453-702
               

               
Cow position:
               
chr25:37687514-37687282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
453-704
               

               
Cow position:
               
chr25:39386188-39385939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
453-708
               

               
Cow position:
               
chr25:14103940-14104179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
244, 75
               

               
Conread position:
               
453-710
               

               
Cow position:
               
chr25:30816469-30816727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 25
               

               
Conread position:
               
453-711
               

               
Cow position:
               
chr25:17037099-17037356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
245, 96
               

               
Conread position:
               
453-711
               

               
Cow position:
               
chr25:23334655-23334912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
245, 96
               

               
Conread position:
               
453-711
               

               
Cow position:
               
chr25:35602075-35602332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
245, 96
               

               
Conread position:
               
453-711
               

               
Cow position:
               
chr25:38910179-38910436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
245, 96
               

               
Conread position:
               
453-712
               

               
Cow position:
               
chr25:7800779-7801036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
453-712
               

               
Cow position:
               
chr25:11269555-11269302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
245, 96
               

               
Conread position:
               
453-712
               

               
Cow position:
               
chr25:21024559-21024317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
245, 53
               

               
Conread position:
               
453-712
               

               
Cow position:
               
chr25:40957343-40957092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
453-714
               

               
Cow position:
               
chr25:12840089-12840335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
249, 41
               

               
Conread position:
               
453-717
               

               
Cow position:
               
chr25:26111925-26112169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
246, 97
               

               
Conread position:
               
455-629
               

               
Cow position:
               
chr25:17553618-17553446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
171, 94
               

               
Conread position:
               
455-649
               

               
Cow position:
               
chr25:2453948-2453755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
157, 73
               

               
Conread position:
               
455-690
               

               
Cow position:
               
chr25:15668167-15667933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
212, 87
               

               
Conread position:
               
455-699
               

               
Cow position:
               
chr25:4897742-4897981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
125, 94
               

               
Conread position:
               
455-700
               

               
Cow position:
               
chr25:9078464-9078702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
456-547
               

               
Cow position:
               
chr25:7032616-7032707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
92
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
456-581
               

               
Cow position:
               
chr25:23913080-23912960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
456-608
               

               
Cow position:
               
chr25:10013739-10013589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
456-649
               

               
Cow position:
               
chr25:18000881-18000679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
85, 120
               

               
Conread position:
               
456-691
               

               
Cow position:
               
chr25:14823099-14822872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
456-699
               

               
Cow position:
               
chr25:380335-380095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
456-699
               

               
Cow position:
               
chr25:19531031-19531272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
456-699
               

               
Cow position:
               
chr25:19924170-19924410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
456-699
               

               
Cow position:
               
chr25:26757077-26757324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
89, 163
               

               
Conread position:
               
456-699
               

               
Cow position:
               
chr25:27017346-27017105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
456-699
               

               
Cow position:
               
chr25:33025434-33025201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
456-699
               

               
Cow position:
               
chr25:41387863-41387634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
456-701
               

               
Cow position:
               
chr25:14874227-14874459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
456-701
               

               
Cow position:
               
chr25:27424095-27423856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
206, 68
               

               
Conread position:
               
456-704
               

               
Cow position:
               
chr25:10698800-10699046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
456-704
               

               
Cow position:
               
chr25:35567240-35566994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
456-705
               

               
Cow position:
               
chr25:6606712-6606470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
119, 93
               

               
Conread position:
               
456-707
               

               
Cow position:
               
chr25:26407846-26408092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
242, 71
               

               
Conread position:
               
456-710
               

               
Cow position:
               
chr25:6683414-6683168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
456-710
               

               
Cow position:
               
chr25:18155242-18155494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
132, 93
               

               
Conread position:
               
456-711
               

               
Cow position:
               
chr25:18044854-18044600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
242, 93
               

               
Conread position:
               
456-711
               

               
Cow position:
               
chr25:33990018-33989764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
242, 93
               

               
Conread position:
               
456-712
               

               
Cow position:
               
chr25:6967125-6966874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
168, 93
               

               
Conread position:
               
456-712
               

               
Cow position:
               
chr25:12359852-12360107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
242, 96
               

               
Conread position:
               
456-713
               

               
Cow position:
               
chr25:9842651-9842901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 72
               

               
Conread position:
               
456-714
               

               
Cow position:
               
chr25:33256016-33256267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 64
               

               
Conread position:
               
456-717
               

               
Cow position:
               
chr25:10137752-10137998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 73
               

               
Conread position:
               
