Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8028B23.5
        

               Conread position:
               4-699
               

               Cow position:
               chr4:62654495-62653802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               696
               

               Alignm identity:
               199
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               545, 0
               

               Conread position:
               291-699
               

               Cow position:
               chr4:10534033-10533628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               258, 0
               

               Conread position:
               351-695
               

               Cow position:
               chr4:20474-20792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               241
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               370-717
               

               Cow position:
               chr4:19558294-19558615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               251
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               170, 20
               

               Conread position:
               372-699
               

               Cow position:
               chr4:53701099-53701409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               373-639
               

               Cow position:
               chr4:53125706-53125959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               373-699
               

               Cow position:
               chr4:38799625-38799316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 35
               

               Conread position:
               374-541
               

               Cow position:
               chr4:16143459-16143621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               374-543
               

               Cow position:
               chr4:36755294-36755451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               374-641
               

               Cow position:
               chr4:42278672-42278407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               198
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               81, 39
               

               Conread position:
               374-658
               

               Cow position:
               chr4:30170820-30170547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               213
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               59, 153
               

               Conread position:
               374-696
               

               Cow position:
               chr4:28378076-28377778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 34
               

               Conread position:
               374-699
               

               Cow position:
               chr4:23494486-23494809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               224
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               47, 210
               

               Conread position:
               374-699
               

               Cow position:
               chr4:24140410-24140725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               219
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               374-702
               

               Cow position:
               chr4:6166762-6166449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               226
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               52, 92
               

               Conread position:
               374-704
               

               Cow position:
               chr4:11309180-11309512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               108, 70
               

               Conread position:
               374-717
               

               Cow position:
               chr4:21392238-21391917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 51
               

               Conread position:
               374-717
               

               Cow position:
               chr4:41097490-41097814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               330, 70
               

               Conread position:
               375-699
               

               Cow position:
               chr4:16736081-16736382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               378-702
               

               Cow position:
               chr4:54146916-54146595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               228
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               65, 24
               

               Conread position:
               379-649
               

               Cow position:
               chr4:38467186-38467446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               193
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               380-704
               

               Cow position:
               chr4:18519304-18519614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               390-630
               

               Cow position:
               chr4:1373969-1374203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               184, 148
               

               Conread position:
               390-717
               

               Cow position:
               chr4:40415056-40414732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 56
               

               Conread position:
               399-710
               

               Cow position:
               chr4:22528796-22528499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               221
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               28, 53
               

               Conread position:
               401-710
               

               Cow position:
               chr4:23311674-23311369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               219
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               283, 148
               

               Conread position:
               401-717
               

               Cow position:
               chr4:8133950-8133642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               38, 150
               

               Conread position:
               403-699
               

               Cow position:
               chr4:43543144-43542851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 7
               

               Conread position:
               403-699
               

               Cow position:
               chr4:55271168-55270879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 5
               

               Conread position:
               403-704
               

               Cow position:
               chr4:8203047-8202746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               208
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               12, 148
               

               Conread position:
               404-683
               

               Cow position:
               chr4:16832000-16831727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               16, 99
               

               Conread position:
               405-701
               

               Cow position:
               chr4:41833672-41833385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               212
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               14, 39
               

               Conread position:
               406-717
               

               Cow position:
               chr4:37620300-37619991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 6
               

               Conread position:
               407-546
               

               Cow position:
               chr4:44073221-44073081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               407-620
               

               Cow position:
               chr4:17774997-17774789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               164
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               407-699
               

               Cow position:
               chr4:63061650-63061367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               200
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               31, 73
               

               Conread position:
               407-704
               

               Cow position:
               chr4:10993951-10993668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               213
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               5, 24
               

               Conread position:
               407-708
               

               Cow position:
               chr4:47730463-47730744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 17
               

               Conread position:
               407-710
               

               Cow position:
               chr4:4185713-4186013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 17
               

               Conread position:
               407-710
               

               Cow position:
               chr4:22115179-22115496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               5, 22
               

               Conread position:
               407-711
               

               Cow position:
               chr4:11925508-11925211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               291, 126
               

               Conread position:
               407-712
               

               Cow position:
               chr4:1736879-1737182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               5, 38
               

               Conread position:
               407-712
               

               Cow position:
               chr4:1760623-1760320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               5, 38
               

               Conread position:
               407-712
               

               Cow position:
               chr4:31136346-31136642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               205, 79
               

               Conread position:
               407-717
               

               Cow position:
               chr4:12018153-12018458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               291, 118
               

               Conread position:
               407-731
               

               Cow position:
               chr4:36660134-36659814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               408-685
               

               Cow position:
               chr4:64875647-64875922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               198
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               43, 47
               

               Conread position:
               408-704
               

               Cow position:
               chr4:10136137-10136423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               408-704
               

               Cow position:
               chr4:26874356-26874063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               206
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               408-712
               

               Cow position:
               chr4:19497654-19497361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               408-714
               

               Cow position:
               chr4:18099374-18099081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               409-699
               

               Cow position:
               chr4:38309542-38309256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 235
               

               Conread position:
               410-702
               

               Cow position:
               chr4:25906732-25906444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 35
               

               Conread position:
               410-718
               

               Cow position:
               chr4:19237838-19238136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               223
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               287, 68
               

               Conread position:
               411-538
               

               Cow position:
               chr4:67408090-67408216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               411-548
               

               Cow position:
               chr4:3283874-3283738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               102
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               411-551
               

               Cow position:
               chr4:10378841-10378702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               411-561
               

               Cow position:
               chr4:12260455-12260308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               411-643
               

               Cow position:
               chr4:18108386-18108622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               127, 12
               

               Conread position:
               411-662
               

               Cow position:
               chr4:67706412-67706655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               411-684
               

               Cow position:
               chr4:61972878-61972608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 17
               

               Conread position:
               411-699
               

               Cow position:
               chr4:19584301-19584586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               411-699
               

               Cow position:
               chr4:21058793-21058504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 18
               

               Conread position:
               411-699
               

               Cow position:
               chr4:34171972-34171692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 19
               

               Conread position:
               411-699
               

               Cow position:
               chr4:42672768-42673053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               411-699
               

               Cow position:
               chr4:58857141-58856857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               202
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               8, 134
               

               Conread position:
               411-699
               

               Cow position:
               chr4:68944579-68944294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               411-699
               

               Cow position:
               chr4:69017965-69018245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               411-702
               

               Cow position:
               chr4:18255461-18255737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               213
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               411-704
               

               Cow position:
               chr4:23526288-23526577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 12
               

               Conread position:
               411-709
               

               Cow position:
               chr4:33971298-33971010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 12
               

               Conread position:
               411-712
               

               Cow position:
               chr4:22841947-22842238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               411-712
               

               Cow position:
               chr4:26549051-26549350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               9, 45
               

               Conread position:
               411-712
               

               Cow position:
               chr4:61391602-61391313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 12
               

               Conread position:
               411-712
               

               Cow position:
               chr4:63459618-63459321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 12
               

               Conread position:
               411-712
               

               Cow position:
               chr4:68387392-68387682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               216
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               412-717
               

               Cow position:
               chr4:22236877-22236584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               229
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               102, 11
               

               Conread position:
               413-683
               

               Cow position:
               chr4:7559921-7559651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               19, 129
               

               Conread position:
               413-687
               

               Cow position:
               chr4:14402700-14402428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               175, 136
               

               Conread position:
               413-699
               

               Cow position:
               chr4:10055810-10056086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               207
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               413-699
               

               Cow position:
               chr4:43148001-43148285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 16
               

               Conread position:
               414-706
               

               Cow position:
               chr4:29186705-29186419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               50, 57
               

               Conread position:
               415-551
               

               Cow position:
               chr4:15119544-15119681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               415-692
               

               Cow position:
               chr4:27348794-27349058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               415-699
               

               Cow position:
               chr4:6465703-6465985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               13, 135
               

               Conread position:
               415-699
               

               Cow position:
               chr4:15282962-15283245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               200
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               38, 130
               

               Conread position:
               415-699
               

               Cow position:
               chr4:25369717-25369998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 115
               

               Conread position:
               415-701
               

               Cow position:
               chr4:34347438-34347154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               415-704
               

               Cow position:
               chr4:24671577-24671291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 126
               

               Conread position:
               415-710
               

               Cow position:
               chr4:19306858-19307148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               415-710
               

               Cow position:
               chr4:25972498-25972785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 129
               

               Conread position:
               415-711
               

               Cow position:
               chr4:17124691-17124406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               218
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               165, 141
               

               Conread position:
               415-711
               

               Cow position:
               chr4:47774029-47773746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               415-712
               

               Cow position:
               chr4:62618107-62618411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               140, 56
               

               Conread position:
               415-715
               

               Cow position:
               chr4:3439995-3440300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               207
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               10, 38
               

               Conread position:
               416-699
               

               Cow position:
               chr4:23535855-23536129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               137, 63
               

               Conread position:
               416-699
               

               Cow position:
               chr4:30287927-30288205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               196
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               78, 57
               

               Conread position:
               416-699
               

               Cow position:
               chr4:63251319-63251042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               158, 34
               

               Conread position:
               416-701
               

               Cow position:
               chr4:44684568-44684277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               8, 22
               

               Conread position:
               416-706
               

               Cow position:
               chr4:14159523-14159243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               209
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               416-712
               

               Cow position:
               chr4:2244387-2244095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 126
               

               Conread position:
               417-582
               

               Cow position:
               chr4:6414312-6414475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               417-582
               

               Cow position:
               chr4:6446316-6446479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               417-584
               

               Cow position:
               chr4:8414758-8414593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               417-672
               

               Cow position:
               chr4:8377578-8377325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               417-672
               

               Cow position:
               chr4:19575087-19575337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               417-673
               

               Cow position:
               chr4:64061470-64061215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               58, 133
               

               Conread position:
               417-687
               

               Cow position:
               chr4:54695476-54695208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               417-696
               

               Cow position:
               chr4:38152699-38152422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               417-699
               

               Cow position:
               chr4:533849-534122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               417-699
               

               Cow position:
               chr4:1007449-1007728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               200
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               64, 133
               

               Conread position:
               417-699
               

               Cow position:
               chr4:10420801-10421081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               196
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               417-699
               

               Cow position:
               chr4:15500900-15500620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               196
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               417-699
               

               Cow position:
               chr4:18738184-18737904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               193
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               417-699
               

               Cow position:
               chr4:21008675-21008395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               196
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               417-699
               

               Cow position:
               chr4:27337770-27338049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               201
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               417-699
               

               Cow position:
               chr4:29312538-29312817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               191
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               417-699
               

               Cow position:
               chr4:44493982-44493702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               196
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               417-699
               

               Cow position:
               chr4:47087481-47087213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               191
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               417-699
               

               Cow position:
               chr4:48736438-48736718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               199
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               417-699
               

               Cow position:
               chr4:50802192-50802472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               200
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               417-699
               

               Cow position:
               chr4:57240051-57240331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               195
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               417-699
               

               Cow position:
               chr4:59383905-59383623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               198
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               212, 132
               

               Conread position:
               417-699
               

               Cow position:
               chr4:62014397-62014119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               194
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               417-706
               

               Cow position:
               chr4:60788812-60789101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               201
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               94, 98
               

               Conread position:
               417-712
               

               Cow position:
               chr4:16859162-16858870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               205
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               417-714
               

               Cow position:
               chr4:5777430-5777140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               215
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               280, 229
               

               Conread position:
               418-642
               

               Cow position:
               chr4:17375853-17375634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               418-673
               

               Cow position:
               chr4:48959291-48959039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               418-695
               

               Cow position:
               chr4:32440754-32441027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               187, 28
               

               Conread position:
               418-699
               

               Cow position:
               chr4:5883036-5883315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               199
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               418-699
               

               Cow position:
               chr4:6210296-6210573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               418-699
               

               Cow position:
               chr4:9005880-9006159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               196
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               420-572
               

               Cow position:
               chr4:652590-652740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               420-573
               

               Cow position:
               chr4:13375180-13375331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               420-583
               

               Cow position:
               chr4:9375530-9375369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               420-583
               

               Cow position:
               chr4:62120571-62120732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               420-622
               

               Cow position:
               chr4:24807471-24807271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               420-622
               

               Cow position:
               chr4:31774756-31774556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               420-640
               

               Cow position:
               chr4:120127-119910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               420-648
               

               Cow position:
               chr4:68844813-68845039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               420-657
               

               Cow position:
               chr4:33628724-33628488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               231, 129
               

               Conread position:
               420-672
               

               Cow position:
               chr4:4169381-4169631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               420-672
               

               Cow position:
               chr4:4487528-4487778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               420-672
               

               Cow position:
               chr4:26131721-26131971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               420-685
               

               Cow position:
               chr4:33020081-33019818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               187
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               420-688
               

               Cow position:
               chr4:54161504-54161238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               186
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               420-689
               

               Cow position:
               chr4:3446634-3446367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               189
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               420-689
               

               Cow position:
               chr4:7260248-7259981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               420-693
               

               Cow position:
               chr4:162643-162913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               420-693
               

               Cow position:
               chr4:20616151-20615883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               420-693
               

               Cow position:
               chr4:54962407-54962678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               192
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               420-696
               

               Cow position:
               chr4:607168-607442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               193
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               420-696
               

               Cow position:
               chr4:31535378-31535652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               194
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               420-696
               

               Cow position:
               chr4:42616747-42617021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               189
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               420-696
               

               Cow position:
               chr4:42865570-42865844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               197
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               420-699
               

               Cow position:
               chr4:3800726-3800447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               35, 130
               

               Conread position:
               420-699
               

               Cow position:
               chr4:6150833-6150556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               420-699
               

               Cow position:
               chr4:6457174-6456897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               420-699
               

               Cow position:
               chr4:6547127-6546850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               194
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               420-699
               

               Cow position:
               chr4:6862642-6862362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               238, 129
               

               Conread position:
               420-699
               

               Cow position:
               chr4:7138803-7138526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               194
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               420-699
               

               Cow position:
               chr4:8678365-8678643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               197
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               150, 129
               

               Conread position:
               420-699
               

               Cow position:
               chr4:9041510-9041787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               196
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               420-699
               

               Cow position:
               chr4:10122969-10123246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               420-699
               

               Cow position:
               chr4:10403891-10404168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               420-699
               

               Cow position:
               chr4:11191569-11191841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               195
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               420-699
               

               Cow position:
               chr4:11641013-11640738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               420-699
               

               Cow position:
               chr4:14047987-14048264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               196
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               420-699
               

               Cow position:
               chr4:16000735-16000458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               420-699
               

               Cow position:
               chr4:17822093-17822369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               420-699
               

               Cow position:
               chr4:18186837-18186560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               420-699
               

               Cow position:
               chr4:18335384-18335108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               195
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               420-699
               

               Cow position:
               chr4:18975893-18975616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               420-699
               

               Cow position:
               chr4:20025199-20025476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               195
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               420-699
               

               Cow position:
               chr4:22086375-22086098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               420-699
               

               Cow position:
               chr4:22896648-22896364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               202
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               95, 90
               

               Conread position:
               420-699
               

               Cow position:
               chr4:25045493-25045216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               198
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               420-699
               

               Cow position:
               chr4:26347481-26347204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               420-699
               

               Cow position:
               chr4:26538227-26538504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               198
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               420-699
               

               Cow position:
               chr4:28147667-28147390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               195
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               420-699
               

               Cow position:
               chr4:28234606-28234329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               189
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               420-699
               

               Cow position:
               chr4:29189030-29188753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               198
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               420-699
               

               Cow position:
               chr4:29515544-29515821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               197
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               420-699
               

               Cow position:
               chr4:32405124-32405401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               198
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               420-699
               

               Cow position:
               chr4:34644174-34643896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               257, 129
               

               Conread position:
               420-699
               

               Cow position:
               chr4:36350416-36350693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               195
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               420-699
               

               Cow position:
               chr4:37707592-37707315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               195
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               420-699
               

               Cow position:
               chr4:38584440-38584719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               262, 129
               

               Conread position:
               420-699
               

               Cow position:
               chr4:38864614-38864890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               196
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               420-699
               

               Cow position:
               chr4:41429669-41429392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               197
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               420-699
               

               Cow position:
               chr4:46021153-46021430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               198
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               420-699
               

               Cow position:
               chr4:46743685-46743408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               420-699
               

               Cow position:
               chr4:47020865-47021142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               194
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               420-699
               

               Cow position:
               chr4:48411347-48411070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               420-699
               

               Cow position:
               chr4:48733239-48733513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               420-699
               

               Cow position:
               chr4:49176049-49176326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               420-699
               

               Cow position:
               chr4:50018986-50018709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               195
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               420-699
               

               Cow position:
               chr4:53316474-53316195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               49, 131
               

               Conread position:
               420-699
               

               Cow position:
               chr4:58292293-58292571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               262, 102
               

               Conread position:
               420-699
               

               Cow position:
               chr4:63002011-63002278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               420-699
               

               Cow position:
               chr4:63195020-63194743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               196
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               420-704
               

               Cow position:
               chr4:10044206-10043924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               198
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               420-704
               

               Cow position:
               chr4:14386712-14386430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               420-704
               

               Cow position:
               chr4:42498138-42498419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               194
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               420-711
               

               Cow position:
               chr4:604497-604207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               205
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               278, 129
               

               Conread position:
               420-711
               

               Cow position:
               chr4:4772274-4772564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               196
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               278, 129
               

               Conread position:
               420-711
               

               Cow position:
               chr4:6231921-6232211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               202
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               278, 129
               

               Conread position:
               420-711
               

               Cow position:
               chr4:6395651-6395941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               204
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               278, 129
               

               Conread position:
               420-711
               

               Cow position:
               chr4:7080452-7080742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               204
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               278, 129
               

               Conread position:
               420-711
               

               Cow position:
               chr4:7584676-7584966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               204
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               278, 129
               

               Conread position:
               420-711
               

               Cow position:
               chr4:10397592-10397882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               205
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               278, 129
               

               Conread position:
               420-711
               

               Cow position:
               chr4:10425040-10425330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               278, 129
               

               Conread position:
               420-711
               

               Cow position:
               chr4:13764332-13764042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               204
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               278, 129
               

               Conread position:
               420-711
               

               Cow position:
               chr4:13834905-13835195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               207
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               278, 129
               

               Conread position:
               420-711
               

               Cow position:
               chr4:14967642-14967932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               207
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               278, 129
               

               Conread position:
               420-711
               

               Cow position:
               chr4:15618257-15618547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               202
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               278, 129
               

               Conread position:
               420-711
               

               Cow position:
               chr4:15802944-15803234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               204
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               278, 129
               

               Conread position:
               420-711
               

               Cow position:
               chr4:16765943-16765653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               205
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               278, 129
               

               Conread position:
               420-711
               

               Cow position:
               chr4:17500344-17500054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               207
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               278, 129
               

               Conread position:
               420-711
               

               Cow position:
               chr4:17752372-17752662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               204
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               278, 129
               

               Conread position:
               420-711
               

               Cow position:
               chr4:18282367-18282657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               203
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               278, 129
               

               Conread position:
               420-711
               

               Cow position:
               chr4:18331649-18331939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               203
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               278, 129
               

               Conread position:
               420-711
               

               Cow position:
               chr4:18599838-18599548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               202
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               278, 129
               

               Conread position:
               420-711
               

               Cow position:
               chr4:18672787-18673077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               202
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               278, 129
               

               Conread position:
               420-711
               

               Cow position:
               chr4:18684514-18684224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               202
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               278, 129
               

               Conread position:
               420-711
               

               Cow position:
               chr4:19025809-19025518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               205
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               79, 130
               

               Conread position:
               420-711
               

               Cow position:
               chr4:21044601-21044311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               204
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               278, 129
               

               Conread position:
               420-711
               

               Cow position:
               chr4:21553577-21553288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               206
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               278, 129
               

               Conread position:
               420-711
               

               Cow position:
               chr4:24094363-24094073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               203
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               278, 129
               

               Conread position:
               420-711
               

               Cow position:
               chr4:25865122-25865412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               203
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               278, 129
               

               Conread position:
               420-711
               

               Cow position:
               chr4:26398937-26399227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               199
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               278, 129
               

               Conread position:
               420-711
               

               Cow position:
               chr4:27918892-27918602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               278, 129
               

               Conread position:
               420-711
               

               Cow position:
               chr4:28456470-28456180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               203
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               278, 129
               

               Conread position:
               420-711
               

               Cow position:
               chr4:28855673-28855963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               203
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               278, 129
               

               Conread position:
               420-711
               

               Cow position:
               chr4:29559966-29559676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               203
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               278, 129
               

               Conread position:
               420-711
               

               Cow position:
               chr4:30474943-30475233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               205
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               278, 129
               

               Conread position:
               420-711
               

               Cow position:
               chr4:31955940-31955653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               278, 129
               

               Conread position:
               420-711
               

               Cow position:
               chr4:32658271-32657981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               206
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               278, 129
               

               Conread position:
               420-711
               

               Cow position:
               chr4:33171702-33171993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               262, 129
               

               Conread position:
               420-711
               

               Cow position:
               chr4:33554217-33553927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               206
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               278, 129
               

               Conread position:
               420-711
               

               Cow position:
               chr4:37584305-37584015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               204
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               278, 129
               

               Conread position:
               420-711
               

               Cow position:
               chr4:38834551-38834261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               204
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               278, 129
               

               Conread position:
               420-711
               

               Cow position:
               chr4:42381749-42381459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               204
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               278, 129
               

               Conread position:
               420-711
               

               Cow position:
               chr4:42596804-42597094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               203
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               278, 129
               

               Conread position:
               420-711
               

               Cow position:
               chr4:44700326-44700036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               202
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               278, 129
               

