Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8028O07.5 |
| Conread position: | 430-804 |
| Cow position: | chr18:51242530-51242152 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 236 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 124, 82 |
| Conread position: | 443-764 |
| Cow position: | chr18:7085634-7085294 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 239 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 63, 17 |
| Conread position: | 446-766 |
| Cow position: | chr18:19683057-19683382 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 66, 93 |
| Conread position: | 446-773 |
| Cow position: | chr18:37873677-37874032 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 66, 20 |
| Conread position: | 446-791 |
| Cow position: | chr18:20043775-20043411 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 68, 29 |
| Conread position: | 483-750 |
| Cow position: | chr18:14823833-14823565 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 27, 11 |
| Conread position: | 496-766 |
| Cow position: | chr18:10663378-10663094 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 530-750 |
| Cow position: | chr18:12276916-12276692 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 21, 161 |
| Conread position: | 531-728 |
| Cow position: | chr18:14140271-14140470 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 23, 116 |
| Conread position: | 531-749 |
| Cow position: | chr18:158635-158860 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 20, 144 |
| Conread position: | 531-757 |
| Cow position: | chr18:49782937-49783167 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 20, 120 |
| Conread position: | 531-767 |
| Cow position: | chr18:17757264-17757508 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 20, 97 |
| Conread position: | 531-767 |
| Cow position: | chr18:32323904-32323664 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 20, 218 |
| Conread position: | 531-767 |
| Cow position: | chr18:37868882-37869119 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 20, 115 |
| Conread position: | 531-770 |
| Cow position: | chr18:39751748-39751996 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 20, 14 |
| Conread position: | 536-769 |
| Cow position: | chr18:1658603-1658839 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 15, 70 |
| Conread position: | 536-784 |
| Cow position: | chr18:51405164-51404919 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 15, 187 |
| Conread position: | 566-750 |
| Cow position: | chr18:36606525-36606345 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 109, 44 |
| Conread position: | 566-765 |
| Cow position: | chr18:50513843-50514044 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 72, 99 |
Show alignments to all cow chromosomes.