456-717
               

               
Cow position:
               
chr25:23351042-23351300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 93
               

               
Conread position:
               
457-547
               

               
Cow position:
               
chr25:18935362-18935272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
91
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
457-587
               

               
Cow position:
               
chr25:39313242-39313113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
457-698
               

               
Cow position:
               
chr25:8348303-8348071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
125, 53
               

               
Conread position:
               
457-698
               

               
Cow position:
               
chr25:41385459-41385220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
74, 93
               

               
Conread position:
               
457-699
               

               
Cow position:
               
chr25:10657390-10657140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
93, 205
               

               
Conread position:
               
457-699
               

               
Cow position:
               
chr25:30817225-30817460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
237, 25
               

               
Conread position:
               
457-699
               

               
Cow position:
               
chr25:40657946-40658183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
57, 90
               

               
Conread position:
               
457-717
               

               
Cow position:
               
chr25:9396102-9396353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
239, 83
               

               
Conread position:
               
458-674
               

               
Cow position:
               
chr25:7732611-7732825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
458-689
               

               
Cow position:
               
chr25:12750515-12750286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
459-702
               

               
Cow position:
               
chr25:9055854-9056075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
459-717
               

               
Cow position:
               
chr25:18293420-18293651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
460-654
               

               
Cow position:
               
chr25:31064821-31065003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
460-681
               

               
Cow position:
               
chr25:33664244-33664027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
461-618
               

               
Cow position:
               
chr25:12807853-12807697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
120, 88
               

               
Conread position:
               
462-626
               

               
Cow position:
               
chr25:598984-599149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
100, 49
               

               
Conread position:
               
462-693
               

               
Cow position:
               
chr25:35655214-35655439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
462-696
               

               
Cow position:
               
chr25:20434207-20434433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
462-699
               

               
Cow position:
               
chr25:41351550-41351319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
189, 33
               

               
Conread position:
               
463-701
               

               
Cow position:
               
chr25:18181767-18182002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
463-711
               

               
Cow position:
               
chr25:18236720-18236473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
235, 86
               

               
Conread position:
               
464-699
               

               
Cow position:
               
chr25:31586694-31586925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
231, 79
               

               
Conread position:
               
464-717
               

               
Cow position:
               
chr25:15273344-15273590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
465-687
               

               
Cow position:
               
chr25:8485877-8485661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
465-690
               

               
Cow position:
               
chr25:12661101-12661319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
468-712
               

               
Cow position:
               
chr25:6948397-6948157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
7, 83
               

               
Conread position:
               
468-712
               

               
Cow position:
               
chr25:20625271-20625031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
216, 81
               

               
Conread position:
               
468-717
               

               
Cow position:
               
chr25:17354037-17354278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
91, 184
               

               
Conread position:
               
469-701
               

               
Cow position:
               
chr25:3199751-3199521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
91, 26
               

               
Conread position:
               
471-699
               

               
Cow position:
               
chr25:21245945-21245724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
471-711
               

               
Cow position:
               
chr25:13062518-13062757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
227, 78
               

               
Conread position:
               
473-613
               

               
Cow position:
               
chr25:20133748-20133615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
5, 39
               

               
Conread position:
               
473-712
               

               
Cow position:
               
chr25:27531605-27531376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
474-640
               

               
Cow position:
               
chr25:9634587-9634747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
474-699
               

               
Cow position:
               
chr25:23738790-23738567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
475-711
               

               
Cow position:
               
chr25:36037125-36036885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 49
               

               
Conread position:
               
475-712
               

               
Cow position:
               
chr25:9957369-9957143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
231, 165
               

               
Conread position:
               
475-712
               

               
Cow position:
               
chr25:26523644-26523861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
476-631
               

               
Cow position:
               
chr25:33735288-33735441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
476-698
               

               
Cow position:
               
chr25:2126135-2126354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
178, 74
               

               
Conread position:
               
477-699
               

               
Cow position:
               
chr25:7445820-7446035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
477-717
               

               
Cow position:
               
chr25:6803231-6803457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
220, 72
               

               
Conread position:
               
480-699
               

               
Cow position:
               
chr25:10637836-10637619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
480-699
               

               
Cow position:
               
chr25:12541123-12541335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
481-715
               

               
Cow position:
               
chr25:32459343-32459570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
482-709
               

               
Cow position:
               
chr25:15694655-15694875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 65
               

               
Conread position:
               
482-711
               

               
Cow position:
               
chr25:17418855-17419083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
216, 67
               