               Conread position:
               420-711
               

               Cow position:
               chr4:45105395-45105105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               274, 129
               

               Conread position:
               420-711
               

               Cow position:
               chr4:45377022-45377314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               201
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               262, 129
               

               Conread position:
               420-711
               

               Cow position:
               chr4:46585344-46585056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               278, 129
               

               Conread position:
               420-711
               

               Cow position:
               chr4:47114551-47114838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               278, 87
               

               Conread position:
               420-711
               

               Cow position:
               chr4:48894136-48894426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               278, 129
               

               Conread position:
               420-711
               

               Cow position:
               chr4:52186623-52186913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               204
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               278, 129
               

               Conread position:
               420-711
               

               Cow position:
               chr4:54339374-54339084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               278, 129
               

               Conread position:
               420-711
               

               Cow position:
               chr4:56191602-56191312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               203
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               278, 129
               

               Conread position:
               420-711
               

               Cow position:
               chr4:57493724-57493434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               206
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               278, 129
               

               Conread position:
               420-711
               

               Cow position:
               chr4:58748208-58748498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               278, 129
               

               Conread position:
               420-711
               

               Cow position:
               chr4:59838863-59839153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               203
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               278, 129
               

               Conread position:
               420-711
               

               Cow position:
               chr4:60579567-60579277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               206
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               278, 129
               

               Conread position:
               420-711
               

               Cow position:
               chr4:62221802-62221510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               200
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               262, 129
               

               Conread position:
               420-711
               

               Cow position:
               chr4:63102205-63102495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               206
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               278, 129
               

               Conread position:
               420-711
               

               Cow position:
               chr4:64156291-64156581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               278, 129
               

               Conread position:
               420-711
               

               Cow position:
               chr4:65198238-65197948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               204
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               278, 129
               

               Conread position:
               420-712
               

               Cow position:
               chr4:10823626-10823915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               278, 129
               

               Conread position:
               420-712
               

               Cow position:
               chr4:18547295-18547578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               278, 138
               

               Conread position:
               420-712
               

               Cow position:
               chr4:30307023-30306732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               196
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               278, 129
               

               Conread position:
               421-631
               

               Cow position:
               chr4:43027673-43027463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               120, 102
               

               Conread position:
               423-649
               

               Cow position:
               chr4:39406631-39406410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               196, 99
               

               Conread position:
               423-699
               

               Cow position:
               chr4:56177424-56177699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               423-712
               

               Cow position:
               chr4:11025753-11025467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               209
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               79, 106
               

               Conread position:
               423-712
               

               Cow position:
               chr4:11924784-11924501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               275, 126
               

               Conread position:
               425-699
               

               Cow position:
               chr4:5623597-5623320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               22, 118
               

               Conread position:
               425-717
               

               Cow position:
               chr4:45589977-45589703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               128, 154
               

               Conread position:
               426-712
               

               Cow position:
               chr4:2562817-2563102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               201
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               272, 123
               

               Conread position:
               429-618
               

               Cow position:
               chr4:66119199-66119014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               140, 95
               

               Conread position:
               429-637
               

               Cow position:
               chr4:67392575-67392789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               112, 74
               

               Conread position:
               429-666
               

               Cow position:
               chr4:29132810-29133045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               168, 121
               

               Conread position:
               429-672
               

               Cow position:
               chr4:66901196-66901435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               28, 83
               

               Conread position:
               429-699
               

               Cow position:
               chr4:5915799-5916066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               194
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               429-699
               

               Cow position:
               chr4:9136891-9137154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               429-704
               

               Cow position:
               chr4:61673411-61673138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               190
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               233, 117
               

               Conread position:
               429-712
               

               Cow position:
               chr4:2422195-2422474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               206
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               56, 79
               

               Conread position:
               429-712
               

               Cow position:
               chr4:13271764-13272041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               429-712
               

               Cow position:
               chr4:50760502-50760230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               209
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               185, 110
               

               Conread position:
               429-716
               

               Cow position:
               chr4:64072734-64072454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               215, 93
               

               Conread position:
               431-563
               

               Cow position:
               chr4:21233465-21233333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               107
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               116, 80
               

               Conread position:
               431-566
               

               Cow position:
               chr4:27664519-27664651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               431-578
               

               Cow position:
               chr4:49814398-49814253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               431-631
               

               Cow position:
               chr4:48142396-48142594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               157
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               431-698
               

               Cow position:
               chr4:25806516-25806779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               431-699
               

               Cow position:
               chr4:4981590-4981847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               431-699
               

               Cow position:
               chr4:11201436-11201694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               431-699
               

               Cow position:
               chr4:18096043-18095796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               222, 74
               

               Conread position:
               431-710
               

               Cow position:
               chr4:25226546-25226826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               122, 215
               

               Conread position:
               431-712
               

               Cow position:
               chr4:7429936-7430214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 102
               

               Conread position:
               431-717
               

               Cow position:
               chr4:7249953-7249673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               266, 111
               

               Conread position:
               431-717
               

               Cow position:
               chr4:26323358-26323633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               212
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               220, 97
               

               Conread position:
               432-538
               

               Cow position:
               chr4:11389962-11389856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               86
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               432-548
               

               Cow position:
               chr4:213488-213604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               432-548
               

               Cow position:
               chr4:15668677-15668562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               432-548
               

               Cow position:
               chr4:49089110-49089226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               432-552
               

               Cow position:
               chr4:22861300-22861183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               100
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               432-552
               

               Cow position:
               chr4:33613033-33612913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               432-566
               

               Cow position:
               chr4:8704388-8704520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               432-578
               

               Cow position:
               chr4:45469237-45469378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               432-582
               

               Cow position:
               chr4:4283307-4283159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               432-612
               

               Cow position:
               chr4:3421263-3421448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               148, 117
               

               Conread position:
               432-613
               

               Cow position:
               chr4:10837744-10837559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               432-618
               

               Cow position:
               chr4:1027651-1027467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               18, 95
               

               Conread position:
               432-627
               

               Cow position:
               chr4:1355893-1355707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               432-629
               

               Cow position:
               chr4:38706339-38706145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               23, 118
               

               Conread position:
               432-640
               

               Cow position:
               chr4:41999565-41999363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               432-642
               

               Cow position:
               chr4:46526617-46526825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               149, 53
               

               Conread position:
               432-649
               

               Cow position:
               chr4:19502186-19501968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               169
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               69, 119
               

               Conread position:
               432-649
               

               Cow position:
               chr4:64791503-64791709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               432-658
               

               Cow position:
               chr4:9519913-9520136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               432-663
               

               Cow position:
               chr4:1436098-1435869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               113, 92
               

               Conread position:
               432-666
               

               Cow position:
               chr4:60652257-60652490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               219, 117
               

               Conread position:
               432-669
               

               Cow position:
               chr4:1462904-1463135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               185
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               97, 17
               

               Conread position:
               432-672
               

               Cow position:
               chr4:29897110-29896874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               432-673
               

               Cow position:
               chr4:34223509-34223744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               432-681
               

               Cow position:
               chr4:38067507-38067747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               432-683
               

               Cow position:
               chr4:44839266-44839023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               432-684
               

               Cow position:
               chr4:47047358-47047611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 85
               

               Conread position:
               432-684
               

               Cow position:
               chr4:48409931-48409689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 48
               

               Conread position:
               432-687
               

               Cow position:
               chr4:66460403-66460157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               432-692
               

               Cow position:
               chr4:3972112-3972362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               246, 41
               

               Conread position:
               432-696
               

               Cow position:
               chr4:11918053-11917794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               189
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               432-696
               

               Cow position:
               chr4:20644200-20644454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               193
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               432-697
               

               Cow position:
               chr4:9697-9442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               432-697
               

               Cow position:
               chr4:22101647-22101384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               190
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               237, 12
               

               Conread position:
               432-697
               

               Cow position:
               chr4:34074296-34074031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               44, 126
               

               Conread position:
               432-698
               

               Cow position:
               chr4:11193802-11194062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               432-698
               

               Cow position:
               chr4:38845218-38845482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               432-699
               

               Cow position:
               chr4:3132900-3133152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               432-699
               

               Cow position:
               chr4:5984429-5984163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 125
               

               Conread position:
               432-699
               

               Cow position:
               chr4:7258809-7258545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               432-699
               

               Cow position:
               chr4:8439826-8439561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               432-699
               

               Cow position:
               chr4:8649865-8650120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               183
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               102, 49
               

               Conread position:
               432-699
               

               Cow position:
               chr4:16637969-16637723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               432-699
               

               Cow position:
               chr4:33564489-33564734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               432-699
               

               Cow position:
               chr4:34166348-34166100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               432-699
               

               Cow position:
               chr4:34383731-34383469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               194
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               174, 12
               

               Conread position:
               432-699
               

               Cow position:
               chr4:39273825-39274089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 118
               

               Conread position:
               432-699
               

               Cow position:
               chr4:51425488-51425751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               432-699
               

               Cow position:
               chr4:56226510-56226765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               432-699
               

               Cow position:
               chr4:61954183-61954437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               432-699
               

               Cow position:
               chr4:65972825-65972566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               432-700
               

               Cow position:
               chr4:19255941-19256197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               432-700
               

               Cow position:
               chr4:26009063-26009329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               432-700
               

               Cow position:
               chr4:52017232-52016982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               202
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               432-700
               

               Cow position:
               chr4:54445949-54445684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               432-701
               

               Cow position:
               chr4:12744269-12744529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               191, 118
               

               Conread position:
               432-701
               

               Cow position:
               chr4:46359490-46359750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               432-701
               

               Cow position:
               chr4:53128627-53128371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               432-702
               

               Cow position:
               chr4:24198176-24197919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               432-702
               

               Cow position:
               chr4:65116595-65116327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               194
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               87, 111
               

               Conread position:
               432-704
               

               Cow position:
               chr4:21588989-21588718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               202
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               123, 21
               

               Conread position:
               432-705
               

               Cow position:
               chr4:30779218-30778946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               207, 110
               

               Conread position:
               432-709
               

               Cow position:
               chr4:46477321-46477047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               432-709
               

               Cow position:
               chr4:61897915-61897648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               432-710
               

               Cow position:
               chr4:9815733-9815459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 97
               

               Conread position:
               432-710
               

               Cow position:
               chr4:14131122-14131402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               115, 157
               

               Conread position:
               432-710
               

               Cow position:
               chr4:27292343-27292067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 78
               

               Conread position:
               432-710
               

               Cow position:
               chr4:27504571-27504862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               99, 20
               

               Conread position:
               432-710
               

               Cow position:
               chr4:51898620-51898896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 21
               

               Conread position:
               432-711
               

               Cow position:
               chr4:3687542-3687813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 218
               

               Conread position:
               432-711
               

               Cow position:
               chr4:16799571-16799298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               253, 85
               

               Conread position:
               432-711
               

               Cow position:
               chr4:20139911-20139635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 155
               

               Conread position:
               432-711
               

               Cow position:
               chr4:29035535-29035808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 92
               

               Conread position:
               432-711
               

               Cow position:
               chr4:41301383-41301100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               208
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               108, 225
               

               Conread position:
               432-711
               

               Cow position:
               chr4:69405988-69406261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               202
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               83, 65
               

               Conread position:
               432-712
               

               Cow position:
               chr4:4084831-4084557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               207
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               71, 100
               

               Conread position:
               432-712
               

               Cow position:
               chr4:4319525-4319256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               200
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               176, 117
               

               Conread position:
               432-712
               

               Cow position:
               chr4:4672716-4672439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               266, 117
               

               Conread position:
               432-712
               

               Cow position:
               chr4:10731837-10732114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               265, 66
               

               Conread position:
               432-712
               

               Cow position:
               chr4:12464465-12464739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               432-712
               

               Cow position:
               chr4:12560644-12560921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               112, 53
               

               Conread position:
               432-712
               

               Cow position:
               chr4:12903434-12903709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               432-712
               

               Cow position:
               chr4:13694051-13693783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               432-712
               

               Cow position:
               chr4:14930081-14930367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               127, 211
               

               Conread position:
               432-712
               

               Cow position:
               chr4:15623459-15623734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               83, 110
               

               Conread position:
               432-712
               

               Cow position:
               chr4:16602438-16602162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 145
               

               Conread position:
               432-712
               

               Cow position:
               chr4:19438062-19438351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               215
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               66, 229
               

               Conread position:
               432-712
               

               Cow position:
               chr4:21257509-21257234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               432-712
               

               Cow position:
               chr4:22138617-22138340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 81
               

               Conread position:
               432-712
               

               Cow position:
               chr4:23655611-23655890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 110
               

               Conread position:
               432-712
               

               Cow position:
               chr4:24458482-24458208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               432-712
               

               Cow position:
               chr4:27540238-27540512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               432-712
               

               Cow position:
               chr4:36840897-36841174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 96
               

               Conread position:
               432-712
               

               Cow position:
               chr4:37703883-37704157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               241, 117
               

               Conread position:
               432-712
               

               Cow position:
               chr4:38181310-38181573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               206
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               149, 111
               

               Conread position:
               432-712
               

               Cow position:
               chr4:46176851-46176568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               204
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               74, 128
               

               Conread position:
               432-712
               

               Cow position:
               chr4:46258098-46258377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               117, 220
               

               Conread position:
               432-712
               

               Cow position:
               chr4:48152753-48152474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 119
               

               Conread position:
               432-712
               

               Cow position:
               chr4:48784593-48784868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               266, 96
               

               Conread position:
               432-712
               

               Cow position:
               chr4:49213101-49212823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 39
               

               Conread position:
               432-712
               

               Cow position:
               chr4:51850816-51851097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 70
               

               Conread position:
               432-712
               

               Cow position:
               chr4:54501832-54501558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               432-712
               

               Cow position:
               chr4:62157888-62158164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               203
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               38, 94
               

               Conread position:
               432-713
               

               Cow position:
               chr4:18602640-18602362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               202
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               266, 117
               

               Conread position:
               432-714
               

               Cow position:
               chr4:17585401-17585126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               262, 117
               

               Conread position:
               432-717
               

               Cow position:
               chr4:11091063-11090796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               213
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               264, 96
               

               Conread position:
               432-717
               

               Cow position:
               chr4:13589712-13589984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               218
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               149, 22
               

               Conread position:
               432-717
               

               Cow position:
               chr4:14513619-14513340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               262, 49
               

               Conread position:
               432-717
               

               Cow position:
               chr4:19434877-19435155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               208
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               74, 119
               

               Conread position:
               432-717
               

               Cow position:
               chr4:21532012-21531748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 78
               

               Conread position:
               432-717
               

               Cow position:
               chr4:22073686-22073419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               213
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               102, 27
               

               Conread position:
               432-717
               

               Cow position:
               chr4:25197880-25197598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               209
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               265, 118
               

               Conread position:
               432-717
               

               Cow position:
               chr4:26175626-26175345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               205
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               259, 117
               

               Conread position:
               432-717
               

               Cow position:
               chr4:28613438-28613720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               432-717
               

               Cow position:
               chr4:30690355-30690617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               217
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               274, 70
               

               Conread position:
               432-717
               

               Cow position:
               chr4:36892973-36893253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               432-717
               

               Cow position:
               chr4:42480803-42481087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 95
               

               Conread position:
               432-717
               

               Cow position:
               chr4:43370232-43369956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               264, 11
               

               Conread position:
               432-717
               

               Cow position:
               chr4:46059123-46058856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               432-717
               

               Cow position:
               chr4:62772320-62772029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 119
               

               Conread position:
               432-717
               

               Cow position:
               chr4:68362557-68362826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 90
               

               Conread position:
               432-718
               

               Cow position:
               chr4:1014687-1014965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               204
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               266, 92
               

               Conread position:
               432-718
               

               Cow position:
               chr4:13327337-13327056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               265, 96
               

               Conread position:
               432-718
               

               Cow position:
               chr4:54190725-54190984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               209
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               432-720
               

               Cow position:
               chr4:65179516-65179229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 14
               

               Conread position:
               432-720
               

               Cow position:
               chr4:66918513-66918809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 274
               

               Conread position:
               433-545
               

               Cow position:
               chr4:51866517-51866629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               433-552
               

               Cow position:
               chr4:33497135-33497254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               94
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               433-583
               

               Cow position:
               chr4:61170111-61169963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               433-587
               

               Cow position:
               chr4:11921567-11921416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               433-602
               

               Cow position:
               chr4:36577976-36577814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               433-645
               

               Cow position:
               chr4:36025695-36025488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               433-649
               

               Cow position:
               chr4:15635825-15635612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               433-649
               

               Cow position:
               chr4:28399779-28399576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               433-662
               

               Cow position:
               chr4:23150083-23149859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               433-663
               

               Cow position:
               chr4:42328781-42328551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               216, 116
               

               Conread position:
               433-666
               

               Cow position:
               chr4:36971316-36971089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               433-666
               

               Cow position:
               chr4:47268986-47268757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               433-685
               

               Cow position:
               chr4:10885211-10885459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               187, 95
               

               Conread position:
               433-689
               

               Cow position:
               chr4:47978589-47978838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               81, 117
               

               Conread position:
               433-693
               

               Cow position:
               chr4:50194110-50194362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               433-694
               

               Cow position:
               chr4:54607338-54607085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               99, 69
               

               Conread position:
               433-697
               

               Cow position:
               chr4:62953639-62953886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               433-699
               

               Cow position:
               chr4:2253766-2254030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               185
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               433-699
               

               Cow position:
               chr4:3170894-3171149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               433-699
               

               Cow position:
               chr4:6034473-6034209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               191
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               433-699
               

               Cow position:
               chr4:12237673-12237409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               191
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               18, 22
               

               Conread position:
               433-699
               

               Cow position:
               chr4:14230007-14229741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               190
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               168, 116
               

               Conread position:
               433-699
               

               Cow position:
               chr4:16339971-16339715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               190
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               433-699
               

               Cow position:
               chr4:16364897-16365161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               433-699
               

               Cow position:
               chr4:17067522-17067263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               433-699
               

               Cow position:
               chr4:23558104-23558367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               433-699
               

               Cow position:
               chr4:27466313-27466577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               245, 0
               

               Conread position:
               433-699
               

               Cow position:
               chr4:30435834-30436099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               71, 117
               

               Conread position:
               433-699
               

               Cow position:
               chr4:33372194-33371930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               191
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               433-699
               

               Cow position:
               chr4:37169195-37168945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               433-699
               

               Cow position:
               chr4:47264353-47264617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               191
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               433-699
               

               Cow position:
               chr4:51859868-51860134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               249, 116
               

               Conread position:
               433-699
               

               Cow position:
               chr4:58006410-58006670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               188
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               248, 91
               

               Conread position:
               433-701
               

               Cow position:
               chr4:561021-561285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               211, 37
               

               Conread position:
               433-702
               

               Cow position:
               chr4:10992578-10992316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               199
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               250, 44
               

               Conread position:
               433-702
               

               Cow position:
               chr4:20328095-20327829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 96
               

               Conread position:
               433-703
               

               Cow position:
               chr4:28676594-28676326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               433-704
               

               Cow position:
               chr4:359458-359728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               196
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               99, 124
               

               Conread position:
               433-704
               

               Cow position:
               chr4:1046899-1046635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               433-704
               

               Cow position:
               chr4:4380157-4380411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               433-704
               

               Cow position:
               chr4:12589169-12589441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               121, 16
               

               Conread position:
               433-704
               

               Cow position:
               chr4:14814144-14814411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               84, 96
               

               Conread position:
               433-704
               

               Cow position:
               chr4:17282947-17282677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               194
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               70, 117
               

               Conread position:
               433-704
               

               Cow position:
               chr4:17616314-17616583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               194
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               433-704
               

               Cow position:
               chr4:19835638-19835372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               433-704
               

               Cow position:
               chr4:25595912-25595646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               189
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               433-704
               

               Cow position:
               chr4:27178398-27178667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               193
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               433-704
               

               Cow position:
               chr4:34713388-34713657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               433-704
               

               Cow position:
               chr4:39422171-39422440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               189
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               50, 55
               

               Conread position:
               433-704
               

               Cow position:
               chr4:43316080-43315812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               175, 116
               

               Conread position:
               433-704
               

               Cow position:
               chr4:43895924-43895649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               68, 121
               

               Conread position:
               433-704
               

               Cow position:
               chr4:44734193-44734462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               18, 22
               

               Conread position:
               433-704
               

               Cow position:
               chr4:48030433-48030702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               195
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               433-704
               

               Cow position:
               chr4:52601674-52601943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               197
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               18, 22
               

               Conread position:
               433-704
               

               Cow position:
               chr4:53830050-53830319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               192
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               264, 116
               

               Conread position:
               433-704
               

               Cow position:
               chr4:54757696-54757431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               433-704
               

               Cow position:
               chr4:67651861-67651589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               78, 121
               

               Conread position:
               433-705
               

               Cow position:
               chr4:3354370-3354100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               433-706
               

               Cow position:
               chr4:23382184-23381921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               200
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               9, 89
               

               Conread position:
               433-707
               

               Cow position:
               chr4:41598934-41599209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               244, 116
               

               Conread position:
               433-710
               

               Cow position:
               chr4:962032-961775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               433-710
               

               Cow position:
               chr4:2121774-2121504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               38, 21
               

               Conread position:
               433-710
               

               Cow position:
               chr4:3450606-3450875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               265, 112
               

               Conread position:
               433-710
               

               Cow position:
               chr4:8413491-8413231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               433-710
               

               Cow position:
               chr4:19207008-19207279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               71, 17
               

               Conread position:
               433-710
               

               Cow position:
               chr4:22051850-22051580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 117
               

               Conread position:
               433-710
               

               Cow position:
               chr4:24002351-24002079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               433-710
               

