Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8028O07.5 |
| Conread position: | 437-698 |
| Cow position: | chr13:9559292-9559570 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 75, 6 |
| Conread position: | 446-717 |
| Cow position: | chr13:27068153-27067868 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 197 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 78, 127 |
| Conread position: | 446-749 |
| Cow position: | chr13:20977108-20977427 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 446-750 |
| Cow position: | chr13:52799908-52799597 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 86, 27 |
| Conread position: | 446-753 |
| Cow position: | chr13:22701771-22701459 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 70, 56 |
| Conread position: | 446-760 |
| Cow position: | chr13:49355713-49355385 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 66, 122 |
| Conread position: | 446-773 |
| Cow position: | chr13:54900096-54899763 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 57, 50 |
| Conread position: | 446-777 |
| Cow position: | chr13:5925610-5925275 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 229 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 89, 56 |
| Conread position: | 448-692 |
| Cow position: | chr13:6383212-6383476 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 450-674 |
| Cow position: | chr13:44985539-44985775 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 60, 52 |
| Conread position: | 522-767 |
| Cow position: | chr13:42717669-42717420 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 29, 87 |
| Conread position: | 530-738 |
| Cow position: | chr13:57431036-57431251 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 21, 163 |
| Conread position: | 530-748 |
| Cow position: | chr13:47570853-47570637 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 21, 74 |
| Conread position: | 531-718 |
| Cow position: | chr13:33923823-33924008 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 66, 18 |
| Conread position: | 531-748 |
| Cow position: | chr13:4045582-4045362 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 20, 147 |
| Conread position: | 531-832 |
| Cow position: | chr13:11319645-11319338 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 20, 159 |
| Conread position: | 532-737 |
| Cow position: | chr13:15296480-15296270 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 19, 201 |
| Conread position: | 536-748 |
| Cow position: | chr13:26025003-26024785 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 537-738 |
| Cow position: | chr13:9298261-9298054 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 14, 131 |
| Conread position: | 552-750 |
| Cow position: | chr13:12708150-12707949 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 565-767 |
| Cow position: | chr13:53856902-53857101 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 149, 106 |
| Conread position: | 570-767 |
| Cow position: | chr13:48434538-48434339 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 98, 121 |
| Conread position: | 579-750 |
| Cow position: | chr13:55667268-55667095 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 582-766 |
| Cow position: | chr13:41398406-41398219 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 596-748 |
| Cow position: | chr13:11243237-11243391 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 75, 0 |
Show alignments to all cow chromosomes.