               
Conread position:
               
483-699
               

               
Cow position:
               
chr25:12359223-12359433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
136, 66
               

               
Conread position:
               
483-704
               

               
Cow position:
               
chr25:16039166-16038949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
484-672
               

               
Cow position:
               
chr25:10212170-10212356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
484-699
               

               
Cow position:
               
chr25:6886294-6886092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
484-711
               

               
Cow position:
               
chr25:17538739-17538513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
214, 65
               

               
Conread position:
               
484-711
               

               
Cow position:
               
chr25:29352251-29352024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
12, 66
               

               
Conread position:
               
485-699
               

               
Cow position:
               
chr25:9743900-9744113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
84, 43
               

               
Conread position:
               
486-712
               

               
Cow position:
               
chr25:9847462-9847685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
197, 31
               

               
Conread position:
               
486-717
               

               
Cow position:
               
chr25:6424905-6424682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 35
               

               
Conread position:
               
487-663
               

               
Cow position:
               
chr25:7687895-7687721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
487-712
               

               
Cow position:
               
chr25:17975690-17975471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
489-699
               

               
Cow position:
               
chr25:18073231-18073439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
489-704
               

               
Cow position:
               
chr25:16231445-16231235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
490-706
               

               
Cow position:
               
chr25:12097522-12097734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 49
               

               
Conread position:
               
491-666
               

               
Cow position:
               
chr25:22346331-22346497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
491-702
               

               
Cow position:
               
chr25:15714560-15714771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
11, 61
               

               
Conread position:
               
491-704
               

               
Cow position:
               
chr25:27821091-27821303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
491-712
               

               
Cow position:
               
chr25:25051703-25051485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
492-694
               

               
Cow position:
               
chr25:9023327-9023521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
492-699
               

               
Cow position:
               
chr25:7762929-7763134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
493-709
               

               
Cow position:
               
chr25:15391645-15391432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
91, 56
               

               
Conread position:
               
495-704
               

               
Cow position:
               
chr25:13708702-13708901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
495-704
               

               
Cow position:
               
chr25:23053242-23053447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
495-712
               

               
Cow position:
               
chr25:15368361-15368576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
174, 0
               

               
Conread position:
               
498-697
               

               
Cow position:
               
chr25:12817061-12817257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
498-712
               

               
Cow position:
               
chr25:18968960-18969173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
200, 51
               

               
Conread position:
               
498-714
               

               
Cow position:
               
chr25:21961318-21961107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
200, 52
               

               
Conread position:
               
500-648
               

               
Cow position:
               
chr25:27521294-27521159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
501-696
               

               
Cow position:
               
chr25:29561655-29561843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
501-711
               

               
Cow position:
               
chr25:16977494-16977700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
197, 48
               

               
Conread position:
               
501-712
               

               
Cow position:
               
chr25:8347200-8347405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
161, 49
               

               
Conread position:
               
501-717
               

               
Cow position:
               
chr25:10366060-10365849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
205, 13
               

               
Conread position:
               
504-711
               

               
Cow position:
               
chr25:25961656-25961860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
165, 0
               

               
Conread position:
               
506-702
               

               
Cow position:
               
chr25:2194647-2194834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
511-717
               

               
Cow position:
               
chr25:6474399-6474195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
513-699
               

               
Cow position:
               
chr25:6775097-6774914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
513-711
               

               
Cow position:
               
chr25:16319423-16319235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
513-712
               

               
Cow position:
               
chr25:25948692-25948502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
185, 43
               

               
Conread position:
               
513-717
               

               
Cow position:
               
chr25:21895184-21894985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
32, 60
               

               
Conread position:
               
514-702
               

               
Cow position:
               
chr25:18130777-18130962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
24, 14
               

               
Conread position:
               
514-711
               

               
Cow position:
               
chr25:14352002-14352198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
184, 35
               

               
Conread position:
               
514-711
               

               
Cow position:
               
chr25:15274826-15275026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
514-712
               

               
Cow position:
               
chr25:448641-448448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
184, 26
               

               
Conread position:
               
516-687
               

               
Cow position:
               
chr25:14117815-14117980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
517-697
               

               
Cow position:
               
chr25:33457415-33457589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
517-712
               

               
Cow position:
               
chr25:10746600-10746796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
31, 138
               

               
Conread position:
               
519-647
               

               
Cow position:
               
chr25:22549905-22549778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
91, 31
               

               
Conread position:
               
520-699
               

               
Cow position:
               
chr25:11139350-11139531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
33, 53
               