               Cow position:
               chr4:59888981-59888706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               200
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               112, 13
               

               Conread position:
               433-711
               

               Cow position:
               chr4:15793674-15793952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               199
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               54, 117
               

               Conread position:
               433-711
               

               Cow position:
               chr4:38564831-38565107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               265, 116
               

               Conread position:
               433-711
               

               Cow position:
               chr4:54540619-54540896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               200
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               265, 116
               

               Conread position:
               433-711
               

               Cow position:
               chr4:60677158-60676881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               197
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               265, 116
               

               Conread position:
               433-711
               

               Cow position:
               chr4:60856299-60856576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               198
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               265, 116
               

               Conread position:
               433-711
               

               Cow position:
               chr4:62453412-62453135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               196
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               265, 116
               

               Conread position:
               433-711
               

               Cow position:
               chr4:66112456-66112183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               433-712
               

               Cow position:
               chr4:11872294-11872017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               433-712
               

               Cow position:
               chr4:14742873-14743153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 127
               

               Conread position:
               433-712
               

               Cow position:
               chr4:14941932-14942211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               192
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               122, 52
               

               Conread position:
               433-712
               

               Cow position:
               chr4:22073050-22072779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               433-712
               

               Cow position:
               chr4:24432265-24432532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               122, 59
               

               Conread position:
               433-712
               

               Cow position:
               chr4:25983856-25984117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               209
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               148, 95
               
UCSC Genome Browser
               Conread position:
               433-712
               

               Cow position:
               chr4:27546378-27546657 (view  custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               199
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               235, 26
               
UCSC Genome Browser
               
               
               
Conread position: 433-712

               
               
               
Cow position: chr4:44956585-44956294 (view  custom track)

               
               
               
Alignm length: 294

               
               
               
Alignm identity: 209

               
               
               
Alignm E-value: 3e-39

               
               
               
Alignm gaps (pig, cow): 136, 116
UCSC Genome Browser
               
               
               
Conread position: 433-712

               
               
               
Cow position: chr4:65650503-65650232 (view  custom track)

               
               
               
Alignm length: 282

               
               
               
Alignm identity: 204

               
               
               
Alignm E-value: 4.99983e-42

               
               
               
Alignm gaps (pig, cow): 263, 107

               
               
               Conread position:433-715
               
               
               Cow position:chr4:1061309-1061044 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:193
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):72, 23

               
               
               Conread position:433-715
               
               
               Cow position:chr4:61304802-61304526 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:209
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):88, 0

               
               
               Conread position:433-717
               
               
               Cow position:chr4:13979616-13979896 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:205
               
               
               Alignm E-value:3e-39
               
               
               Alignm gaps (pig, cow):18, 22

               
               
               Conread position:433-717
               
               
               Cow position:chr4:14353063-14352775 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:292
               
               
               Alignm identity:208
               
               
               Alignm E-value:1.99965e-42
               
               
               Alignm gaps (pig, cow):156, 116

               
               
               Conread position:433-717
               
               
               Cow position:chr4:29529242-29528960 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:286
               
               
               Alignm identity:196
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):265, 116

               
               
               Conread position:433-717
               
               
               Cow position:chr4:30574074-30574347 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:220
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):116, 0

               
               
               Conread position:433-717
               
               
               Cow position:chr4:33097340-33097080 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:206
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):52, 0

               
               
               Conread position:433-717
               
               
               Cow position:chr4:39009587-39009862 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:204
               
               
               Alignm E-value:4.99983e-42
               
               
               Alignm gaps (pig, cow):116, 0

               
               
               Conread position:433-717
               
               
               Cow position:chr4:43866229-43865961 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:216
               
               
               Alignm E-value:5.00264e-43
               
               
               Alignm gaps (pig, cow):7, 53

               
               
               Conread position:433-717
               
               
               Cow position:chr4:56409800-56410084 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:235
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):259, 125

               
               
               Conread position:433-717
               
               
               Cow position:chr4:58823302-58823017 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:199
               
               
               Alignm E-value:1e-38
               
               
               Alignm gaps (pig, cow):187, 133

               
               
               Conread position:433-717
               
               
               Cow position:chr4:64833102-64833384 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:289
               
               
               Alignm identity:194
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):191, 116

               
               
               Conread position:433-720
               
               
               Cow position:chr4:66173176-66172899 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:217
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):95, 0

               
               
               Conread position:433-728
               
               
               Cow position:chr4:23303693-23303399 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:297
               
               
               Alignm identity:207
               
               
               Alignm E-value:2.00386e-43
               
               
               Alignm gaps (pig, cow):265, 116

               
               
               Conread position:434-541
               
               
               Cow position:chr4:55522921-55523028 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:108
               
               
               Alignm identity:86
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:434-543
               
               
               Cow position:chr4:43840405-43840296 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:110
               
               
               Alignm identity:88
               
               
               Alignm E-value:5e-22
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:434-547
               
               
               Cow position:chr4:55395102-55395215 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:114
               
               
               Alignm identity:89
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:434-548
               
               
               Cow position:chr4:42638735-42638622 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:115
               
               
               Alignm identity:94
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):93, 0

               
               
               Conread position:434-548
               
               
               Cow position:chr4:53822509-53822623 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:115
               
               
               Alignm identity:94
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:434-551
               
               
               Cow position:chr4:41866829-41866947 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:119
               
               
               Alignm identity:99
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):9, 0

               
               
               Conread position:434-551
               
               
               Cow position:chr4:54931053-54930937 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:118
               
               
               Alignm identity:93
               
               
               Alignm E-value:5e-22
               
               
               Alignm gaps (pig, cow):51, 0

               
               
               Conread position:434-590
               
               
               Cow position:chr4:65538956-65538801 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:158
               
               
               Alignm identity:117
               
               
               Alignm E-value:6e-24
               
               
               Alignm gaps (pig, cow):142, 115

               
               
               Conread position:434-597
               
               
               Cow position:chr4:21162312-21162475 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:166
               
               
               Alignm identity:121
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):65, 117

               
               
               Conread position:434-602
               
               
               Cow position:chr4:12605306-12605148 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:169
               
               
               Alignm identity:131
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):68, 0

               
               
               Conread position:434-605
               
               
               Cow position:chr4:1491240-1491074 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:172
               
               
               Alignm identity:131
               
               
               Alignm E-value:4e-30
               
               
               Alignm gaps (pig, cow):92, 0

               
               
               Conread position:434-621
               
               
               Cow position:chr4:9649646-9649832 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:190
               
               
               Alignm identity:138
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):144, 125

               
               
               Conread position:434-624
               
               
               Cow position:chr4:22366749-22366934 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:191
               
               
               Alignm identity:142
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):99, 0

               
               
               Conread position:434-625
               
               
               Cow position:chr4:46068923-46069112 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:193
               
               
               Alignm identity:147
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):102, 79

               
               
               Conread position:434-631
               
               
               Cow position:chr4:64039731-64039922 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:144
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):57, 41

               
               
               Conread position:434-637
               
               
               Cow position:chr4:13142904-13142712 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:153
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):64, 0

               
               
               Conread position:434-637
               
               
               Cow position:chr4:54494459-54494657 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:156
               
               
               Alignm E-value:9e-38
               
               
               Alignm gaps (pig, cow):85, 0

               
               
               Conread position:434-640
               
               
               Cow position:chr4:3893352-3893551 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:207
               
               
               Alignm identity:160
               
               
               Alignm E-value:1e-39
               
               
               Alignm gaps (pig, cow):28, 0

               
               
               Conread position:434-641
               
               
               Cow position:chr4:7810276-7810481 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:208
               
               
               Alignm identity:144
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):115, 0

               
               
               Conread position:434-645
               
               
               Cow position:chr4:18539134-18539339 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:212
               
               
               Alignm identity:149
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):94, 0

               
               
               Conread position:434-649
               
               
               Cow position:chr4:26163353-26163138 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:217
               
               
               Alignm identity:163
               
               
               Alignm E-value:9.99995e-41
               
               
               Alignm gaps (pig, cow):110, 52

               
               
               Conread position:434-662
               
               
               Cow position:chr4:42434198-42433965 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:234
               
               
               Alignm identity:156
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):129, 0

               
               
               Conread position:434-666
               
               
               Cow position:chr4:28151150-28151378 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:234
               
               
               Alignm identity:170
               
               
               Alignm E-value:8e-36
               
               
               Alignm gaps (pig, cow):209, 77

               
               
               Conread position:434-670
               
               
               Cow position:chr4:49992706-49992940 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:240
               
               
               Alignm identity:182
               
               
               Alignm E-value:2.00386e-43
               
               
               Alignm gaps (pig, cow):68, 99

               
               
               Conread position:434-671
               
               
               Cow position:chr4:36815706-36815942 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:240
               
               
               Alignm identity:157
               
               
               Alignm E-value:5e-22
               
               
               Alignm gaps (pig, cow):119, 150

               
               
               Conread position:434-671
               
               
               Cow position:chr4:41186746-41186513 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:240
               
               
               Alignm identity:186
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):81, 77

               
               
               Conread position:434-672
               
               
               Cow position:chr4:23578571-23578795 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:240
               
               
               Alignm identity:163
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):209, 25

               
               
               Conread position:434-674
               
               
               Cow position:chr4:360525-360757 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:241
               
               
               Alignm identity:169
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):20, 0

               
               
               Conread position:434-674
               
               
               Cow position:chr4:44449967-44449730 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:243
               
               
               Alignm identity:190
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):120, 94

               
               
               Conread position:434-676
               
               
               Cow position:chr4:14754870-14754629 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:244
               
               
               Alignm identity:171
               
               
               Alignm E-value:7e-35
               
               
               Alignm gaps (pig, cow):144, 122

               
               
               Conread position:434-676
               
               
               Cow position:chr4:61450387-61450624 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:244
               
               
               Alignm identity:191
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):204, 115

               
               
               Conread position:434-686
               
               
               Cow position:chr4:47280506-47280260 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:254
               
               
               Alignm identity:185
               
               
               Alignm E-value:1e-39
               
               
               Alignm gaps (pig, cow):197, 105

               
               
               Conread position:434-689
               
               
               Cow position:chr4:25354174-25354426 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:193
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):136, 24

               
               
               Conread position:434-692
               
               
               Cow position:chr4:10041648-10041908 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:201
               
               
               Alignm E-value:9.99967e-42
               
               
               Alignm gaps (pig, cow):107, 94

               
               
               Conread position:434-693
               
               
               Cow position:chr4:32260228-32259979 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:206
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):115, 0

               
               
               Conread position:434-693
               
               
               Cow position:chr4:32838900-32838644 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:183
               
               
               Alignm E-value:1e-38
               
               
               Alignm gaps (pig, cow):79, 0

               
               
               Conread position:434-695
               
               
               Cow position:chr4:5575742-5576003 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:264
               
               
               Alignm identity:185
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):119, 134

               
               
               Conread position:434-696
               
               
               Cow position:chr4:8120541-8120285 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:264
               
               
               Alignm identity:175
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):14, 10

               
               
               Conread position:434-696
               
               
               Cow position:chr4:30220061-30219801 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:264
               
               
               Alignm identity:194
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):23, 16

               
               
               Conread position:434-696
               
               
               Cow position:chr4:31773090-31773349 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:263
               
               
               Alignm identity:187
               
               
               Alignm E-value:4.00001e-41
               
               
               Alignm gaps (pig, cow):127, 0

               
               
               Conread position:434-696
               
               
               Cow position:chr4:49667951-49667694 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:176
               
               
               Alignm E-value:6e-23
               
               
               Alignm gaps (pig, cow):87, 111

               
               
               Conread position:434-697
               
               
               Cow position:chr4:21370995-21371266 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:194
               
               
               Alignm E-value:7e-25
               
               
               Alignm gaps (pig, cow):56, 232

               
               
               Conread position:434-697
               
               
               Cow position:chr4:56852519-56852773 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:264
               
               
               Alignm identity:210
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):94, 0

               
               
               Conread position:434-698
               
               
               Cow position:chr4:13877818-13878068 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:265
               
               
               Alignm identity:191
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):95, 0

               
               
               Conread position:434-698
               
               
               Cow position:chr4:19420955-19421210 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:202
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):209, 61

               
               
               Conread position:434-698
               
               
               Cow position:chr4:57931520-57931786 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:193
               
               
               Alignm E-value:6e-34
               
               
               Alignm gaps (pig, cow):101, 154

               
               
               Conread position:434-699
               
               
               Cow position:chr4:7965029-7964778 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:191
               
               
               Alignm E-value:8e-37
               
               
               Alignm gaps (pig, cow):94, 0

               
               
               Conread position:434-699
               
               
               Cow position:chr4:8692540-8692283 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:196
               
               
               Alignm E-value:1.4013e-45
               
               
               Alignm gaps (pig, cow):94, 0

               
               
               Conread position:434-699
               
               
               Cow position:chr4:9445070-9444808 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:203
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):247, 108

               
               
               Conread position:434-699
               
               
               Cow position:chr4:10038901-10039162 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:185
               
               
               Alignm E-value:6e-34
               
               
               Alignm gaps (pig, cow):260, 22

               
               
               Conread position:434-699
               
               
               Cow position:chr4:11901941-11901685 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:210
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):90, 0

               
               
               Conread position:434-699
               
               
               Cow position:chr4:19534103-19534366 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:186
               
               
               Alignm E-value:8e-37
               
               
               Alignm gaps (pig, cow):77, 82

               
               
               Conread position:434-699
               
               
               Cow position:chr4:20562235-20562499 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:192
               
               
               Alignm E-value:6.02558e-44
               
               
               Alignm gaps (pig, cow):140, 115

               
               
               Conread position:434-699
               
               
               Cow position:chr4:24119292-24119031 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:207
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):147, 128

               
               
               Conread position:434-699
               
               
               Cow position:chr4:25879017-25879274 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:198
               
               
               Alignm E-value:5.60519e-45
               
               
               Alignm gaps (pig, cow):260, 32

               
               
               Conread position:434-699
               
               
               Cow position:chr4:35930049-35930307 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:180
               
               
               Alignm E-value:4e-30
               
               
               Alignm gaps (pig, cow):58, 0

               
               
               Conread position:434-699
               
               
               Cow position:chr4:49409084-49409347 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:208
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):116, 0

               
               
               Conread position:434-699
               
               
               Cow position:chr4:61399807-61399554 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:187
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):106, 54

               
               
               Conread position:434-699
               
               
               Cow position:chr4:62673884-62674150 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:272
               
               
               Alignm identity:189
               
               
               Alignm E-value:5e-33
               
               
               Alignm gaps (pig, cow):7, 153

               
               
               Conread position:434-701
               
               
               Cow position:chr4:26430791-26431065 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:275
               
               
               Alignm identity:180
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):121, 0

               
               
               Conread position:434-701
               
               
               Cow position:chr4:27166945-27167206 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:187
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):109, 0

               
               
               Conread position:434-701
               
               
               Cow position:chr4:43456519-43456784 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:175
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):120, 24

               
               
               Conread position:434-702
               
               
               Cow position:chr4:3475237-3475510 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:190
               
               
               Alignm E-value:9e-27
               
               
               Alignm gaps (pig, cow):106, 227

               
               
               Conread position:434-702
               
               
               Cow position:chr4:27997302-27997568 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:206
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):83, 116

               
               
               Conread position:434-703
               
               
               Cow position:chr4:17235591-17235860 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:274
               
               
               Alignm identity:193
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):20, 117

               
               
               Conread position:434-704
               
               
               Cow position:chr4:3070444-3070698 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:179
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):48, 0

               
               
               Conread position:434-704
               
               
               Cow position:chr4:10553820-10554088 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:196
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):115, 0

               
               
               Conread position:434-704
               
               
               Cow position:chr4:11930543-11930809 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:187
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):115, 0

               
               
               Conread position:434-704
               
               
               Cow position:chr4:16642391-16642655 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:184
               
               
               Alignm E-value:5e-32
               
               
               Alignm gaps (pig, cow):114, 0

               
               
               Conread position:434-704
               
               
               Cow position:chr4:17330614-17330344 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:274
               
               
               Alignm identity:192
               
               
               Alignm E-value:9e-38
               
               
               Alignm gaps (pig, cow):81, 116

               
               
               Conread position:434-704
               
               
               Cow position:chr4:17877535-17877803 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:189
               
               
               Alignm E-value:4.00001e-40
               
               
               Alignm gaps (pig, cow):115, 0

               
               
               Conread position:434-704
               
               
               Cow position:chr4:19541741-19542019 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:215
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):121, 86

               
               
               Conread position:434-704
               
               
               Cow position:chr4:60124159-60123894 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:193
               
               
               Alignm E-value:4.00001e-41
               
               
               Alignm gaps (pig, cow):115, 0

               
               
               Conread position:434-709
               
               
               Cow position:chr4:53134242-53134497 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:199
               
               
               Alignm E-value:7e-35
               
               
               Alignm gaps (pig, cow):70, 0

               
               
               Conread position:434-709
               
               
               Cow position:chr4:61066249-61066537 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:297
               
               
               Alignm identity:217
               
               
               Alignm E-value:8e-36
               
               
               Alignm gaps (pig, cow):76, 229

               
               
               Conread position:434-710
               
               
               Cow position:chr4:3850177-3850445 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:209
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):6, 0

               
               
               Conread position:434-710
               
               
               Cow position:chr4:6822096-6822354 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:186
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):242, 53

               
               
               Conread position:434-710
               
               
               Cow position:chr4:14470949-14470681 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:224
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):115, 0

               
               
               Conread position:434-710
               
               
               Cow position:chr4:18974059-18974322 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:206
               
               
               Alignm E-value:1.99965e-42
               
               
               Alignm gaps (pig, cow):263, 94

               
               
               Conread position:434-710
               
               
               Cow position:chr4:41441184-41441457 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:215
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):262, 116

               
               
               Conread position:434-710
               
               
               Cow position:chr4:58834780-58834513 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:195
               
               
               Alignm E-value:1e-38
               
               
               Alignm gaps (pig, cow):78, 0

               
               
               Conread position:434-710
               
               
               Cow position:chr4:59871124-59871374 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:205
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):103, 0

               
               
               Conread position:434-711
               
               
               Cow position:chr4:5874573-5874843 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:195
               
               
               Alignm E-value:7e-35
               
               
               Alignm gaps (pig, cow):71, 95

               
               
               Conread position:434-711
               
               
               Cow position:chr4:7501505-7501761 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:206
               
               
               Alignm E-value:9.99967e-42
               
               
               Alignm gaps (pig, cow):116, 0

               
               
               Conread position:434-711
               
               
               Cow position:chr4:46737862-46737586 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:198
               
               
               Alignm E-value:2.00386e-43
               
               
               Alignm gaps (pig, cow):264, 115

               
               
               Conread position:434-712
               
               
               Cow position:chr4:2263135-2262859 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:200
               
               
               Alignm E-value:6.02558e-44
               
               
               Alignm gaps (pig, cow):264, 116

               
               
               Conread position:434-712
               
               
               Cow position:chr4:2671646-2671381 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:200
               
               
               Alignm E-value:3e-38
               
               
               Alignm gaps (pig, cow):264, 94

               
               
               Conread position:434-712
               
               
               Cow position:chr4:5189376-5189110 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:206
               
               
               Alignm E-value:3e-38
               
               
               Alignm gaps (pig, cow):25, 95

               
               
               Conread position:434-712
               
               
               Cow position:chr4:14152692-14152979 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:205
               
               
               Alignm E-value:3e-38
               
               
               Alignm gaps (pig, cow):100, 117

               
               
               Conread position:434-712
               
               
               Cow position:chr4:15872102-15871828 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:212
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):263, 77

               
               
               Conread position:434-712
               
               
               Cow position:chr4:37553425-37553148 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:213
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):264, 115

               
               
               Conread position:434-712
               
               
               Cow position:chr4:38952178-38952443 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:212
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):201, 115

               
               
               Conread position:434-712
               
               
               Cow position:chr4:38999052-38999315 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:217
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):17, 91

               
               
               Conread position:434-712
               
               
               Cow position:chr4:39231903-39231633 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:211
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):8, 0

               
               
               Conread position:434-712
               
               
               Cow position:chr4:45235247-45234970 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:190
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):104, 94

               
               
               Conread position:434-712
               
               
               Cow position:chr4:45644694-45644417 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:218
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):145, 115

               
               
               Conread position:434-712
               
               
               Cow position:chr4:53100428-53100700 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:219
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):27, 0

               
               
               Conread position:434-712
               
               
               Cow position:chr4:53545661-53545919 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:197
               
               
               Alignm E-value:6e-24
               
               
               Alignm gaps (pig, cow):166, 66

               
               
               Conread position:434-712
               
               
               Cow position:chr4:67444764-67445040 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:203
               
               
               Alignm E-value:6.02558e-44
               
               
               Alignm gaps (pig, cow):263, 115

               
               
               Conread position:434-713
               
               
               Cow position:chr4:53832670-53832940 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:209
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):115, 0

               
               
               Conread position:434-713
               
               
               Cow position:chr4:55508800-55508522 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:286
               
               
               Alignm identity:218
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):21, 16

               
               
               Conread position:434-714
               
               
               Cow position:chr4:12003842-12004109 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:213
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):243, 116

               
               
               Conread position:434-715
               
               
               Cow position:chr4:351847-352128 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:202
               
               
               Alignm E-value:1.96182e-44
               
               
               Alignm gaps (pig, cow):259, 116

               
               
               Conread position:434-715
               
               
               Cow position:chr4:10432360-10432645 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:201
               
               
               Alignm E-value:3e-38
               
               
               Alignm gaps (pig, cow):239, 115

               
               
               Conread position:434-715
               
               
               Cow position:chr4:33433637-33433370 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:210
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):109, 0

