Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8028E13.5
        

               Conread position:
               65-191
               

               Cow position:
               chr5:61186008-61186134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               189-292
               

               Cow position:
               chr5:61190218-61190321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               290-444
               

               Cow position:
               chr5:61190597-61190751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               146
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               442-561
               

               Cow position:
               chr5:61190933-61191052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               559-638
               

               Cow position:
               chr5:61191128-61191207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               80
               

               Alignm identity:
               77
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               624-779
               

               Cow position:
               chr5:61192279-61192433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               135
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               776-1284
               

               Cow position:
               chr5:61192559-61193095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               546
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 283
               
Show alignments to all cow chromosomes.