               
Conread position:
               
524-711
               

               
Cow position:
               
chr25:9931788-9931974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
174, 25
               

               
Conread position:
               
525-717
               

               
Cow position:
               
chr25:28188237-28188045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
13, 60
               

               
Conread position:
               
526-699
               

               
Cow position:
               
chr25:20348573-20348742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
6, 25
               

               
Conread position:
               
528-658
               

               
Cow position:
               
chr25:23920135-23920006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
74, 28
               

               
Conread position:
               
528-699
               

               
Cow position:
               
chr25:5834535-5834367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
528-712
               

               
Cow position:
               
chr25:10330676-10330503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
528-712
               

               
Cow position:
               
chr25:20023681-20023493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
528-712
               

               
Cow position:
               
chr25:25783356-25783537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
170, 20
               

               
Conread position:
               
530-713
               

               
Cow position:
               
chr25:19366689-19366521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
530-717
               

               
Cow position:
               
chr25:38850770-38850584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
135, 20
               

               
Conread position:
               
531-712
               

               
Cow position:
               
chr25:12195604-12195431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
532-712
               

               
Cow position:
               
chr25:15412054-15411869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
534-717
               

               
Cow position:
               
chr25:12261170-12260989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
163, 16
               

               
Conread position:
               
535-702
               

               
Cow position:
               
chr25:36081600-36081763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
536-712
               

               
Cow position:
               
chr25:40151125-40151294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
537-717
               

               
Cow position:
               
chr25:6003268-6003086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
537-718
               

               
Cow position:
               
chr25:14512843-14513013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
540-672
               

               
Cow position:
               
chr25:8961191-8961319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
540-698
               

               
Cow position:
               
chr25:7440583-7440733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
103, 111
               

               
Conread position:
               
540-699
               

               
Cow position:
               
chr25:17566314-17566468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
11, 111
               

               
Conread position:
               
540-699
               

               
Cow position:
               
chr25:17712262-17712414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
540-699
               

               
Cow position:
               
chr25:35344766-35344921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
540-712
               

               
Cow position:
               
chr25:9990361-9990196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
540-712
               

               
Cow position:
               
chr25:35625443-35625280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
540-714
               

               
Cow position:
               
chr25:11131313-11131479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
540-731
               

               
Cow position:
               
chr25:14191568-14191375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
158, 185
               

               
Conread position:
               
541-677
               

               
Cow position:
               
chr25:11823796-11823662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
134, 40
               

               
Conread position:
               
541-711
               

               
Cow position:
               
chr25:18935146-18934977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
40, 113
               

               
Conread position:
               
541-717
               

               
Cow position:
               
chr25:20785852-20785684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
542-717
               

               
Cow position:
               
chr25:9596356-9596531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
156, 118
               

               
Conread position:
               
543-699
               

               
Cow position:
               
chr25:13642585-13642432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
543-717
               

               
Cow position:
               
chr25:21266737-21266911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
67, 111
               

               
Conread position:
               
544-702
               

               
Cow position:
               
chr25:14266770-14266617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
123, 35
               

               
Conread position:
               
545-712
               

               
Cow position:
               
chr25:22203957-22203788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
547-717
               

               
Cow position:
               
chr25:26700775-26700938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
550-700
               

               
Cow position:
               
chr25:18075407-18075556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
550-704
               

               
Cow position:
               
chr25:9961440-9961285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
550-712
               

               
Cow position:
               
chr25:12778796-12778632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
25, 108
               

               
Conread position:
               
550-712
               

               
Cow position:
               
chr25:26058323-26058485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
75, 87
               

               
Conread position:
               
550-712
               

               
Cow position:
               
chr25:38957716-38957871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
110, 31
               

               
Conread position:
               
550-717
               

               
Cow position:
               
chr25:19576700-19576539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
31, 13
               

               
Conread position:
               
551-709
               

               
Cow position:
               
chr25:33550245-33550402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
551-717
               

               
Cow position:
               
chr25:7306037-7306203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
552-698
               

               
Cow position:
               
chr25:19633877-19633737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
553-709
               

               
Cow position:
               
chr25:33691295-33691450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
553-712
               

               
Cow position:
               
chr25:5837225-5837066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
553-715
               

               
Cow position:
               
chr25:11978958-11978801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
20, 43
               

               
Conread position:
               
553-717
               

               
Cow position:
               
chr25:36026748-36026910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
153, 104
               

               
Conread position:
               