               
               
               Conread position:434-715
               
               
               Cow position:chr4:49929818-49929555 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:189
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):274, 108

               
               
               Conread position:434-717
               
               
               Cow position:chr4:12591591-12591315 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:223
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):260, 66

               
               
               Conread position:434-717
               
               
               Cow position:chr4:17833286-17833006 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:215
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):264, 116

               
               
               Conread position:434-717
               
               
               Cow position:chr4:22850101-22849818 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:294
               
               
               Alignm identity:223
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):74, 102

               
               
               Conread position:434-717
               
               
               Cow position:chr4:23853824-23854092 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:286
               
               
               Alignm identity:220
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):100, 70

               
               
               Conread position:434-717
               
               
               Cow position:chr4:25889229-25888933 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:301
               
               
               Alignm identity:213
               
               
               Alignm E-value:7e-35
               
               
               Alignm gaps (pig, cow):108, 41

               
               
               Conread position:434-717
               
               
               Cow position:chr4:26400576-26400858 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:286
               
               
               Alignm identity:217
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):263, 115

               
               
               Conread position:434-717
               
               
               Cow position:chr4:27755686-27755404 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:213
               
               
               Alignm E-value:5.60519e-45
               
               
               Alignm gaps (pig, cow):147, 115

               
               
               Conread position:434-717
               
               
               Cow position:chr4:40576287-40576023 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:286
               
               
               Alignm identity:208
               
               
               Alignm E-value:8e-36
               
               
               Alignm gaps (pig, cow):263, 94

               
               
               Conread position:434-717
               
               
               Cow position:chr4:46274812-46275088 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:286
               
               
               Alignm identity:224
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):262, 116

               
               
               Conread position:434-717
               
               
               Cow position:chr4:46668204-46668467 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:204
               
               
               Alignm E-value:2e-34
               
               
               Alignm gaps (pig, cow):260, 62

               
               
               Conread position:434-717
               
               
               Cow position:chr4:48137536-48137807 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:216
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):262, 15

               
               
               Conread position:434-717
               
               
               Cow position:chr4:49794301-49794568 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:286
               
               
               Alignm identity:214
               
               
               Alignm E-value:1.4013e-45
               
               
               Alignm gaps (pig, cow):263, 51

               
               
               Conread position:434-717
               
               
               Cow position:chr4:51783790-51784074 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:293
               
               
               Alignm identity:216
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):80, 97

               
               
               Conread position:434-717
               
               
               Cow position:chr4:53207927-53208190 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:207
               
               
               Alignm E-value:3e-39
               
               
               Alignm gaps (pig, cow):81, 0

               
               
               Conread position:434-717
               
               
               Cow position:chr4:53208858-53209135 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:286
               
               
               Alignm identity:220
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):263, 89

               
               
               Conread position:434-717
               
               
               Cow position:chr4:53999901-53999613 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:298
               
               
               Alignm identity:225
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):142, 115

               
               
               Conread position:434-717
               
               
               Cow position:chr4:56233311-56233583 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:222
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):86, 0

               
               
               Conread position:434-717
               
               
               Cow position:chr4:57555585-57555867 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:211
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):262, 116

               
               
               Conread position:434-717
               
               
               Cow position:chr4:58248031-58248297 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:209
               
               
               Alignm E-value:9.99967e-42
               
               
               Alignm gaps (pig, cow):20, 0

               
               
               Conread position:434-717
               
               
               Cow position:chr4:67600103-67599841 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:191
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):64, 0

               
               
               Conread position:434-721
               
               
               Cow position:chr4:2609862-2610135 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:289
               
               
               Alignm identity:210
               
               
               Alignm E-value:4.00001e-41
               
               
               Alignm gaps (pig, cow):198, 32

               
               
               Conread position:435-548
               
               
               Cow position:chr4:40410735-40410622 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:114
               
               
               Alignm identity:90
               
               
               Alignm E-value:5e-22
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:435-654
               
               
               Cow position:chr4:10026117-10026324 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:220
               
               
               Alignm identity:160
               
               
               Alignm E-value:4e-30
               
               
               Alignm gaps (pig, cow):61, 0

               
               
               Conread position:435-655
               
               
               Cow position:chr4:32250070-32250271 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:222
               
               
               Alignm identity:163
               
               
               Alignm E-value:9e-27
               
               
               Alignm gaps (pig, cow):205, 109

               
               
               Conread position:435-662
               
               
               Cow position:chr4:69343337-69343560 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:228
               
               
               Alignm identity:163
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):43, 0

               
               
               Conread position:435-666
               
               
               Cow position:chr4:10034530-10034753 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:232
               
               
               Alignm identity:163
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):92, 0

               
               
               Conread position:435-686
               
               
               Cow position:chr4:43884662-43884910 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:252
               
               
               Alignm identity:170
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):114, 0

               
               
               Conread position:435-695
               
               
               Cow position:chr4:46708907-46708654 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:264
               
               
               Alignm identity:203
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):149, 89

               
               
               Conread position:435-696
               
               
               Cow position:chr4:69515498-69515248 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:262
               
               
               Alignm identity:190
               
               
               Alignm E-value:3e-38
               
               
               Alignm gaps (pig, cow):114, 0

               
               
               Conread position:435-699
               
               
               Cow position:chr4:2590956-2590692 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:188
               
               
               Alignm E-value:1e-38
               
               
               Alignm gaps (pig, cow):19, 116

               
               
               Conread position:435-699
               
               
               Cow position:chr4:22259805-22259544 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:275
               
               
               Alignm identity:194
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):88, 27

               
               
               Conread position:435-699
               
               
               Cow position:chr4:23573163-23573425 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:188
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):222, 84

               
               
               Conread position:435-699
               
               
               Cow position:chr4:59333350-59333098 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:188
               
               
               Alignm E-value:5e-33
               
               
               Alignm gaps (pig, cow):34, 90

               
               
               Conread position:435-699
               
               
               Cow position:chr4:60134930-60135194 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:189
               
               
               Alignm E-value:4.00001e-40
               
               
               Alignm gaps (pig, cow):19, 116

               
               
               Conread position:435-699
               
               
               Cow position:chr4:65816072-65815820 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:265
               
               
               Alignm identity:194
               
               
               Alignm E-value:9.99967e-42
               
               
               Alignm gaps (pig, cow):114, 0

               
               
               Conread position:435-700
               
               
               Cow position:chr4:61999832-61999575 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:198
               
               
               Alignm E-value:6.02558e-44
               
               
               Alignm gaps (pig, cow):82, 76

               
               
               Conread position:435-701
               
               
               Cow position:chr4:14737551-14737816 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:272
               
               
               Alignm identity:181
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):19, 26

               
               
               Conread position:435-701
               
               
               Cow position:chr4:23560995-23561259 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:180
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):123, 0

               
               
               Conread position:435-704
               
               
               Cow position:chr4:36899951-36900218 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:191
               
               
               Alignm E-value:1e-39
               
               
               Alignm gaps (pig, cow):16, 20

               
               
               Conread position:435-710
               
               
               Cow position:chr4:48485611-48485893 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:223
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):16, 117

               
               
               Conread position:435-711
               
               
               Cow position:chr4:65919243-65919503 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:209
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):18, 0

               
               
               Conread position:435-712
               
               
               Cow position:chr4:17175803-17176060 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:196
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):142, 69

               
               
               Conread position:435-712
               
               
               Cow position:chr4:17819181-17818905 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:189
               
               
               Alignm E-value:7e-35
               
               
               Alignm gaps (pig, cow):263, 114

               
               
               Conread position:435-712
               
               
               Cow position:chr4:19096915-19097180 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:226
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):92, 0

               
               
               Conread position:435-712
               
               
               Cow position:chr4:36490070-36489800 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:186
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):86, 0

               
               
               Conread position:435-714
               
               
               Cow position:chr4:242846-243121 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:197
               
               
               Alignm E-value:4.00001e-41
               
               
               Alignm gaps (pig, cow):114, 0

               
               
               Conread position:435-717
               
               
               Cow position:chr4:5610449-5610175 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:217
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):93, 0

               
               
               Conread position:435-717
               
               
               Cow position:chr4:65826245-65825955 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:292
               
               
               Alignm identity:222
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):110, 60

               
               
               Conread position:436-666
               
               
               Cow position:chr4:33090126-33089896 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:231
               
               
               Alignm identity:173
               
               
               Alignm E-value:1.4013e-45
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:436-699
               
               
               Cow position:chr4:27276922-27276668 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:264
               
               
               Alignm identity:202
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):213, 0

               
               
               Conread position:436-700
               
               
               Cow position:chr4:10036149-10036405 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:183
               
               
               Alignm E-value:4e-30
               
               
               Alignm gaps (pig, cow):27, 31

               
               
               Conread position:436-710
               
               
               Cow position:chr4:20090946-20090679 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:198
               
               
               Alignm E-value:3e-39
               
               
               Alignm gaps (pig, cow):261, 98

               
               
               Conread position:436-717
               
               
               Cow position:chr4:43063922-43064202 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:200
               
               
               Alignm E-value:6.02558e-44
               
               
               Alignm gaps (pig, cow):261, 113

               
               
               Conread position:437-561
               
               
               Cow position:chr4:39609218-39609341 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:125
               
               
               Alignm identity:97
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):102, 0

               
               
               Conread position:437-598
               
               
               Cow position:chr4:28740648-28740803 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:162
               
               
               Alignm identity:124
               
               
               Alignm E-value:9e-27
               
               
               Alignm gaps (pig, cow):87, 0

               
               
               Conread position:437-699
               
               
               Cow position:chr4:54571985-54571724 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:264
               
               
               Alignm identity:188
               
               
               Alignm E-value:9.99967e-42
               
               
               Alignm gaps (pig, cow):144, 112

               
               
               Conread position:437-711
               
               
               Cow position:chr4:44663101-44662828 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:194
               
               
               Alignm E-value:4.00001e-41
               
               
               Alignm gaps (pig, cow):261, 112

               
               
               Conread position:438-582
               
               
               Cow position:chr4:15813718-15813576 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:145
               
               
               Alignm identity:116
               
               
               Alignm E-value:4e-30
               
               
               Alignm gaps (pig, cow):114, 0

               
               
               Conread position:438-717
               
               
               Cow position:chr4:9795748-9795475 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:212
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):260, 112

               
               
               Conread position:438-717
               
               
               Cow position:chr4:19141918-19142188 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:215
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):72, 0

               
               
               Conread position:439-710
               
               
               Cow position:chr4:1495778-1495516 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:274
               
               
               Alignm identity:199
               
               
               Alignm E-value:9.99995e-41
               
               
               Alignm gaps (pig, cow):16, 127

               
               
               Conread position:439-710
               
               
               Cow position:chr4:14812899-14812640 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:183
               
               
               Alignm E-value:7e-25
               
               
               Alignm gaps (pig, cow):269, 67

               
               
               Conread position:439-717
               
               
               Cow position:chr4:51903225-51903500 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:219
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):76, 111

               
               
               Conread position:440-689
               
               
               Cow position:chr4:385343-385587 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:252
               
               
               Alignm identity:167
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):179, 97

               
               
               Conread position:440-724
               
               
               Cow position:chr4:8947023-8947296 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:289
               
               
               Alignm identity:214
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):97, 198

               
               
               Conread position:442-659
               
               
               Cow position:chr4:54479551-54479343 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:218
               
               
               Alignm identity:169
               
               
               Alignm E-value:4.00001e-41
               
               
               Alignm gaps (pig, cow):82, 0

               
               
               Conread position:442-717
               
               
               Cow position:chr4:23318949-23318676 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:196
               
               
               Alignm E-value:3e-39
               
               
               Alignm gaps (pig, cow):16, 9

               
               
               Conread position:442-719
               
               
               Cow position:chr4:5850709-5850426 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:167
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):13, 49

               
               
               Conread position:444-702
               
               
               Cow position:chr4:22523196-22523444 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:172
               
               
               Alignm E-value:6e-23
               
               
               Alignm gaps (pig, cow):57, 0

               
               
               Conread position:446-710
               
               
               Cow position:chr4:61191102-61191355 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:184
               
               
               Alignm E-value:8e-26
               
               
               Alignm gaps (pig, cow):9, 61

               
               
               Conread position:446-717
               
               
               Cow position:chr4:22743960-22744221 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:272
               
               
               Alignm identity:209
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):85, 0

               
               
               Conread position:450-687
               
               
               Cow position:chr4:49032246-49032476 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:239
               
               
               Alignm identity:158
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):49, 74

               
               
               Conread position:450-698
               
               
               Cow position:chr4:49698229-49698480 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:252
               
               
               Alignm identity:181
               
               
               Alignm E-value:9.99995e-41
               
               
               Alignm gaps (pig, cow):40, 0

               
               
               Conread position:450-717
               
               
               Cow position:chr4:13832985-13832708 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:286
               
               
               Alignm identity:204
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):72, 207

               
               
               Conread position:451-699
               
               
               Cow position:chr4:11225841-11225596 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:251
               
               
               Alignm identity:169
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):28, 91

               
               
               Conread position:452-667
               
               
               Cow position:chr4:41976028-41975817 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:217
               
               
               Alignm identity:160
               
               
               Alignm E-value:2e-34
               
               
               Alignm gaps (pig, cow):153, 75

               
               
               Conread position:452-701
               
               
               Cow position:chr4:40436464-40436216 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:253
               
               
               Alignm identity:169
               
               
               Alignm E-value:7e-25
               
               
               Alignm gaps (pig, cow):114, 90

               
               
               Conread position:452-702
               
               
               Cow position:chr4:44665732-44665482 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:253
               
               
               Alignm identity:182
               
               
               Alignm E-value:1e-39
               
               
               Alignm gaps (pig, cow):76, 66

               
               
               Conread position:452-712
               
               
               Cow position:chr4:55954964-55955213 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:261
               
               
               Alignm identity:184
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):97, 0

               
               
               Conread position:452-717
               
               
               Cow position:chr4:3990985-3990727 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:204
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):196, 97

               
               
               Conread position:453-583
               
               
               Cow position:chr4:5231630-5231758 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:131
               
               
               Alignm identity:102
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):96, 0

               
               
               Conread position:453-590
               
               
               Cow position:chr4:31484118-31483984 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:138
               
               
               Alignm identity:107
               
               
               Alignm E-value:6e-24
               
               
               Alignm gaps (pig, cow):96, 0

               
               
               Conread position:453-607
               
               
               Cow position:chr4:57667797-57667947 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:155
               
               
               Alignm identity:114
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):96, 0

               
               
               Conread position:453-613
               
               
               Cow position:chr4:44049824-44049978 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:161
               
               
               Alignm identity:122
               
               
               Alignm E-value:8e-26
               
               
               Alignm gaps (pig, cow):75, 0

               
               
               Conread position:453-619
               
               
               Cow position:chr4:22631942-22631778 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:167
               
               
               Alignm identity:125
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):96, 0

               
               
               Conread position:453-621
               
               
               Cow position:chr4:11929057-11928895 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:169
               
               
               Alignm identity:121
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):75, 0

               
               
               Conread position:453-630
               
               
               Cow position:chr4:64594-64421 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:179
               
               
               Alignm identity:136
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):79, 45

               
               
               Conread position:453-632
               
               
               Cow position:chr4:33146454-33146631 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:180
               
               
               Alignm identity:129
               
               
               Alignm E-value:8e-26
               
               
               Alignm gaps (pig, cow):96, 0

               
               
               Conread position:453-648
               
               
               Cow position:chr4:13668975-13668787 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:196
               
               
               Alignm identity:152
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):78, 0

               
               
               Conread position:453-648
               
               
               Cow position:chr4:59056201-59056013 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:196
               
               
               Alignm identity:159
               
               
               Alignm E-value:2.00386e-43
               
               
               Alignm gaps (pig, cow):96, 0

               
               
               Conread position:453-649
               
               
               Cow position:chr4:21873836-21874033 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:145
               
               
               Alignm E-value:4e-31
               
               
               Alignm gaps (pig, cow):80, 92

               
               
               Conread position:453-658
               
               
               Cow position:chr4:64661672-64661467 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:208
               
               
               Alignm identity:151
               
               
               Alignm E-value:5e-32
               
               
               Alignm gaps (pig, cow):112, 97

               
               
               Conread position:453-672
               
               
               Cow position:chr4:49559672-49559455 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:220
               
               
               Alignm identity:159
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):96, 0

               
               
               Conread position:453-683
               
               
               Cow position:chr4:20117209-20116992 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:231
               
               
               Alignm identity:180
               
               
               Alignm E-value:5.00264e-43
               
               
               Alignm gaps (pig, cow):39, 0

               
               
               Conread position:453-684
               
               
               Cow position:chr4:16239501-16239274 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:237
               
               
               Alignm identity:170
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):88, 58

               
               
               Conread position:453-690
               
               
               Cow position:chr4:59118516-59118273 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:245
               
               
               Alignm identity:189
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):92, 168

               
               
               Conread position:453-691
               
               
               Cow position:chr4:51960652-51960415 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:241
               
               
               Alignm identity:160
               
               
               Alignm E-value:6e-24
               
               
               Alignm gaps (pig, cow):164, 50

               
               
               Conread position:453-696
               
               
               Cow position:chr4:29834218-29834459 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:244
               
               
               Alignm identity:176
               
               
               Alignm E-value:4.00001e-40
               
               
               Alignm gaps (pig, cow):96, 0

               
               
               Conread position:453-696
               
               
               Cow position:chr4:42928388-42928625 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:246
               
               
               Alignm identity:171
               
               
               Alignm E-value:3e-28
               
               
               Alignm gaps (pig, cow):129, 75

               
               
               Conread position:453-696
               
               
               Cow position:chr4:43233659-43233418 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:244
               
               
               Alignm identity:170
               
               
               Alignm E-value:7e-35
               
               
               Alignm gaps (pig, cow):89, 0

               
               
               Conread position:453-698
               
               
               Cow position:chr4:7860-7621 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:246
               
               
               Alignm identity:189
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):103, 0

               
               
               Conread position:453-699
               
               
               Cow position:chr4:5441065-5440821 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:247
               
               
               Alignm identity:179
               
               
               Alignm E-value:9.99967e-42
               
               
               Alignm gaps (pig, cow):96, 0

               
               
               Conread position:453-699
               
               
               Cow position:chr4:12700717-12700465 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:255
               
               
               Alignm identity:190
               
               
               Alignm E-value:1.99965e-42
               
               
               Alignm gaps (pig, cow):31, 202

               
               
               Conread position:453-699
               
               
               Cow position:chr4:17032905-17032661 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:247
               
               
               Alignm identity:180
               
               
               Alignm E-value:1.99965e-42
               
               
               Alignm gaps (pig, cow):96, 0

               
               
               Conread position:453-699
               
               
               Cow position:chr4:17091364-17091124 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:247
               
               
               Alignm identity:174
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):96, 0

               
               
               Conread position:453-699
               
               
               Cow position:chr4:20290678-20290902 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:247
               
               
               Alignm identity:172
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):43, 0

               
               
               Conread position:453-699
               
               
               Cow position:chr4:28138195-28137954 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:247
               
               
               Alignm identity:163
               
               
               Alignm E-value:6e-24
               
               
               Alignm gaps (pig, cow):36, 0

               
               
               Conread position:453-699
               
               
               Cow position:chr4:35144888-35145131 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:247
               
               
               Alignm identity:177
               
               
               Alignm E-value:1e-38
               
               
               Alignm gaps (pig, cow):87, 0

               
               
               Conread position:453-699
               
               
               Cow position:chr4:40218414-40218654 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:247
               
               
               Alignm identity:177
               
               
               Alignm E-value:8e-37
               
               
               Alignm gaps (pig, cow):96, 0

               
               
               Conread position:453-699
               
               
               Cow position:chr4:43752810-43753059 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:253
               
               
               Alignm identity:176
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):104, 81

               
               
               Conread position:453-699
               
               
               Cow position:chr4:46253880-46253636 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:247
               
               
               Alignm identity:177
               
               
               Alignm E-value:1e-39
               
               
               Alignm gaps (pig, cow):96, 0

               
               
               Conread position:453-699
               
               
               Cow position:chr4:47116897-47117141 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:248
               
               
               Alignm identity:182
               
               
               Alignm E-value:4.99983e-42
               
               
               Alignm gaps (pig, cow):58, 62

               
               
               Conread position:453-699
               
               
               Cow position:chr4:54812138-54812384 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:249
               
               
               Alignm identity:169
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):208, 96

               
               
               Conread position:453-699
               
               
               Cow position:chr4:56479631-56479875 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:247
               
               
               Alignm identity:174
               
               
               Alignm E-value:8e-37
               
               
               Alignm gaps (pig, cow):96, 0

               
               
               Conread position:453-699
               
               
               Cow position:chr4:61271991-61271753 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:247
               
               
               Alignm identity:179
               
               
               Alignm E-value:9e-38
               
               
               Alignm gaps (pig, cow):83, 0

               
               
               Conread position:453-699
               
               
               Cow position:chr4:61816808-61816560 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:250
               
               
               Alignm identity:172
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):89, 236

               
               
               Conread position:453-699
               
               
               Cow position:chr4:63266436-63266680 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:247
               
               
               Alignm identity:174
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):97, 0

               
               
               Conread position:453-699
               
               
               Cow position:chr4:66256325-66256560 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:250
               
               
               Alignm identity:175
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):117, 32

               
               
               Conread position:453-699
               
               
               Cow position:chr4:67394838-67395082 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:247
               
               
               Alignm identity:169
               
               
               Alignm E-value:5e-32
               
               
               Alignm gaps (pig, cow):96, 0

               
               
               Conread position:453-700
               
               
               Cow position:chr4:44635161-44635406 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:248
               
               
               Alignm identity:172
               
               
               Alignm E-value:2e-34
               
               
               Alignm gaps (pig, cow):103, 0

               
               
               Conread position:453-701
               
               
               Cow position:chr4:41897076-41896833 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:249
               
               
               Alignm identity:175
               
               
               Alignm E-value:7e-35
               
               
               Alignm gaps (pig, cow):96, 0

               
               
               Conread position:453-701
               
               
               Cow position:chr4:62223949-62224184 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:249
               
               
               Alignm identity:176
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):58, 0

               
               
               Conread position:453-702
               
               
               Cow position:chr4:11100025-11099788 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:250
               
               
               Alignm identity:188
               
               
               Alignm E-value:9.99967e-42
               
               
               Alignm gaps (pig, cow):11, 0

               
               
               Conread position:453-702
               
               
               Cow position:chr4:24187999-24187733 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:187
               
               
               Alignm E-value:4e-31
               
               
               Alignm gaps (pig, cow):93, 0

               
               
               Conread position:453-704
               
               
               Cow position:chr4:12557851-12557605 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:252
               
               
               Alignm identity:176
               
               
               Alignm E-value:6e-34
               
               
               Alignm gaps (pig, cow):96, 0

               
               
               Conread position:453-704
               
               
               Cow position:chr4:23309285-23309040 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:255
               
               
               Alignm identity:174
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):227, 49

               
               
               Conread position:453-704
               
               
               Cow position:chr4:44777595-44777345 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:253
               
               
               Alignm identity:177
               
               
               Alignm E-value:8e-36
               
               
               Alignm gaps (pig, cow):245, 96

               
               
               Conread position:453-709
               
               
               Cow position:chr4:41639913-41640168 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:258
               
               
               Alignm identity:179
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):245, 96

               
               
               Conread position:453-710
               
               
               Cow position:chr4:18489754-18489498 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:186
               
               
               Alignm E-value:1e-39
               
               
               Alignm gaps (pig, cow):89, 23

               
               
               Conread position:453-710
               
               
               Cow position:chr4:45918671-45918925 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:185
               
               
               Alignm E-value:9e-38
               
               
               Alignm gaps (pig, cow):171, 85

               
               
               Conread position:453-710
               
               
               Cow position:chr4:61721248-61720983 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:186
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):52, 138

               
               
               Conread position:453-711
               
               
               Cow position:chr4:12426906-12426649 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:187
               
               
               Alignm E-value:4.99983e-42
               
               
               Alignm gaps (pig, cow):245, 96

               
               
               Conread position:453-711
               
               
               Cow position:chr4:40664061-40663804 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:185
               
               
               Alignm E-value:4.00001e-40
               
               
               Alignm gaps (pig, cow):245, 96

               
               
               Conread position:453-711
               
               
               Cow position:chr4:42399621-42399364 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:185
               
               
               Alignm E-value:4.00001e-40
               
               
               Alignm gaps (pig, cow):245, 96

               
               
               Conread position:453-711
               
               
               Cow position:chr4:43086434-43086177 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:188
               
               
               Alignm E-value:5.00264e-43
               
               
               Alignm gaps (pig, cow):245, 96

               
               
               Conread position:453-711
               
               
               Cow position:chr4:44051867-44052124 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:183
               
               
               Alignm E-value:3e-38
               
               
               Alignm gaps (pig, cow):245, 96

               
               
               Conread position:453-711
               
               
               Cow position:chr4:59781332-59781589 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:187
               
               
               Alignm E-value:4.99983e-42
               
               
               Alignm gaps (pig, cow):245, 96

               
               
               Conread position:453-712
               
               
               Cow position:chr4:9166090-9165837 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:265
               
               
               Alignm identity:182
               
               
               Alignm E-value:9e-27
               
               
               Alignm gaps (pig, cow):161, 71

               
               
               Conread position:453-712
               
               
               Cow position:chr4:11922808-11922545 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:187
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):89, 46

               
               
               Conread position:453-712
               
               
               Cow position:chr4:17112240-17111986 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:261
               
               
               Alignm identity:209
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):90, 105

               
               
               Conread position:453-712
               
               
               Cow position:chr4:29569178-29568920 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:261
               
               
               Alignm identity:182
               
               
               Alignm E-value:8e-37
               
               
               Alignm gaps (pig, cow):245, 96

               
               
               Conread position:453-712
               
               
               Cow position:chr4:58283459-58283203 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:261
               
               
               Alignm identity:191
               
               
               Alignm E-value:6.02558e-44
               
               
               Alignm gaps (pig, cow):245, 89

               
               
               Conread position:453-712
               
               
               Cow position:chr4:62471706-62471963 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:210
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):97, 0

               
               
               Conread position:453-712
               
               
               Cow position:chr4:63431067-63431325 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:261
               
               
               Alignm identity:186
               
               
               Alignm E-value:9.99995e-41
               
               
               Alignm gaps (pig, cow):245, 96

               
               
               Conread position:453-712
               
               
               Cow position:chr4:65168367-65168114 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:201
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):87, 0

               
               
               Conread position:453-717
               
               
               Cow position:chr4:26469283-26469542 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:205
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):126, 26

               
               
               Conread position:453-717
               
               
               Cow position:chr4:33366590-33366331 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:188
               
               
               Alignm E-value:9e-38
               
               
               Alignm gaps (pig, cow):244, 71

               
               
               Conread position:453-717
               
               
               Cow position:chr4:65891640-65891888 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:185
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):243, 43

               
               
               Conread position:454-687
               
               
               Cow position:chr4:1535448-1535679 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:235
               
               
               Alignm identity:155
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):115, 98

               
               
               Conread position:454-699
               
               
               Cow position:chr4:65193124-65193382 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:261
               
               
               Alignm identity:179
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):7, 96

               
               
               Conread position:455-709
               
               
               Cow position:chr4:29710402-29710146 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:261
               
               
               Alignm identity:186
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):86, 201

               
               
               Conread position:455-712
               
               
               Cow position:chr4:14944680-14944950 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:274
               
               
               Alignm identity:188
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):98, 35

               
               
               Conread position:455-717
               
               
               Cow position:chr4:24372211-24371956 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:264
               
               
               Alignm identity:194
               
               
               Alignm E-value:2.00386e-43
               
               
               Alignm gaps (pig, cow):244, 97

               
               
               Conread position:456-571
               
               
               Cow position:chr4:28173275-28173162 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:116
               
               
               Alignm identity:93
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):93, 0

               
               
               Conread position:456-582
               
               
               Cow position:chr4:55656944-55656820 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:127
               
               
               Alignm identity:102
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):93, 0

               
               
               Conread position:456-614
               
               
               Cow position:chr4:68796300-68796457 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:160
               
               
               Alignm identity:121
               
               
               Alignm E-value:9e-27
               
               
               Alignm gaps (pig, cow):40, 94

               
               
               Conread position:456-633
               
               
               Cow position:chr4:22906681-22906854 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:178
               
               
               Alignm identity:148
               
               
               Alignm E-value:6.02558e-44
               
               
               Alignm gaps (pig, cow):93, 0

               
               
               Conread position:456-645
               
               
               Cow position:chr4:38973955-38974141 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:190
               
               
               Alignm identity:140
               
               
               Alignm E-value:4e-31
               
               
               Alignm gaps (pig, cow):10, 0

               
               
               Conread position:456-651
               
               
               Cow position:chr4:7704668-7704482 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:196
               
               
               Alignm identity:140
               
               
               Alignm E-value:7e-25
               
               
               Alignm gaps (pig, cow):157, 0

               
               
               Conread position:456-652
               
               
               Cow position:chr4:23892389-23892580 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:197
               
               
               Alignm identity:136
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):71, 0

               
               
               Conread position:456-661
               
               
               Cow position:chr4:5161352-5161153 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:206
               
               
               Alignm identity:142
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):72, 0

               
               
               Conread position:456-671
               
               
               Cow position:chr4:46492542-46492747 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:217
               
               
               Alignm identity:157
               
               
               Alignm E-value:3e-28
               
               
               Alignm gaps (pig, cow):213, 84

               
               
               Conread position:456-675
               
               
               Cow position:chr4:22023501-22023278 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:224
               
               
               Alignm identity:166
               
               
               Alignm E-value:1e-38
               
               
               Alignm gaps (pig, cow):104, 0

               
               
               Conread position:456-676
               
               
               Cow position:chr4:54171009-54171222 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:221
               
               
               Alignm identity:168
               
               
               Alignm E-value:9.99995e-41
               
               
               Alignm gaps (pig, cow):94, 0

               
               
               Conread position:456-691
               
               
               Cow position:chr4:68470608-68470376 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:236
               
               
               Alignm identity:170
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):93, 0

               
               
               Conread position:456-697
               
               
               Cow position:chr4:3388189-3388420 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:244
               
               
               Alignm identity:191
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):97, 128

               
               
               Conread position:456-697
               
               
               Cow position:chr4:59884640-59884408 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:243
               
               
               Alignm identity:169
               
               
               Alignm E-value:9e-27
               
               
               Alignm gaps (pig, cow):55, 59

               
               
               Conread position:456-697
               
               
               Cow position:chr4:61215356-61215126 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:243
               
               
               Alignm identity:176
               
               
               Alignm E-value:5e-33
               
               
               Alignm gaps (pig, cow):33, 52

               
               
               Conread position:456-698
               
               
               Cow position:chr4:10037054-10037291 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:243
               
               
               Alignm identity:166
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):23, 0

               
               
               Conread position:456-699
               
               
               Cow position:chr4:19313646-19313885 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:244
               
               
               Alignm identity:184
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):85, 0

               
               
               Conread position:456-699
               
               
               Cow position:chr4:21602845-21602601 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:247
               
               
               Alignm identity:174
               
               
               Alignm E-value:2e-34
               
               
               Alignm gaps (pig, cow):195, 93

               
               
               Conread position:456-699
               
               
               Cow position:chr4:23554893-23555132 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:244
               
               
               Alignm identity:175
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):62, 0

               
               
               Conread position:456-699
               
               
               Cow position:chr4:23563641-23563878 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:244
               
               
               Alignm identity:164
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):44, 0

               
               
               Conread position:456-699
               
               
               Cow position:chr4:28836170-28836408 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:247
               
               
               Alignm identity:187
               
               
               Alignm E-value:5.00264e-43
               
               
               Alignm gaps (pig, cow):16, 97

               
               
               Conread position:456-699
               
               
               Cow position:chr4:30541760-30542001 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:244
               
               
               Alignm identity:174
               
               
               Alignm E-value:3e-38
               
               
               Alignm gaps (pig, cow):93, 0

               
               
               Conread position:456-699
               
               
               Cow position:chr4:45113792-45113551 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:244
               
               
               Alignm identity:174
               
               
               Alignm E-value:1e-38
               
               
               Alignm gaps (pig, cow):86, 0

               
               
               Conread position:456-699
               
               
               Cow position:chr4:48119032-48118786 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:248
               
               
               Alignm identity:163
               
               
               Alignm E-value:6e-23
               
               
               Alignm gaps (pig, cow):83, 160

               
               
               Conread position:456-699
               
               
               Cow position:chr4:51289357-51289599 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:249
               
               
               Alignm identity:176
               
               
               Alignm E-value:4e-31
               
               
               Alignm gaps (pig, cow):192, 71

               
               
               Conread position:456-699
               
               
               Cow position:chr4:58577068-58576827 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:244
               
               
               Alignm identity:175
               
               
               Alignm E-value:3e-39
               
               
               Alignm gaps (pig, cow):93, 0

               
               
               Conread position:456-700
               
               
               Cow position:chr4:36071023-36071263 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:245
               
               
               Alignm identity:164
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):98, 0

               
               
               Conread position:456-701
               
               
               Cow position:chr4:9389714-9389477 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:247
               
               
               Alignm identity:164
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):16, 73

               
               
               Conread position:456-701
               
               
               Cow position:chr4:63467230-63466997 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:246
               
               
               Alignm identity:166
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):44, 0

               
               
               Conread position:456-702
               
               
               Cow position:chr4:1915934-1915697 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:247
               
               
               Alignm identity:196
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):83, 0

               
               
               Conread position:456-702
               
               
               Cow position:chr4:46711007-46710763 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:248
               
               
               Alignm identity:181
               
               
               Alignm E-value:4.00001e-41
               
               
               Alignm gaps (pig, cow):242, 93

               
               
               Conread position:456-703
               
               
               Cow position:chr4:57988320-57988565 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:249
               
               
               Alignm identity:178
               
               
               Alignm E-value:9e-38
               
               
               Alignm gaps (pig, cow):150, 93

               
               
               Conread position:456-704
               
               
               Cow position:chr4:608813-609056 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:249
               
               
               Alignm identity:165
               
               
               Alignm E-value:8e-26
               
               
               Alignm gaps (pig, cow):45, 0

               
               
               Conread position:456-704
               
               
               Cow position:chr4:33069243-33068998 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:249
               
               
               Alignm identity:185
               
               
               Alignm E-value:1.4013e-45
               
               
               Alignm gaps (pig, cow):87, 0

               
               
               Conread position:456-704
               
               
               Cow position:chr4:52771283-52771528 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:249
               
               
               Alignm identity:182
               
               
               Alignm E-value:2.00386e-43
               
               
               Alignm gaps (pig, cow):94, 0

               
               
               Conread position:456-704
               
               
               Cow position:chr4:60907653-60907407 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:249
               
               
               Alignm identity:179
               
               
               Alignm E-value:9.99995e-41
               
               
               Alignm gaps (pig, cow):93, 0

               
               
               Conread position:456-710
               
               
               Cow position:chr4:65406714-65406469 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:256
               
               
               Alignm identity:192
               
               
               Alignm E-value:1.99965e-42
               
               
               Alignm gaps (pig, cow):167, 17

               
               
               Conread position:456-711
               
               
               Cow position:chr4:42232310-42232548 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:258
               
               
               Alignm identity:189
               
               
               Alignm E-value:7e-35
               
               
               Alignm gaps (pig, cow):164, 8

               
               
               Conread position:456-711
               
               
               Cow position:chr4:47056666-47056920 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:183
               
               
               Alignm E-value:1e-39
               
               
               Alignm gaps (pig, cow):242, 93

               
               
               Conread position:456-712
               
               
               Cow position:chr4:30973982-30974231 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:191
               
               
               Alignm E-value:1.96182e-44
               
               
               Alignm gaps (pig, cow):32, 0

               
               
               Conread position:456-712
               
               
               Cow position:chr4:50860418-50860163 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:258
               
               
               Alignm identity:182
               
               
               Alignm E-value:3e-38
               
               
               Alignm gaps (pig, cow):242, 93

               
               
               Conread position:456-712
               
               
               Cow position:chr4:68233630-68233865 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:182
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):42, 0

               
               
               Conread position:456-717
               
               
               Cow position:chr4:480366-480109 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:262
               
               
               Alignm identity:210
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):94, 0

               
               
               Conread position:456-717
               
               
               Cow position:chr4:2190703-2190443 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:263
               
               
               Alignm identity:190
               
               
               Alignm E-value:2.00386e-43
               
               
               Alignm gaps (pig, cow):242, 93

               
               
               Conread position:456-717
               
               
               Cow position:chr4:11671095-11671350 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:262
               
               
               Alignm identity:205
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):61, 0

               
               
               Conread position:456-717
               
               
               Cow position:chr4:17474063-17474335 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:202
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):70, 113

               
               
               Conread position:456-717
               
               
               Cow position:chr4:21943109-21942848 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:265
               
               
               Alignm identity:184
               
               
               Alignm E-value:6e-34
               
               
               Alignm gaps (pig, cow):227, 93

               
               
               Conread position:456-717
               
               
               Cow position:chr4:29813892-29813643 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:265
               
               
               Alignm identity:213
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):240, 144

               
               
               Conread position:457-645
               
               
               Cow position:chr4:23866315-23866134 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:133
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):64, 0

               
               
               Conread position:457-658
               
               
               Cow position:chr4:68429732-68429927 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:202
               
               
               Alignm identity:142
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):8, 0

               
               
               Conread position:457-693
               
               
               Cow position:chr4:62406803-62407029 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:237
               
               
               Alignm identity:164
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):46, 0

               
               
               Conread position:457-699
               
               
               Cow position:chr4:23567778-23568019 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:244
               
               
               Alignm identity:175
               
               
               Alignm E-value:1e-38
               
               
               Alignm gaps (pig, cow):194, 93

               
               
               Conread position:457-699
               
               
               Cow position:chr4:30814719-30814954 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:244
               
               
               Alignm identity:168
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):160, 84

               
               
               Conread position:457-699
               
               
               Cow position:chr4:49001659-49001419 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:243
               
               
               Alignm identity:172
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):93, 0

               
               
               Conread position:457-701
               
               
               Cow position:chr4:21985542-21985781 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:245
               
               
               Alignm identity:162
               
               
               Alignm E-value:6e-24
               
               
               Alignm gaps (pig, cow):85, 0

               
               
               Conread position:457-710
               
               
               Cow position:chr4:4085487-4085246 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:256
               
               
               Alignm identity:202
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):48, 35

               
               
               Conread position:457-711
               
               
               Cow position:chr4:23647200-23646952 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:256
               
               
               Alignm identity:205
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):244, 21

               
               
               Conread position:457-712
               
               
               Cow position:chr4:24744773-24744518 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:258
               
               
               Alignm identity:206
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):192, 162

               
               
               Conread position:458-645
               
               
               Cow position:chr4:16814127-16813945 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:188
               
               
               Alignm identity:142
               
               
               Alignm E-value:5e-33
               
               
               Alignm gaps (pig, cow):70, 0

               
               
               Conread position:458-699
               
               
               Cow position:chr4:11187102-11187331 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:244
               
               
               Alignm identity:188
               
               
               Alignm E-value:9.99967e-42
               
               
               Alignm gaps (pig, cow):117, 40

               
               
               Conread position:458-699
               
               
               Cow position:chr4:33935363-33935602 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:242
               
               
               Alignm identity:179
               
               
               Alignm E-value:1.96182e-44
               
               
               Alignm gaps (pig, cow):94, 0

               
               
               Conread position:458-704
               
               
               Cow position:chr4:12657897-12658139 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:247
               
               
               Alignm identity:175
               
               
               Alignm E-value:8e-36
               
               
               Alignm gaps (pig, cow):91, 0

               
               
               Conread position:458-704
               
               
               Cow position:chr4:17919143-17918900 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:247
               
               
               Alignm identity:176
               
               
               Alignm E-value:9e-38
               
               
               Alignm gaps (pig, cow):10, 0

               
               
               Conread position:458-711
               
               
               Cow position:chr4:15862701-15862449 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:255
               
               
               Alignm identity:180
               
               
               Alignm E-value:9e-38
               
               
               Alignm gaps (pig, cow):240, 91

               
               
               Conread position:458-711
               
               
               Cow position:chr4:34996817-34997069 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:255
               
               
               Alignm identity:180
               
               
               Alignm E-value:9e-38
               
               
               Alignm gaps (pig, cow):240, 91

               
               
               Conread position:458-712
               
               
               Cow position:chr4:45653861-45653587 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:190
               
               
               Alignm E-value:6e-23
               
               
               Alignm gaps (pig, cow):73, 255

               
               
               Conread position:458-717
               
               
               Cow position:chr4:15904744-15904994 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:197
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):70, 0

               
               
               Conread position:458-719
               
               
               Cow position:chr4:10024935-10025181 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:262
               
               
               Alignm identity:187
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):32, 0

               
               
               Conread position:459-586
               
               
               Cow position:chr4:6459921-6459797 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:128
               
               
               Alignm identity:99
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):90, 0

               
               
               Conread position:459-702
               
               
               Cow position:chr4:45078489-45078252 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:244
               
               
               Alignm identity:161
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):65, 0

               
               
               Conread position:459-713
               
               
               Cow position:chr4:64986348-64986599 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:169
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):228, 75

               
               
               Conread position:460-697
               
               
               Cow position:chr4:38945700-38945921 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:238
               
               
               Alignm identity:184
               
               
               Alignm E-value:2.00386e-43
               
               
               Alignm gaps (pig, cow):45, 0

               
               
               Conread position:460-699
               
               
               Cow position:chr4:53763470-53763240 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:241
               
               
               Alignm identity:184
               
               
               Alignm E-value:6.02558e-44
               
               
               Alignm gaps (pig, cow):120, 64

               
               
               Conread position:461-666
               
               
               Cow position:chr4:23553547-23553747 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:206
               
               
               Alignm identity:149
               
               
               Alignm E-value:4e-30
               
               
               Alignm gaps (pig, cow):58, 0

               
               
               Conread position:461-696
               
               
               Cow position:chr4:4277512-4277280 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:236
               
               
               Alignm identity:167
               
               
               Alignm E-value:2e-34
               
               
               Alignm gaps (pig, cow):5, 0

               
               
               Conread position:461-701
               
               
               Cow position:chr4:68941803-68941568 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:241
               
               
               Alignm identity:171
               
               
               Alignm E-value:6e-34
               
               
               Alignm gaps (pig, cow):89, 0

               
               
               Conread position:461-712
               
               
               Cow position:chr4:21064679-21064927 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:256
               
               
               Alignm identity:203
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):83, 123

               
               
               Conread position:462-699
               
               
               Cow position:chr4:47502108-47502343 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:238
               
               
               Alignm identity:171
               
               
               Alignm E-value:1e-38
               
               
               Alignm gaps (pig, cow):88, 0

               
               
               Conread position:462-701
               
               
               Cow position:chr4:10996494-10996257 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:241
               
               
               Alignm identity:168
               
               
               Alignm E-value:5e-32
               
               
               Alignm gaps (pig, cow):189, 87

               
               