554-699
               

               
Cow position:
               
chr25:33260482-33260623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
554-712
               

               
Cow position:
               
chr25:28920633-28920789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
16, 89
               

               
Conread position:
               
557-678
               

               
Cow position:
               
chr25:14809055-14809177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
34, 73
               

               
Conread position:
               
557-685
               

               
Cow position:
               
chr25:2517291-2517414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
557-688
               

               
Cow position:
               
chr25:12174760-12174629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
557-695
               

               
Cow position:
               
chr25:10949807-10949679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
557-699
               

               
Cow position:
               
chr25:18452869-18453014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
70, 39
               

               
Conread position:
               
557-701
               

               
Cow position:
               
chr25:13566590-13566732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
557-710
               

               
Cow position:
               
chr25:433331-433189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
557-710
               

               
Cow position:
               
chr25:8918533-8918377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
557-711
               

               
Cow position:
               
chr25:7581682-7581529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
557-712
               

               
Cow position:
               
chr25:14196600-14196756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
557-717
               

               
Cow position:
               
chr25:24168153-24168000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
557-717
               

               
Cow position:
               
chr25:24452423-24452266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
62, 17
               

               
Conread position:
               
557-719
               

               
Cow position:
               
chr25:15254586-15254428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
558-696
               

               
Cow position:
               
chr25:38135493-38135627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
17, 93
               

               
Conread position:
               
558-698
               

               
Cow position:
               
chr25:34668990-34669128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
558-717
               

               
Cow position:
               
chr25:22297271-22297117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
559-684
               

               
Cow position:
               
chr25:12997096-12997223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
559-702
               

               
Cow position:
               
chr25:10156338-10156475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
559-712
               

               
Cow position:
               
chr25:16001774-16001628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
22, 92
               

               
Conread position:
               
559-717
               

               
Cow position:
               
chr25:4002543-4002702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
123, 106
               

               
Conread position:
               
559-717
               

               
Cow position:
               
chr25:16400503-16400357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
135, 75
               

               
Conread position:
               
560-712
               

               
Cow position:
               
chr25:24669682-24669540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
561-695
               

               
Cow position:
               
chr25:17475774-17475638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
121, 7
               

               
Conread position:
               
562-709
               

               
Cow position:
               
chr25:24405986-24405843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
563-699
               

               
Cow position:
               
chr25:12294000-12293863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
563-710
               

               
Cow position:
               
chr25:32176470-32176322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
563-711
               

               
Cow position:
               
chr25:19129604-19129748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
11, 33
               

               
Conread position:
               
563-712
               

               
Cow position:
               
chr25:20211335-20211184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
80, 144
               

               
Conread position:
               
563-719
               

               
Cow position:
               
chr25:19679093-19679249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
566-699
               

               
Cow position:
               
chr25:24008423-24008294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
571-699
               

               
Cow position:
               
chr25:18988135-18988262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
571-699
               

               
Cow position:
               
chr25:21289099-21289227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
571-717
               

               
Cow position:
               
chr25:15377092-15377229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
572-704
               

               
Cow position:
               
chr25:33572446-33572315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
573-717
               

               
Cow position:
               
chr25:7329305-7329449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
574-701
               

               
Cow position:
               
chr25:19478449-19478577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
575-718
               

               
Cow position:
               
chr25:13380853-13380709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
576-699
               

               
Cow position:
               
chr25:61421-61540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
578-717
               

               
Cow position:
               
chr25:6256172-6256035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
119, 41
               

               
Conread position:
               
582-712
               

               
Cow position:
               
chr25:6961380-6961258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
582-717
               

               
Cow position:
               
chr25:36033206-36033339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
584-705
               

               
Cow position:
               
chr25:35902011-35902131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
584-712
               

               
Cow position:
               
chr25:34169726-34169850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
585-710
               

               
Cow position:
               
chr25:2624576-2624703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
585-711
               

               
Cow position:
               
chr25:36557459-36557585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
593-711
               

               
Cow position:
               
chr25:12899536-12899652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
601-715
               

               
Cow position:
               
chr25:33556756-33556866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
602-718
               

               
Cow position:
               
chr25:26090025-26089912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
8, 50
               

               
Conread position:
               
604-717
               

               
Cow position:
               
chr25:26270142-26270032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
99, 46
               

               
Conread position:
               
606-710
               

               
Cow position:
               
chr25:13272363-13272467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
619-722
               

               
Cow position:
               
chr25:32453591-32453487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
95, 0
               
Show alignments to all cow chromosomes.