               Conread position:462-712
               
               
               Cow position:chr4:14927605-14927852 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:175
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):91, 139

               
               
               Conread position:463-612
               
               
               Cow position:chr4:2681016-2681160 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:150
               
               
               Alignm identity:117
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):65, 0

               
               
               Conread position:463-644
               
               
               Cow position:chr4:1499497-1499320 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:183
               
               
               Alignm identity:142
               
               
               Alignm E-value:6e-34
               
               
               Alignm gaps (pig, cow):154, 48

               
               
               Conread position:463-673
               
               
               Cow position:chr4:25917837-25917629 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:211
               
               
               Alignm identity:152
               
               
               Alignm E-value:5e-33
               
               
               Alignm gaps (pig, cow):86, 0

               
               
               Conread position:463-696
               
               
               Cow position:chr4:15255975-15255744 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:234
               
               
               Alignm identity:167
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):86, 0

               
               
               Conread position:463-711
               
               
               Cow position:chr4:15256403-15256153 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:252
               
               
               Alignm identity:178
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):107, 86

               
               
               Conread position:463-711
               
               
               Cow position:chr4:22216008-22215762 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:249
               
               
               Alignm identity:203
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):85, 0

               
               
               Conread position:463-711
               
               
               Cow position:chr4:45375033-45375282 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:252
               
               
               Alignm identity:172
               
               
               Alignm E-value:4e-30
               
               
               Alignm gaps (pig, cow):219, 99

               
               
               Conread position:463-717
               
               
               Cow position:chr4:6653389-6653625 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:256
               
               
               Alignm identity:185
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):205, 11

               
               
               Conread position:464-604
               
               
               Cow position:chr4:6413589-6413454 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:141
               
               
               Alignm identity:111
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):64, 0

               
               
               Conread position:464-663
               
               
               Cow position:chr4:26704522-26704325 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:200
               
               
               Alignm identity:142
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):78, 0

               
               
               Conread position:464-695
               
               
               Cow position:chr4:24371078-24370848 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:233
               
               
               Alignm identity:170
               
               
               Alignm E-value:3e-39
               
               
               Alignm gaps (pig, cow):68, 86

               
               
               Conread position:464-712
               
               
               Cow position:chr4:44030020-44029777 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:250
               
               
               Alignm identity:181
               
               
               Alignm E-value:9e-38
               
               
               Alignm gaps (pig, cow):234, 85

               
               
               Conread position:466-626
               
               
               Cow position:chr4:17186868-17186713 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:161
               
               
               Alignm identity:131
               
               
               Alignm E-value:7e-35
               
               
               Alignm gaps (pig, cow):32, 0

               
               
               Conread position:466-683
               
               
               Cow position:chr4:10905805-10905597 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:218
               
               
               Alignm identity:170
               
               
               Alignm E-value:1.99965e-42
               
               
               Alignm gaps (pig, cow):26, 0

               
               
               Conread position:466-699
               
               
               Cow position:chr4:19265224-19265454 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:234
               
               
               Alignm identity:183
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):84, 0

               
               
               Conread position:466-702
               
               
               Cow position:chr4:60897622-60897395 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:237
               
               
               Alignm identity:188
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):84, 0

               
               
               Conread position:466-712
               
               
               Cow position:chr4:12697295-12697534 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:253
               
               
               Alignm identity:185
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):77, 55

               
               
               Conread position:468-649
               
               
               Cow position:chr4:44263129-44263308 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:183
               
               
               Alignm identity:131
               
               
               Alignm E-value:7e-25
               
               
               Alignm gaps (pig, cow):67, 56

               
               
               Conread position:469-649
               
               
               Cow position:chr4:33149489-33149670 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:131
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):72, 0

               
               
               Conread position:469-685
               
               
               Cow position:chr4:31023100-31023309 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:217
               
               
               Alignm identity:176
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):41, 0

               
               
               Conread position:469-704
               
               
               Cow position:chr4:49204013-49203787 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:236
               
               
               Alignm identity:170
               
               
               Alignm E-value:5e-32
               
               
               Alignm gaps (pig, cow):32, 0

               
               
               Conread position:469-709
               
               
               Cow position:chr4:42424146-42423910 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:241
               
               
               Alignm identity:194
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):29, 0

               
               
               Conread position:469-711
               
               
               Cow position:chr4:44782028-44782263 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:243
               
               
               Alignm identity:189
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):88, 0

               
               
               Conread position:469-717
               
               
               Cow position:chr4:65731273-65731022 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:261
               
               
               Alignm identity:187
               
               
               Alignm E-value:4e-31
               
               
               Alignm gaps (pig, cow):119, 59

               
               
               Conread position:470-701
               
               
               Cow position:chr4:56240191-56239970 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:234
               
               
               Alignm identity:184
               
               
               Alignm E-value:1.96182e-44
               
               
               Alignm gaps (pig, cow):88, 58

               
               
               Conread position:471-699
               
               
               Cow position:chr4:37470210-37470431 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:229
               
               
               Alignm identity:167
               
               
               Alignm E-value:2e-34
               
               
               Alignm gaps (pig, cow):52, 0

               
               
               Conread position:471-700
               
               
               Cow position:chr4:54972297-54972530 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:238
               
               
               Alignm identity:165
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):113, 78

               
               
               Conread position:471-717
               
               
               Cow position:chr4:45577-45816 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:247
               
               
               Alignm identity:181
               
               
               Alignm E-value:4.00001e-40
               
               
               Alignm gaps (pig, cow):57, 0

               
               
               Conread position:471-720
               
               
               Cow position:chr4:10916181-10915938 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:251
               
               
               Alignm identity:193
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):187, 78

               
               
               Conread position:473-630
               
               
               Cow position:chr4:54111214-54111364 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:158
               
               
               Alignm identity:131
               
               
               Alignm E-value:7e-35
               
               
               Alignm gaps (pig, cow):55, 0

               
               
               Conread position:473-690
               
               
               Cow position:chr4:52979712-52979498 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:218
               
               
               Alignm identity:158
               
               
               Alignm E-value:7e-35
               
               
               Alignm gaps (pig, cow):77, 0

               
               
               Conread position:473-717
               
               
               Cow position:chr4:68076870-68076633 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:246
               
               
               Alignm identity:181
               
               
               Alignm E-value:1e-38
               
               
               Alignm gaps (pig, cow):224, 76

               
               
               Conread position:474-699
               
               
               Cow position:chr4:30997613-30997840 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:231
               
               
               Alignm identity:158
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):13, 96

               
               
               Conread position:474-699
               
               
               Cow position:chr4:62950861-62951083 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:226
               
               
               Alignm identity:163
               
               
               Alignm E-value:8e-36
               
               
               Alignm gaps (pig, cow):75, 0

               
               
               Conread position:474-712
               
               
               Cow position:chr4:46383712-46383475 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:244
               
               
               Alignm identity:175
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):96, 75

               
               
               Conread position:475-698
               
               
               Cow position:chr4:49068091-49068320 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:232
               
               
               Alignm identity:168
               
               
               Alignm E-value:5e-33
               
               
               Alignm gaps (pig, cow):55, 28

               
               
               Conread position:475-717
               
               
               Cow position:chr4:63365714-63365480 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:246
               
               
               Alignm identity:182
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):225, 53

               
               
               Conread position:476-696
               
               
               Cow position:chr4:1822732-1822950 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:221
               
               
               Alignm identity:159
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):74, 0

               
               
               Conread position:476-704
               
               
               Cow position:chr4:48798047-48797824 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:230
               
               
               Alignm identity:158
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):144, 52

               
               
               Conread position:476-711
               
               
               Cow position:chr4:66211879-66211645 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:237
               
               
               Alignm identity:167
               
               
               Alignm E-value:6e-34
               
               
               Alignm gaps (pig, cow):222, 73

               
               
               Conread position:476-712
               
               
               Cow position:chr4:47351468-47351701 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:240
               
               
               Alignm identity:170
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):192, 65

               
               
               Conread position:476-712
               
               
               Cow position:chr4:60433202-60432966 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:239
               
               
               Alignm identity:171
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):98, 73

               
               
               Conread position:477-672
               
               
               Cow position:chr4:47530704-47530513 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:196
               
               
               Alignm identity:136
               
               
               Alignm E-value:6e-23
               
               
               Alignm gaps (pig, cow):71, 0

               
               
               Conread position:477-704
               
               
               Cow position:chr4:29811908-29811682 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:229
               
               
               Alignm identity:160
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):186, 79

               
               
               Conread position:477-711
               
               
               Cow position:chr4:13696055-13695822 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:236
               
               
               Alignm identity:163
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):221, 72

               
               
               Conread position:479-712
               
               
               Cow position:chr4:275130-275354 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:234
               
               
               Alignm identity:170
               
               
               Alignm E-value:7e-35
               
               
               Alignm gaps (pig, cow):43, 0

               
               
               Conread position:480-663
               
               
               Cow position:chr4:13255665-13255837 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:143
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):47, 0

               
               
               Conread position:480-687
               
               
               Cow position:chr4:39914560-39914764 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:210
               
               
               Alignm identity:147
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):156, 54

               
               
               Conread position:480-717
               
               
               Cow position:chr4:1060597-1060369 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:239
               
               
               Alignm identity:164
               
               
               Alignm E-value:6e-24
               
               
               Alignm gaps (pig, cow):226, 69

               
               
               Conread position:481-644
               
               
               Cow position:chr4:49629149-49629324 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:176
               
               
               Alignm identity:135
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):65, 0

               
               
               Conread position:481-699
               
               
               Cow position:chr4:14334142-14333926 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:219
               
               
               Alignm identity:154
               
               
               Alignm E-value:4e-31
               
               
               Alignm gaps (pig, cow):68, 0

               
               
               Conread position:481-699
               
               
               Cow position:chr4:58512911-58512686 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:232
               
               
               Alignm identity:162
               
               
               Alignm E-value:5e-22
               
               
               Alignm gaps (pig, cow):64, 101

               
               
               Conread position:481-712
               
               
               Cow position:chr4:49424511-49424723 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:234
               
               
               Alignm identity:169
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):6, 32

               
               
               Conread position:482-677
               
               
               Cow position:chr4:27463235-27463433 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:202
               
               
               Alignm identity:146
               
               
               Alignm E-value:9e-27
               
               
               Alignm gaps (pig, cow):55, 106

               
               
               Conread position:482-695
               
               
               Cow position:chr4:5577823-5577614 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:214
               
               
               Alignm identity:167
               
               
               Alignm E-value:1.96182e-44
               
               
               Alignm gaps (pig, cow):68, 0

               
               
               Conread position:482-704
               
               
               Cow position:chr4:20979330-20979112 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:224
               
               
               Alignm identity:157
               
               
               Alignm E-value:3e-28
               
               
               Alignm gaps (pig, cow):211, 67

               
               
               Conread position:482-705
               
               
               Cow position:chr4:51023362-51023158 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:224
               
               
               Alignm identity:163
               
               
               Alignm E-value:8e-26
               
               
               Alignm gaps (pig, cow):67, 0

               
               
               Conread position:482-712
               
               
               Cow position:chr4:45239943-45240162 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:231
               
               
               Alignm identity:161
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):46, 0

               
               
               Conread position:482-717
               
               
               Cow position:chr4:13371605-13371852 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:248
               
               
               Alignm identity:171
               
               
               Alignm E-value:7e-25
               
               
               Alignm gaps (pig, cow):5, 0

               
               
               Conread position:483-699
               
               
               Cow position:chr4:4736705-4736906 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:217
               
               
               Alignm identity:167
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):92, 0

               
               
               Conread position:483-701
               
               
               Cow position:chr4:22010390-22010181 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:219
               
               
               Alignm identity:185
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):67, 0

               
               
               Conread position:483-717
               
               
               Cow position:chr4:509230-509006 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:236
               
               
               Alignm identity:180
               
               
               Alignm E-value:4.00001e-41
               
               
               Alignm gaps (pig, cow):216, 73

               
               
               Conread position:483-717
               
               
               Cow position:chr4:10412050-10412273 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:235
               
               
               Alignm identity:194
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):54, 0

               
               
               Conread position:485-672
               
               
               Cow position:chr4:21296743-21296559 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:188
               
               
               Alignm identity:133
               
               
               Alignm E-value:7e-25
               
               
               Alignm gaps (pig, cow):64, 0

               
               
               Conread position:485-699
               
               
               Cow position:chr4:6265337-6265125 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:217
               
               
               Alignm identity:156
               
               
               Alignm E-value:4e-30
               
               
               Alignm gaps (pig, cow):166, 16

               
               
               Conread position:485-717
               
               
               Cow position:chr4:34209696-34209927 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:235
               
               
               Alignm identity:172
               
               
               Alignm E-value:3e-38
               
               
               Alignm gaps (pig, cow):212, 66

               
               
               Conread position:486-676
               
               
               Cow position:chr4:570467-570653 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:194
               
               
               Alignm identity:150
               
               
               Alignm E-value:6e-34
               
               
               Alignm gaps (pig, cow):72, 63

               
               
               Conread position:486-697
               
               
               Cow position:chr4:34208599-34208808 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:212
               
               
               Alignm identity:155
               
               
               Alignm E-value:8e-36
               
               
               Alignm gaps (pig, cow):70, 0

               
               
               Conread position:486-699
               
               
               Cow position:chr4:23570468-23570678 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:215
               
               
               Alignm identity:154
               
               
               Alignm E-value:4e-31
               
               
               Alignm gaps (pig, cow):179, 64

               
               
               Conread position:486-704
               
               
               Cow position:chr4:39006629-39006845 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:219
               
               
               Alignm identity:158
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):70, 0

               
               
               Conread position:486-711
               
               
               Cow position:chr4:50808166-50808390 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:227
               
               
               Alignm identity:161
               
               
               Alignm E-value:5e-33
               
               
               Alignm gaps (pig, cow):212, 63

               
               
               Conread position:487-699
               
               
               Cow position:chr4:20666709-20666919 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:213
               
               
               Alignm identity:151
               
               
               Alignm E-value:4e-31
               
               
               Alignm gaps (pig, cow):62, 0

               
               
               Conread position:487-710
               
               
               Cow position:chr4:57584554-57584339 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:226
               
               
               Alignm identity:166
               
               
               Alignm E-value:5e-32
               
               
               Alignm gaps (pig, cow):87, 19

               
               
               Conread position:487-712
               
               
               Cow position:chr4:21064329-21064114 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:226
               
               
               Alignm identity:168
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):46, 0

               
               
               Conread position:487-717
               
               
               Cow position:chr4:52748802-52748562 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:245
               
               
               Alignm identity:196
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):56, 166

               
               
               Conread position:488-699
               
               
               Cow position:chr4:23610623-23610832 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:212
               
               
               Alignm identity:157
               
               
               Alignm E-value:9e-38
               
               
               Alignm gaps (pig, cow):62, 0

               
               
               Conread position:488-699
               
               
               Cow position:chr4:37181231-37181022 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:212
               
               
               Alignm identity:146
               
               
               Alignm E-value:9e-27
               
               
               Alignm gaps (pig, cow):61, 0

               
               
               Conread position:488-704
               
               
               Cow position:chr4:61242890-61243104 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:218
               
               
               Alignm identity:152
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):103, 61

               
               
               Conread position:488-717
               
               
               Cow position:chr4:37915656-37915442 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:230
               
               
               Alignm identity:184
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):61, 0

               
               
               Conread position:489-685
               
               
               Cow position:chr4:35316101-35315909 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:198
               
               
               Alignm identity:139
               
               
               Alignm E-value:6e-24
               
               
               Alignm gaps (pig, cow):39, 54

               
               
               Conread position:489-712
               
               
               Cow position:chr4:12048922-12049136 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:226
               
               
               Alignm identity:166
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):138, 39

               
               
               Conread position:490-644
               
               
               Cow position:chr4:48104733-48104886 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:156
               
               
               Alignm identity:117
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):100, 60

               
               
               Conread position:490-699
               
               
               Cow position:chr4:47826089-47825882 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:210
               
               
               Alignm identity:149
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):59, 0

               
               
               Conread position:490-711
               
               
               Cow position:chr4:21246889-21246673 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:225
               
               
               Alignm identity:166
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):206, 60

               
               
               Conread position:491-644
               
               
               Cow position:chr4:16860040-16859893 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:154
               
               
               Alignm identity:113
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):59, 0

               
               
               Conread position:491-699
               
               
               Cow position:chr4:59833611-59833816 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:214
               
               
               Alignm identity:162
               
               
               Alignm E-value:5e-33
               
               
               Alignm gaps (pig, cow):20, 56

               
               
               Conread position:491-704
               
               
               Cow position:chr4:623705-623492 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:219
               
               
               Alignm identity:156
               
               
               Alignm E-value:9e-27
               
               
               Alignm gaps (pig, cow):173, 59

               
               
               Conread position:491-712
               
               
               Cow position:chr4:285333-285540 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:224
               
               
               Alignm identity:161
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):41, 28

               
               
               Conread position:491-712
               
               
               Cow position:chr4:18106101-18105882 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:223
               
               
               Alignm identity:157
               
               
               Alignm E-value:4e-30
               
               
               Alignm gaps (pig, cow):207, 58

               
               
               Conread position:492-707
               
               
               Cow position:chr4:20243807-20244021 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:217
               
               
               Alignm identity:158
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):206, 58

               
               
               Conread position:492-711
               
               
               Cow position:chr4:37935604-37935394 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:220
               
               
               Alignm identity:173
               
               
               Alignm E-value:1.96182e-44
               
               
               Alignm gaps (pig, cow):57, 0

               
               
               Conread position:492-717
               
               
               Cow position:chr4:19561372-19561580 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:226
               
               
               Alignm identity:168
               
               
               Alignm E-value:4e-31
               
               
               Alignm gaps (pig, cow):64, 0

               
               
               Conread position:495-646
               
               
               Cow position:chr4:48212793-48212647 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:152
               
               
               Alignm identity:120
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):33, 0

               
               
               Conread position:495-693
               
               
               Cow position:chr4:33593303-33593499 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:141
               
               
               Alignm E-value:3e-28
               
               
               Alignm gaps (pig, cow):54, 0

               
               
               Conread position:495-699
               
               
               Cow position:chr4:27590156-27589960 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:205
               
               
               Alignm identity:150
               
               
               Alignm E-value:4e-30
               
               
               Alignm gaps (pig, cow):33, 0

               
               
               Conread position:495-711
               
               
               Cow position:chr4:16008879-16008664 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:218
               
               
               Alignm identity:152
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):203, 54

               
               
               Conread position:495-717
               
               
               Cow position:chr4:19597634-19597420 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:224
               
               
               Alignm identity:173
               
               
               Alignm E-value:4.00001e-41
               
               
               Alignm gaps (pig, cow):16, 56

               
               
               Conread position:496-693
               
               
               Cow position:chr4:6677414-6677609 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:198
               
               
               Alignm identity:138
               
               
               Alignm E-value:8e-26
               
               
               Alignm gaps (pig, cow):53, 0

               
               
               Conread position:496-699
               
               
               Cow position:chr4:17200961-17201148 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:155
               
               
               Alignm E-value:5e-32
               
               
               Alignm gaps (pig, cow):54, 0

               
               
               Conread position:496-699
               
               
               Cow position:chr4:19007721-19007924 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:208
               
               
               Alignm identity:163
               
               
               Alignm E-value:4.00001e-41
               
               
               Alignm gaps (pig, cow):22, 36

               
               
               Conread position:496-711
               
               
               Cow position:chr4:20272060-20272274 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:217
               
               
               Alignm identity:148
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):202, 53

               
               
               Conread position:498-699
               
               
               Cow position:chr4:12033950-12034138 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:203
               
               
               Alignm identity:153
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):194, 30

               
               
               Conread position:498-699
               
               
               Cow position:chr4:23060323-23060121 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:203
               
               
               Alignm identity:169
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):84, 0

               
               
               Conread position:498-712
               
               
               Cow position:chr4:32827436-32827234 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:216
               
               
               Alignm identity:160
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):204, 30

               
               
               Conread position:498-717
               
               
               Cow position:chr4:23599856-23600075 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:225
               
               
               Alignm identity:178
               
               
               Alignm E-value:1.4013e-45
               
               
               Alignm gaps (pig, cow):137, 26

               
               
               Conread position:499-699
               
               
               Cow position:chr4:1305808-1306006 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:201
               
               
               Alignm identity:142
               
               
               Alignm E-value:3e-28
               
               
               Alignm gaps (pig, cow):50, 0

               
               
               Conread position:499-717
               
               
               Cow position:chr4:45738795-45738584 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:221
               
               
               Alignm identity:172
               
               
               Alignm E-value:4.00001e-40
               
               
               Alignm gaps (pig, cow):119, 29

               
               
               Conread position:500-712
               
               
               Cow position:chr4:6630606-6630400 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:213
               
               
               Alignm identity:148
               
               
               Alignm E-value:8e-26
               
               
               Alignm gaps (pig, cow):28, 0

               
               
               Conread position:501-633
               
               
               Cow position:chr4:46435134-46435264 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:133
               
               
               Alignm identity:110
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):49, 0

               
               
               Conread position:502-697
               
               
               Cow position:chr4:60371145-60370953 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:201
               
               
               Alignm identity:151
               
               
               Alignm E-value:4e-30
               
               
               Alignm gaps (pig, cow):81, 26

               
               
               Conread position:502-704
               
               
               Cow position:chr4:66381561-66381360 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:205
               
               
               Alignm identity:143
               
               
               Alignm E-value:7e-25
               
               
               Alignm gaps (pig, cow):107, 47

               
               
               Conread position:502-712
               
               
               Cow position:chr4:56514248-56514045 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:211
               
               
               Alignm identity:165
               
               
               Alignm E-value:4.99983e-42
               
               
               Alignm gaps (pig, cow):41, 0

               
               
               Conread position:503-711
               
               
               Cow position:chr4:40229715-40229922 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:210
               
               
               Alignm identity:146
               
               
               Alignm E-value:9e-27
               
               
               Alignm gaps (pig, cow):195, 46

               
               
               Conread position:503-713
               
               
               Cow position:chr4:69305344-69305543 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:211
               
               
               Alignm identity:149
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):47, 0

               
               
               Conread position:504-717
               
               
               Cow position:chr4:34310768-34310554 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:215
               
               
               Alignm identity:136
               
               
               Alignm E-value:9.99995e-41
               
               
               Alignm gaps (pig, cow):193, 0

               
               
               Conread position:505-717
               
               
               Cow position:chr4:33421671-33421462 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:216
               
               
               Alignm identity:157
               
               
               Alignm E-value:4e-31
               
               
               Alignm gaps (pig, cow):191, 45

               
               
               Conread position:506-710
               
               
               Cow position:chr4:65982199-65982001 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:206
               
               
               Alignm identity:142
               
               
               Alignm E-value:5e-22
               
               
               Alignm gaps (pig, cow):192, 22

               
               
               Conread position:507-710
               
               
               Cow position:chr4:23451404-23451206 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:207
               
               
               Alignm identity:165
               
               
               Alignm E-value:9.99967e-42
               
               
               Alignm gaps (pig, cow):190, 48

               
               
               Conread position:508-717
               
               
               Cow position:chr4:45662807-45662613 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:210
               
               
               Alignm identity:163
               
               
               Alignm E-value:8e-36
               
               
               Alignm gaps (pig, cow):48, 0

               
               
               Conread position:511-698
               
               
               Cow position:chr4:52584686-52584504 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:146
               
               
               Alignm E-value:2e-34
               
               
               Alignm gaps (pig, cow):64, 38

               
               
               Conread position:513-701
               
               
               Cow position:chr4:26373970-26373785 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:190
               
               
               Alignm identity:133
               
               
               Alignm E-value:6e-23
               
               
               Alignm gaps (pig, cow):80, 15

               
               
               Conread position:513-712
               
               
               Cow position:chr4:48961792-48961589 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:206
               
               
               Alignm identity:165
               
               
               Alignm E-value:1.96182e-44
               
               
               Alignm gaps (pig, cow):120, 43

               
               
               Conread position:514-699
               
               
               Cow position:chr4:9876015-9875832 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:187
               
               
               Alignm identity:131
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):138, 35

               
               
               Conread position:514-699
               
               
               Cow position:chr4:57245914-57245731 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:186
               
               
               Alignm identity:133
               
               
               Alignm E-value:9e-27
               
               
               Alignm gaps (pig, cow):35, 0

               
               
               Conread position:514-711
               
               
               Cow position:chr4:4487844-4488040 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:140
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):184, 35

               
               
               Conread position:514-711
               
               
               Cow position:chr4:35319488-35319292 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:142
               
               
               Alignm E-value:3e-28
               
               
               Alignm gaps (pig, cow):184, 35

               
               
               Conread position:515-699
               
               
               Cow position:chr4:21609245-21609063 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:128
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):34, 0

               
               
               Conread position:515-711
               
               
               Cow position:chr4:11021952-11021764 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:144
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):65, 25

               
               
               Conread position:515-712
               
               
               Cow position:chr4:637698-637893 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:141
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):183, 34

               
               
               Conread position:516-699
               
               
               Cow position:chr4:66554331-66554152 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:128
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):34, 0

               
               
               Conread position:516-701
               
               
               Cow position:chr4:65450219-65450036 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:136
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):39, 143

               
               
               Conread position:516-707
               
               
               Cow position:chr4:48182416-48182605 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:193
               
               
               Alignm identity:134
               
               
               Alignm E-value:6e-23
               
               
               Alignm gaps (pig, cow):67, 40

               
               
               Conread position:517-699
               
               
               Cow position:chr4:63090447-63090627 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:183
               
               
               Alignm identity:127
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):32, 0

               
               
               Conread position:518-712
               
               
               Cow position:chr4:14414641-14414451 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:200
               
               
               Alignm identity:150
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):16, 31

               
               
               Conread position:518-712
               
               
               Cow position:chr4:23509286-23509484 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:148
               
               
               Alignm E-value:5e-33
               
               
               Alignm gaps (pig, cow):37, 0

               
               
               Conread position:519-699
               
               
               Cow position:chr4:10703981-10703803 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:181
               
               
               Alignm identity:140
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):31, 0

               
               
               Conread position:519-699
               
               
               Cow position:chr4:39128235-39128411 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:147
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):70, 30

               
               
               Conread position:519-699
               
               
               Cow position:chr4:51830541-51830720 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:181
               
               
               Alignm identity:125
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):24, 0

               
               
               Conread position:519-712
               
               
               Cow position:chr4:33910010-33910192 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:195
               
               
               Alignm identity:141
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):177, 16

               
               
               Conread position:519-714
               
               
               Cow position:chr4:29114330-29114137 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:196
               
               
               Alignm identity:134
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):31, 0

               
               
               Conread position:520-702
               
               
               Cow position:chr4:58424681-58424507 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:134
               
               
               Alignm E-value:5e-22
               
               
               Alignm gaps (pig, cow):7, 30

               
               
               Conread position:520-711
               
               
               Cow position:chr4:15848040-15848230 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:193
               
               
               Alignm identity:133
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):178, 29

               
               
               Conread position:521-652
               
               
               Cow position:chr4:27510977-27511106 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:132
               
               
               Alignm identity:104
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):35, 0

               
               
               Conread position:524-708
               
               
               Cow position:chr4:40056676-40056859 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:186
               
               
               Alignm identity:136
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):174, 26

               
               
               Conread position:524-717
               
               
               Cow position:chr4:19582907-19582721 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:195
               
               
               Alignm identity:151
               
               
               Alignm E-value:7e-35
               
               
               Alignm gaps (pig, cow):51, 26

               
               
               Conread position:525-711
               
               
               Cow position:chr4:36730900-36731084 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:187
               
               
               Alignm identity:146
               
               
               Alignm E-value:3e-39
               
               
               Alignm gaps (pig, cow):25, 0

               
               
               Conread position:525-717
               
               
               Cow position:chr4:17052886-17052705 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:194
               
               
               Alignm identity:144
               
               
               Alignm E-value:8e-26
               
               
               Alignm gaps (pig, cow):174, 24

               
               
               Conread position:526-671
               
               
               Cow position:chr4:54975014-54975162 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:149
               
               
               Alignm identity:116
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):20, 0

               
               
               Conread position:526-699
               
               
               Cow position:chr4:488732-488559 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:176
               
               
               Alignm identity:126
               
               
               Alignm E-value:6e-24
               
               
               Alignm gaps (pig, cow):100, 120

               
               
               Conread position:526-699
               
               
               Cow position:chr4:54468586-54468413 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:176
               
               
               Alignm identity:145
               
               
               Alignm E-value:9.99967e-42
               
               
               Alignm gaps (pig, cow):6, 25

               
               
               Conread position:526-699
               
               
               Cow position:chr4:54937597-54937766 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:174
               
               
               Alignm identity:132
               
               
               Alignm E-value:4e-30
               
               
               Alignm gaps (pig, cow):23, 0

               
               
               Conread position:526-710
               
               
               Cow position:chr4:46060650-46060835 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:191
               
               
               Alignm identity:142
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):10, 110

               
               
               Conread position:528-672
               
               
               Cow position:chr4:37342830-37342968 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:145
               
               
               Alignm identity:112
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):28, 0

               
               
               Conread position:528-699
               
               
               Cow position:chr4:56570516-56570683 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:172
               
               
               Alignm identity:132
               
               
               Alignm E-value:4e-31
               
               
               Alignm gaps (pig, cow):52, 0

               
               
               Conread position:528-711
               
               
               Cow position:chr4:45775628-45775455 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:186
               
               
               Alignm identity:141
               
               
               Alignm E-value:9e-27
               
               
               Alignm gaps (pig, cow):164, 22

               
               
               Conread position:529-717
               
               
               Cow position:chr4:620438-620254 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:156
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):20, 0

               
               
               Conread position:530-699
               
               
               Cow position:chr4:29527464-29527295 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:174
               
               
               Alignm identity:129
               
               
               Alignm E-value:7e-25
               
               
               Alignm gaps (pig, cow):14, 124

               
               
               Conread position:530-700
               
               
               Cow position:chr4:48591695-48591525 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:173
               
               
               Alignm identity:124
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):55, 26

               
               
               Conread position:530-711
               
               
               Cow position:chr4:6792156-6792327 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:131
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):11, 0

               
               
               Conread position:530-711
               
               
               Cow position:chr4:7571124-7571299 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:142
               
               
               Alignm E-value:7e-35
               
               
               Alignm gaps (pig, cow):26, 0

               
               
               Conread position:532-699
               
               
               Cow position:chr4:2893741-2893902 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:168
               
               
               Alignm identity:129
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):18, 0

               
               
               Conread position:536-714
               
               
               Cow position:chr4:48098787-48098608 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:181
               
               
               Alignm identity:126
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):46, 9

               
               
               Conread position:540-695
               
               
               Cow position:chr4:52632246-52632101 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:156
               
               
               Alignm identity:117
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):17, 0

               
               
               Conread position:540-698
               
               
               Cow position:chr4:18522111-18521953 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:160
               
               
               Alignm identity:117
               
               
               Alignm E-value:6e-24
               
               
               Alignm gaps (pig, cow):15, 33

               
               
               Conread position:540-698
               
               
               Cow position:chr4:19114017-19114173 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:161
               
               
               Alignm identity:120
               
               
               Alignm E-value:6e-23
               
               
               Alignm gaps (pig, cow):69, 25

               
               
               Conread position:540-699
               
               
               Cow position:chr4:17660482-17660316 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:167
               
               
               Alignm identity:123
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):101, 0

               
               
               Conread position:540-699
               
               
               Cow position:chr4:24415008-24415167 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:162
               
               
               Alignm identity:121
               
               
               Alignm E-value:8e-26
               
               
               Alignm gaps (pig, cow):40, 104

               
               
               Conread position:540-699
               
               
               Cow position:chr4:39455777-39455927 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:160
               
               
               Alignm identity:124
               
               
               Alignm E-value:9e-27
               
               
               Alignm gaps (pig, cow):110, 0

               
               
               Conread position:540-706
               
               
               Cow position:chr4:62570538-62570703 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:168
               
               
               Alignm identity:121
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):84, 103

               
               
               Conread position:540-711
               
               
               Cow position:chr4:5461130-5460970 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:175
               
               
               Alignm identity:135
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):35, 53

               
               
               Conread position:540-711
               
               
               Cow position:chr4:20279063-20279233 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:172
               
               
               Alignm identity:120
               
               
               Alignm E-value:5e-22
               
               
               Alignm gaps (pig, cow):40, 0

               
               
               Conread position:540-712
               
               
               Cow position:chr4:33395965-33395804 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:173
               
               
               Alignm identity:133
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):39, 0

               
               
               Conread position:540-712
               
               
               Cow position:chr4:46385855-46385681 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:175
               
               
               Alignm identity:142
               
               
               Alignm E-value:9.99995e-41
               
               
               Alignm gaps (pig, cow):157, 0

               
               
               Conread position:540-712
               
               
               Cow position:chr4:59785041-59785209 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:175
               
               
               Alignm identity:138
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):35, 9

               
               
               Conread position:540-714
               
               
               Cow position:chr4:19744612-19744778 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:175
               
               
               Alignm identity:136
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):52, 0

               
               
               Conread position:540-716
               
               
               Cow position:chr4:51122782-51122951 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:177
               
               
               Alignm identity:129
               
               
               Alignm E-value:6e-24
               
               
               Alignm gaps (pig, cow):10, 0

               
               
               Conread position:540-717
               
               
               Cow position:chr4:5999471-5999295 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:179
               
               
               Alignm identity:140
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):67, 166

               
               
               Conread position:540-717
               
               
               Cow position:chr4:41867167-41867340 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:178
               
               
               Alignm identity:143
               
               
               Alignm E-value:1e-39
               
               
               Alignm gaps (pig, cow):110, 0

               
               
               Conread position:541-701
               
               
               Cow position:chr4:28772343-28772188 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:161
               
               
               Alignm identity:130
               
               
               Alignm E-value:6e-34
               
               
               Alignm gaps (pig, cow):109, 0

               
               
               Conread position:541-717
               
               
               Cow position:chr4:15462549-15462379 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:178
               
               
               Alignm identity:136
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):156, 63

               
               
               Conread position:541-717
               
               
               Cow position:chr4:19542520-19542693 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:180
               
               
               Alignm identity:138
               
               
               Alignm E-value:4e-30
               
               
               Alignm gaps (pig, cow):157, 108

               
               
               Conread position:541-717
               
               
               Cow position:chr4:27529837-27530013 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:177
               
               
               Alignm identity:143
               
               
               Alignm E-value:1.99965e-42
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:541-717
               
               
               Cow position:chr4:46591386-46591561 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:179
               
               
               Alignm identity:139
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):102, 38

               
               
               Conread position:542-704
               
               
               Cow position:chr4:61969913-61969751 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:163
               
               
               Alignm identity:131
               
               
               Alignm E-value:9e-38
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:542-712
               
               
               Cow position:chr4:26746209-26746373 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:172
               
               
               Alignm identity:133
               
               
               Alignm E-value:4e-30
               
               
               Alignm gaps (pig, cow):164, 108

               
               
               Conread position:543-699
               
               
               Cow position:chr4:42638559-42638408 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:157
               
               
               Alignm identity:116
               
               
               Alignm E-value:6e-23
               
               
               Alignm gaps (pig, cow):107, 0

               
               
               Conread position:543-717
               
               
               Cow position:chr4:8801229-8801397 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:180
               
               
               Alignm identity:136
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):19, 76

               
               
               Conread position:544-699
               
               
               Cow position:chr4:33623445-33623596 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:156
               
               
               Alignm identity:124
               
               
               Alignm E-value:5e-32
               
               
               Alignm gaps (pig, cow):106, 0

               
               
               Conread position:544-699
               
               
               Cow position:chr4:67042690-67042844 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:156
               
               
               Alignm identity:115
               
               
               Alignm E-value:7e-25
               
               
               Alignm gaps (pig, cow):87, 0

               
               
               Conread position:544-702
               
               
               Cow position:chr4:58261426-58261269 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:159
               
               
               Alignm identity:118
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):36, 0

               
               
               Conread position:545-704
               
               
               Cow position:chr4:62567133-62567293 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:161
               
               
               Alignm identity:125
               
               
               Alignm E-value:5e-32
               
               
               Alignm gaps (pig, cow):10, 0

               
               
               Conread position:545-711
               
               
               Cow position:chr4:47348560-47348717 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:167
               
               
               Alignm identity:136
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):62, 0

               
               
               Conread position:545-717
               
               
               Cow position:chr4:29237422-29237262 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:173
               
               
               Alignm identity:130
               
               
               Alignm E-value:7e-25
               
               
               Alignm gaps (pig, cow):55, 0

               
               
               Conread position:546-710
               
               
               Cow position:chr4:203419-203253 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:167
               
               
               Alignm identity:128
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):29, 0

               
               
               Conread position:546-717
               
               
               Cow position:chr4:20298998-20299169 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:173
               
               
               Alignm identity:146
               
               
               Alignm E-value:1.4013e-45
               
               
               Alignm gaps (pig, cow):35, 145

               
               
               Conread position:547-649
               
               
               Cow position:chr4:14736222-14736326 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:105
               
               
               Alignm identity:87
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):17, 0

               
               
               Conread position:547-717
               
               
               Cow position:chr4:49813935-49813767 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:174
               
               
               Alignm identity:130
               
               
               Alignm E-value:7e-25
               
               
               Alignm gaps (pig, cow):153, 14

               
               
               Conread position:548-710
               
               
               Cow position:chr4:27561127-27561285 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:163
               
               
               Alignm identity:120
               
               
               Alignm E-value:7e-25
               
               
               Alignm gaps (pig, cow):102, 0

               
               
               Conread position:548-710
               
               
               Cow position:chr4:40823384-40823226 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:163
               
               
               Alignm identity:128
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):102, 0

               
               
               Conread position:548-717
               
               
               Cow position:chr4:657087-656919 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:173
               
               
               Alignm identity:143
               
               
               Alignm E-value:3e-38
               
               
               Alignm gaps (pig, cow):33, 8

               
               
               Conread position:548-717
               
               
               Cow position:chr4:41292248-41292080 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:170
               
               
               Alignm identity:137
               
               
               Alignm E-value:3e-39
               
               
               Alignm gaps (pig, cow):15, 0

               
               
               Conread position:549-717
               
               
               Cow position:chr4:54667959-54667792 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:171
               
               
               Alignm identity:137
               
               
               Alignm E-value:8e-36
               
               
               Alignm gaps (pig, cow):149, 118

               
               
               Conread position:550-699
               
               
               Cow position:chr4:22354672-22354825 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:155
               
               
               Alignm identity:118
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):119, 30

               
               
               Conread position:550-702
               
               
               Cow position:chr4:62411607-62411758 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:154
               
               
               Alignm identity:114
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):89, 31

               
               
               Conread position:550-712
               
               
               Cow position:chr4:46550117-46550279 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:163
               
               
               Alignm identity:137
               
               
               Alignm E-value:2.00386e-43
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:551-712
               
               
               Cow position:chr4:19316263-19316111 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:162
               
               
               Alignm identity:125
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):30, 0

               
               
               Conread position:552-699
               
               
               Cow position:chr4:36396389-36396244 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:148
               
               
               Alignm identity:117
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):29, 0

               
               
               Conread position:552-710
               
               
               Cow position:chr4:18439838-18439680 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:160
               
               
               Alignm identity:123
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):156, 116

               
               
               Conread position:552-712
               
               
               Cow position:chr4:32725959-32726117 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:161
               
               
               Alignm identity:126
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):30, 0

               
               
               Conread position:552-717
               
               
               Cow position:chr4:10968650-10968489 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:168
               
               
               Alignm identity:130
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):145, 83

               
               
               Conread position:553-699
               
               
               Cow position:chr4:4321270-4321124 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:147
               
               
               Alignm identity:125
               
               
               Alignm E-value:1e-39
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:553-699
               
               
               Cow position:chr4:52177404-52177258 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:147
               
               
               Alignm identity:120
               
               
               Alignm E-value:7e-35
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:553-712
               
               
               Cow position:chr4:36073601-36073757 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:160
               
               
               Alignm identity:116
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):28, 0

               
               
               Conread position:553-712
               
               
               Cow position:chr4:51630393-51630554 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:162
               
               
               Alignm identity:128
               
               
               Alignm E-value:6e-34
               
               
               Alignm gaps (pig, cow):146, 0

               
               
               Conread position:554-696
               
               
               Cow position:chr4:52177387-52177527 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:144
               
               
               Alignm identity:119
               
               
               Alignm E-value:5e-32
               
               
               Alignm gaps (pig, cow):15, 97

               
               
               Conread position:554-699
               
               
               Cow position:chr4:35940275-35940130 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:147
               
               
               Alignm identity:122
               
               
               Alignm E-value:7e-35
               
               
               Alignm gaps (pig, cow):7, 27

               
               
               Conread position:555-699
               
               
               Cow position:chr4:27664743-27664887 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:145
               
               
               Alignm identity:107
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:556-686
               
               
               Cow position:chr4:18755924-18756050 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:131
               
               
               Alignm identity:105
               
               
               Alignm E-value:8e-26
               
               
               Alignm gaps (pig, cow):94, 0

               
               
               Conread position:556-712
               
               
               Cow position:chr4:3283710-3283556 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:158
               
               
               Alignm identity:130
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):69, 119

               
               
               Conread position:556-712
               
               
               Cow position:chr4:62983814-62983659 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:157
               
               
               Alignm identity:126
               
               
               Alignm E-value:7e-35
               
               
               Alignm gaps (pig, cow):29, 0

               
               
               Conread position:556-731
               
               
               Cow position:chr4:65464077-65463914 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:176
               
               
               Alignm identity:136
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):32, 0

               
               
               Conread position:557-687
               
               
               Cow position:chr4:14505260-14505134 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:131
               
               
               Alignm identity:107
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):82, 0

               
               
               Conread position:557-693
               
               
               Cow position:chr4:123461-123325 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:137
               
               
               Alignm identity:109
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:557-698
               
               
               Cow position:chr4:41898996-41899137 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:142
               
               
               Alignm identity:105
               
               
               Alignm E-value:6e-23
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:557-699
               
               
               Cow position:chr4:455034-455175 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:144
               
               
               Alignm identity:112
               
               
               Alignm E-value:8e-26
               
               
               Alignm gaps (pig, cow):80, 94

               
               
               Conread position:557-699
               
               
               Cow position:chr4:31348454-31348312 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:143
               
               
               Alignm identity:111
               
               
               Alignm E-value:3e-28
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:557-699
               
               
               Cow position:chr4:46597123-46597253 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:143
               
               
               Alignm identity:113
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):24, 0

               
               
               Conread position:557-699
               
               
               Cow position:chr4:47289810-47289952 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:143
               
               
               Alignm identity:116
               
               
               Alignm E-value:5e-33
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:557-699
               
               
               Cow position:chr4:59106071-59105929 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:143
               
               
               Alignm identity:112
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:557-700
               
               
               Cow position:chr4:48235379-48235522 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:144
               
               
               Alignm identity:113
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:557-702
               
               
               Cow position:chr4:36813112-36813254 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:147
               
               
               Alignm identity:111
               
               
               Alignm E-value:6e-23
               
               
               Alignm gaps (pig, cow):115, 93

               
               
               Conread position:557-702
               
               
               Cow position:chr4:46083156-46083008 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:149
               
               
               Alignm identity:109
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):31, 0

               
               
               Conread position:557-702
               
               
               Cow position:chr4:52225749-52225894 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:146
               
               
               Alignm identity:107
               
               
               Alignm E-value:6e-23
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:557-705
               
               
               Cow position:chr4:51866734-51866881 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:150
               
               
               Alignm identity:121
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):23, 117

               
               
               Conread position:557-708
               
               
               Cow position:chr4:33612623-33612472 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:152
               
               
               Alignm identity:133
               
               
               Alignm E-value:5.60519e-45
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:557-709
               
               
               Cow position:chr4:34630642-34630782 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:153
               
               
               Alignm identity:123
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):23, 0

               
               
               Conread position:557-710
               
               
               Cow position:chr4:2141486-2141634 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:154
               
               
               Alignm identity:130
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):23, 0

               
               
               Conread position:557-710
               
               
               Cow position:chr4:3251796-3251643 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:154
               
               
               Alignm identity:126
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:557-710
               
               
               Cow position:chr4:31172406-31172563 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:158
               
               
               Alignm identity:115
               
               
               Alignm E-value:5e-22
               
               
               Alignm gaps (pig, cow):31, 0

               
               
               Conread position:557-711
               
               
               Cow position:chr4:1237376-1237226 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:156
               
               
               Alignm identity:123
               
               
               Alignm E-value:3e-28
               
               
               Alignm gaps (pig, cow):139, 40

               
               
               Conread position:557-712
               
               
               Cow position:chr4:3340691-3340842 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:156
               
               
               Alignm identity:129
               
               
               Alignm E-value:8e-37
               
               
               Alignm gaps (pig, cow):93, 0

               
               
               Conread position:557-712
               
               
               Cow position:chr4:10471963-10472114 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:156
               
               
               Alignm identity:126
               
               
               Alignm E-value:6e-34
               
               
               Alignm gaps (pig, cow):93, 0

               
               
               Conread position:557-712
               
               
               Cow position:chr4:19699839-19699997 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:159
               
               
               Alignm identity:129
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):33, 0

               
               
               Conread position:557-712
               
               
               Cow position:chr4:44073030-44072875 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:156
               
               
               Alignm identity:131
               
               
               Alignm E-value:4.00001e-41
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:557-712
               
               
               Cow position:chr4:63096335-63096183 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:156
               
               
               Alignm identity:124
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):58, 0

               
               
               Conread position:557-717
               
               
               Cow position:chr4:22345275-22345121 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:162
               
               
               Alignm identity:123
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):149, 93

               
               
               Conread position:557-717
               
               
               Cow position:chr4:26307760-26307603 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:161
               
               
               Alignm identity:128
               
               
               Alignm E-value:5e-33
               
               
               Alignm gaps (pig, cow):75, 0

               
               
               Conread position:557-717
               
               
               Cow position:chr4:34641989-34641831 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:161
               
               
               Alignm identity:133
               
               
               Alignm E-value:1e-38
               
               
               Alignm gaps (pig, cow):92, 0

               
               
               Conread position:557-717
               
               
               Cow position:chr4:35981729-35981889 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:161
               
               
               Alignm identity:137
               
               
               Alignm E-value:1.96182e-44
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:557-717
               
               
               Cow position:chr4:37691568-37691413 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:165
               
               
               Alignm identity:123
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):140, 78

               
               
               Conread position:557-717
               
               
               Cow position:chr4:43495642-43495797 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:161
               
               
               Alignm identity:122
               
               
               Alignm E-value:9e-27
               
               
               Alignm gaps (pig, cow):23, 0

               
               
               Conread position:557-717
               
               
               Cow position:chr4:44612743-44612900 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:163
               
               
               Alignm identity:126
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):138, 23

               
               
               Conread position:557-717
               
               
               Cow position:chr4:51739963-51739813 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:161
               
               
               Alignm identity:120
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):89, 0

               
               
               Conread position:558-692
               
               
               Cow position:chr4:4300280-4300414 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:135
               
               
               Alignm identity:103
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:558-697
               
               
               Cow position:chr4:66127587-66127448 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:140
               
               
               Alignm identity:107
               
               
               Alignm E-value:8e-26
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:558-702
               
               
               Cow position:chr4:22249702-22249563 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:147
               
               
               Alignm identity:115
               
               
               Alignm E-value:6e-23
               
               
               Alignm gaps (pig, cow):111, 23

               
               
               Conread position:558-709
               
               
               Cow position:chr4:40396254-40396405 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:153
               
               
               Alignm identity:113
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):140, 14

               
               
               Conread position:558-710
               
               
               Cow position:chr4:5797708-5797861 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:158
               
               
               Alignm identity:119
               
               
               Alignm E-value:6e-23
               
               
               Alignm gaps (pig, cow):32, 98

               
               
               Conread position:558-711
               
               
               Cow position:chr4:2536574-2536721 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:154
               
               
               Alignm identity:133
               
               
               Alignm E-value:1e-39
               
               
               Alignm gaps (pig, cow):31, 0

               
               
               Conread position:558-717
               
               
               Cow position:chr4:23847310-23847152 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:160
               
               
               Alignm identity:130
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):110, 0

               
               
               Conread position:558-717
               
               
               Cow position:chr4:55395509-55395657 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:161
               
               
               Alignm identity:125
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):148, 84

               
               
               Conread position:559-694
               
               
               Cow position:chr4:6149188-6149055 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:136
               
               
               Alignm identity:104
               
               
               Alignm E-value:6e-23
               
               
               Alignm gaps (pig, cow):91, 0

               
               
               Conread position:559-699
               
               
               Cow position:chr4:9821898-9822037 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:141
               
               
               Alignm identity:104
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):59, 0

               
               
               Conread position:559-703
               
               
               Cow position:chr4:37787009-37787154 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:146
               
               
               Alignm identity:83
               
               
               Alignm E-value:6e-23
               
               
               Alignm gaps (pig, cow):138, 0

               
               
               Conread position:559-711
               
               
               Cow position:chr4:12260040-12259890 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:155
               
               
               Alignm identity:124
               
               
               Alignm E-value:4e-30
               
               
               Alignm gaps (pig, cow):22, 92

               
               
               Conread position:559-717
               
               
               Cow position:chr4:23445309-23445153 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:163
               
               
               Alignm identity:127
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):139, 21

               
               
               Conread position:559-717
               
               
               Cow position:chr4:31004662-31004511 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:160
               
               
               Alignm identity:121
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):147, 14

               
               
               Conread position:560-699
               
               
               Cow position:chr4:45367479-45367611 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:140
               
               
               Alignm identity:109
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):21, 0

               
               
               Conread position:560-699
               
               
               Cow position:chr4:45583385-45583245 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:141
               
               
               Alignm identity:111
               
               
               Alignm E-value:3e-28
               
               
               Alignm gaps (pig, cow):97, 0

               
               
               Conread position:560-702
               
               
               Cow position:chr4:36755493-36755631 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:143
               
               
               Alignm identity:115
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):109, 0

               
               
               Conread position:560-702
               
               
               Cow position:chr4:58687694-58687552 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:143
               
               
               Alignm identity:105
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:560-712
               
               
               Cow position:chr4:3837022-3837174 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:153
               
               
               Alignm identity:116
               
               
               Alignm E-value:3e-28
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:560-712
               
               
               Cow position:chr4:33357674-33357825 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:153
               
               
               Alignm identity:126
               
               
               Alignm E-value:8e-37
               
               
               Alignm gaps (pig, cow):60, 0

               
               
               Conread position:560-717
               
               
               Cow position:chr4:59008626-59008473 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:159
               
               
               Alignm identity:125
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):146, 20

               
               
               Conread position:561-707
               
               
               Cow position:chr4:19577807-19577952 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:147
               
               
               Alignm identity:122
               
               
               Alignm E-value:8e-36
               
               
               Alignm gaps (pig, cow):19, 0

               
               
               Conread position:561-708
               
               
               Cow position:chr4:42922102-42921964 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:149
               
               
               Alignm identity:124
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):141, 78

               
               
               Conread position:561-712
               
               
               Cow position:chr4:63965247-63965098 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:154
               
               
               Alignm identity:122
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):46, 90

               
               
               Conread position:561-723
               
               
               Cow position:chr4:62921113-62920960 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:163
               
               
               Alignm identity:125
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):71, 0

               
               
               Conread position:562-717
               
               
               Cow position:chr4:40410375-40410225 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:156
               
               
               Alignm identity:129
               
               
               Alignm E-value:7e-35
               
               
               Alignm gaps (pig, cow):73, 0

               
               
               Conread position:563-676
               
               
               Cow position:chr4:49089540-49089653 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:114
               
               
               Alignm identity:99
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:563-699
               
               
               Cow position:chr4:24688603-24688467 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:137
               
               
               Alignm identity:108
               
               
               Alignm E-value:3e-28
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:563-699
               
               
               Cow position:chr4:58433465-58433331 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:137
               
               
               Alignm identity:104
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):87, 0

               
               
               Conread position:563-704
               
               
               Cow position:chr4:5630007-5629870 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:142
               
               
               Alignm identity:106
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):76, 0

               
               
               Conread position:563-704
               
               
               Cow position:chr4:12676559-12676687 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:142
               
               
               Alignm identity:112
               
               
               Alignm E-value:5e-22
               
               
               Alignm gaps (pig, cow):17, 0

               
               
               Conread position:563-712
               
               
               Cow position:chr4:54455597-54455452 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:150
               
               
               Alignm identity:126
               
               
               Alignm E-value:8e-36
               
               
               Alignm gaps (pig, cow):9, 0

               
               
               Conread position:563-717
               
               
               Cow position:chr4:19708687-19708839 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:158
               
               
               Alignm identity:123
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):140, 87

               
               
               Conread position:563-717
               
               
               Cow position:chr4:20157667-20157521 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:157
               
               
               Alignm identity:124
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):17, 77

               
               
               Conread position:564-695
               
               
               Cow position:chr4:43762788-43762918 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:132
               
               
               Alignm identity:105
               
               
               Alignm E-value:9e-27
               
               
               Alignm gaps (pig, cow):93, 0

               
               
               Conread position:565-702
               
               
               Cow position:chr4:40434387-40434252 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:138
               
               
               Alignm identity:104
               
               
               Alignm E-value:5e-22
               
               
               Alignm gaps (pig, cow):39, 0

               
               
               Conread position:565-712
               
               
               Cow position:chr4:18577029-18576883 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:149
               
               
               Alignm identity:124
               
               
               Alignm E-value:7e-35
               
               
               Alignm gaps (pig, cow):20, 97

               
               
               Conread position:566-712
               
               
               Cow position:chr4:7808327-7808477 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:151
               
               
               Alignm identity:122
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):14, 0

               
               
               Conread position:568-712
               
               
               Cow position:chr4:33062661-33062805 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:145
               
               
               Alignm identity:118
               
               
               Alignm E-value:6e-34
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:569-711
               
               
               Cow position:chr4:21233119-21232984 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:143
               
               
               Alignm identity:121
               
               
               Alignm E-value:5e-33
               
               
               Alignm gaps (pig, cow):63, 0

               
               
               Conread position:570-712
               
               
               Cow position:chr4:65842009-65841871 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:143
               
               
               Alignm identity:111
               
               
               Alignm E-value:8e-26
               
               
               Alignm gaps (pig, cow):80, 0

               
               
               Conread position:570-717
               
               
               Cow position:chr4:3268582-3268436 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:148
               
               
               Alignm identity:110
               
               
               Alignm E-value:6e-24
               
               
               Alignm gaps (pig, cow):68, 0

               
               
               Conread position:570-717
               
               
               Cow position:chr4:19322326-19322186 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:149
               
               
               Alignm identity:126
               
               
               Alignm E-value:5e-33
               
               
               Alignm gaps (pig, cow):128, 80

               
               
               Conread position:570-717
               
               
               Cow position:chr4:29291275-29291415 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:148
               
               
               Alignm identity:118
               
               
               Alignm E-value:3e-28
               
               
               Alignm gaps (pig, cow):61, 0

               
               
               Conread position:570-717
               
               
               Cow position:chr4:44025065-44024917 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:149
               
               
               Alignm identity:125
               
               
               Alignm E-value:9e-38
               
               
               Alignm gaps (pig, cow):127, 0

               
               
               Conread position:571-699
               
               
               Cow position:chr4:53447912-53447791 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:129
               
               
               Alignm identity:105
               
               
               Alignm E-value:7e-25
               
               
               Alignm gaps (pig, cow):79, 0

               
               
               Conread position:571-717
               
               
               Cow position:chr4:11897545-11897402 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:148
               
               
               Alignm identity:118
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):126, 109

               
               
               Conread position:572-712
               
               
               Cow position:chr4:19430071-19430212 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:144
               
               
               Alignm identity:110
               
               
               Alignm E-value:6e-23
               
               
               Alignm gaps (pig, cow):72, 104

               
               
               Conread position:572-712
               
               
               Cow position:chr4:26659060-26659195 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:141
               
               
               Alignm identity:113
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):42, 0

               
               
               Conread position:572-712
               
               
               Cow position:chr4:41602604-41602740 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:142
               
               
               Alignm identity:108
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):98, 13

               
               
               Conread position:572-717
               
               
               Cow position:chr4:46370565-46370711 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:147
               
               
               Alignm identity:127
               
               
               Alignm E-value:9.99995e-41
               
               
               Alignm gaps (pig, cow):124, 0

               
               
               Conread position:574-702
               
               
               Cow position:chr4:12127886-12127761 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:129
               
               
               Alignm identity:101
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):93, 0

               
               
               Conread position:574-717
               
               
               Cow position:chr4:16091643-16091502 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:145
               
               
               Alignm identity:115
               
               
               Alignm E-value:3e-28
               
               
               Alignm gaps (pig, cow):133, 93

               
               
               Conread position:575-712
               
               
               Cow position:chr4:58881209-58881072 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:138
               
               
               Alignm identity:117
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:580-699
               
               
               Cow position:chr4:23911826-23911708 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:120
               
               
               Alignm identity:95
               
               
               Alignm E-value:6e-23
               
               
               Alignm gaps (pig, cow):31, 0

               
               
               Conread position:580-717
               
               
               Cow position:chr4:25356543-25356411 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:138
               
               
               Alignm identity:107
               
               
               Alignm E-value:6e-23
               
               
               Alignm gaps (pig, cow):98, 0

               
               
               Conread position:581-698
               
               
               Cow position:chr4:14964544-14964658 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:118
               
               
               Alignm identity:93
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):25, 0

               
               
               Conread position:582-717
               
               
               Cow position:chr4:19463255-19463391 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:137
               
               
               Alignm identity:111
               
               
               Alignm E-value:4e-30
               
               
               Alignm gaps (pig, cow):21, 0

               
               
               Conread position:583-717
               
               
               Cow position:chr4:41908026-41907896 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:135
               
               
               Alignm identity:114
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):67, 0

               
               
               Conread position:584-701
               
               
               Cow position:chr4:34337503-34337387 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:118
               
               
               Alignm identity:99
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):73, 0

               
               
               Conread position:585-712
               
               
               Cow position:chr4:56435573-56435699 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:128
               
               
               Alignm identity:102
               
               
               Alignm E-value:8e-26
               
               
               Alignm gaps (pig, cow):41, 0

               
               
               Conread position:585-717
               
               
               Cow position:chr4:43750044-43749912 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:133
               
               
               Alignm identity:99
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:589-683
               
               
               Cow position:chr4:36290379-36290473 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:95
               
               
               Alignm identity:80
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:595-712
               
               
               Cow position:chr4:34924915-34924797 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:119
               
               
               Alignm identity:94
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):111, 0

               
               
               Conread position:595-715
               
               
               Cow position:chr4:51083584-51083464 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:121
               
               
               Alignm identity:98
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:597-712
               
               
               Cow position:chr4:59277700-59277585 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:116
               
               
               Alignm identity:96
               
               
               Alignm E-value:9e-27
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:599-712
               
               
               Cow position:chr4:38935140-38935247 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:114
               
               
               Alignm identity:97
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):61, 0

               
               
               Conread position:607-717
               
               
               Cow position:chr4:13608029-13608140 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:112
               
               
               Alignm identity:90
               
               
               Alignm E-value:5e-22
               
               
               Alignm gaps (pig, cow):99, 0

               
               
               Conread position:610-710
               
               
               Cow position:chr4:56413373-56413271 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:103
               
               
               Alignm identity:86
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):84, 0

               
               
               Conread position:610-712
               
               
               Cow position:chr4:1026436-1026334 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:103
               
               
               Alignm identity:84
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:614-717
               
               
               Cow position:chr4:13344338-13344442 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:105
               
               
               Alignm identity:87
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):30, 0
Show alignments to all cow chromosomes.
Conread position:	4-699
Cow position:	chr4:62654495-62653802 (view UCSC Genome Browser custom track)
Alignm length:	696
Alignm identity:	199
Alignm E-value:	4.00001e-41
Alignm gaps (pig, cow):	545, 0
Conread position:	291-699
Cow position:	chr4:10534033-10533628 (view UCSC Genome Browser custom track)
Alignm length:	409
Alignm identity:	175
Alignm E-value:	3e-36
Alignm gaps (pig, cow):	258, 0
Conread position:	351-695
Cow position:	chr4:20474-20792 (view UCSC Genome Browser custom track)
Alignm length:	345
Alignm identity:	241
Alignm E-value:	8e-37
Alignm gaps (pig, cow):	51, 0
Conread position:	370-717
Cow position:	chr4:19558294-19558615 (view UCSC Genome Browser custom track)
Alignm length:	352
Alignm identity:	251
Alignm E-value:	3e-39
Alignm gaps (pig, cow):	170, 20
Conread position:	372-699
Cow position:	chr4:53701099-53701409 (view UCSC Genome Browser custom track)
Alignm length:	328
Alignm identity:	228
Alignm E-value:	1e-38
Alignm gaps (pig, cow):	59, 0
Conread position:	373-639
Cow position:	chr4:53125706-53125959 (view UCSC Genome Browser custom track)
Alignm length:	267
Alignm identity:	191
Alignm E-value:	3e-37
Alignm gaps (pig, cow):	42, 0
Conread position:	373-699
Cow position:	chr4:38799625-38799316 (view UCSC Genome Browser custom track)
Alignm length:	328
Alignm identity:	243
Alignm E-value:	0
Alignm gaps (pig, cow):	99, 35
Conread position:	374-541
Cow position:	chr4:16143459-16143621 (view UCSC Genome Browser custom track)
Alignm length:	168
Alignm identity:	121
Alignm E-value:	6e-23
Alignm gaps (pig, cow):	78, 0
Conread position:	374-543
Cow position:	chr4:36755294-36755451 (view UCSC Genome Browser custom track)
Alignm length:	170
Alignm identity:	127
Alignm E-value:	5e-22
Alignm gaps (pig, cow):	25, 0
Conread position:	374-641
Cow position:	chr4:42278672-42278407 (view UCSC Genome Browser custom track)
Alignm length:	271
Alignm identity:	198
Alignm E-value:	2.00386e-43
Alignm gaps (pig, cow):	81, 39
Conread position:	374-658
Cow position:	chr4:30170820-30170547 (view UCSC Genome Browser custom track)
Alignm length:	288
Alignm identity:	213
Alignm E-value:	1.96182e-44
Alignm gaps (pig, cow):	59, 153
Conread position:	374-696
Cow position:	chr4:28378076-28377778 (view UCSC Genome Browser custom track)
Alignm length:	325
Alignm identity:	245
Alignm E-value:	0
Alignm gaps (pig, cow):	157, 34
Conread position:	374-699
Cow position:	chr4:23494486-23494809 (view UCSC Genome Browser custom track)
Alignm length:	331
Alignm identity:	224
Alignm E-value:	8e-37
Alignm gaps (pig, cow):	47, 210
Conread position:	374-702
Cow position:	chr4:6166762-6166449 (view UCSC Genome Browser custom track)
Alignm length:	332
Alignm identity:	226
Alignm E-value:	6e-34
Alignm gaps (pig, cow):	52, 92
Conread position:	374-704
Cow position:	chr4:11309180-11309512 (view UCSC Genome Browser custom track)
Alignm length:	339
Alignm identity:	222
Alignm E-value:	4e-29
Alignm gaps (pig, cow):	108, 70
Conread position:	374-717
Cow position:	chr4:21392238-21391917 (view UCSC Genome Browser custom track)
Alignm length:	346
Alignm identity:	262
Alignm E-value:	0
Alignm gaps (pig, cow):	63, 51
Conread position:	375-699
Cow position:	chr4:16736081-16736382 (view UCSC Genome Browser custom track)
Alignm length:	325
Alignm identity:	241
Alignm E-value:	0
Alignm gaps (pig, cow):	51, 0
Conread position:	378-702
Cow position:	chr4:54146916-54146595 (view UCSC Genome Browser custom track)
Alignm length:	337
Alignm identity:	228
Alignm E-value:	4e-29
Alignm gaps (pig, cow):	65, 24
Conread position:	379-649
Cow position:	chr4:38467186-38467446 (view UCSC Genome Browser custom track)
Alignm length:	271
Alignm identity:	193
Alignm E-value:	9e-38
Alignm gaps (pig, cow):	26, 0
Conread position:	380-704
Cow position:	chr4:18519304-18519614 (view UCSC Genome Browser custom track)
Alignm length:	325
Alignm identity:	219
Alignm E-value:	2e-35
Alignm gaps (pig, cow):	64, 0