Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8028O07.5 |
| Conread position: | 422-750 |
| Cow position: | chr21:19623256-19622912 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 16, 317 |
| Conread position: | 429-757 |
| Cow position: | chr21:14121300-14121641 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 71, 284 |
| Conread position: | 445-759 |
| Cow position: | chr21:39385369-39385692 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 88, 69 |
| Conread position: | 446-708 |
| Cow position: | chr21:34618218-34617937 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 446-748 |
| Cow position: | chr21:36620314-36620637 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 222 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 46, 24 |
| Conread position: | 446-759 |
| Cow position: | chr21:2404820-2404488 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 61, 189 |
| Conread position: | 446-759 |
| Cow position: | chr21:29975772-29976095 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 90, 76 |
| Conread position: | 461-700 |
| Cow position: | chr21:15320035-15320280 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 72, 51 |
| Conread position: | 522-769 |
| Cow position: | chr21:20230846-20231093 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 29, 22 |
| Conread position: | 531-728 |
| Cow position: | chr21:12314040-12313837 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 531-748 |
| Cow position: | chr21:40617884-40618106 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 23, 10 |
| Conread position: | 531-749 |
| Cow position: | chr21:19349211-19349434 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 531-759 |
| Cow position: | chr21:11326882-11327110 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 22, 57 |
| Conread position: | 531-767 |
| Cow position: | chr21:15933417-15933172 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 20, 73 |
| Conread position: | 531-768 |
| Cow position: | chr21:2178536-2178772 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 20, 30 |
| Conread position: | 531-805 |
| Cow position: | chr21:9968110-9968392 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 533-746 |
| Cow position: | chr21:19652366-19652586 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 536-773 |
| Cow position: | chr21:13432269-13432509 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 37, 11 |
| Conread position: | 566-768 |
| Cow position: | chr21:40726248-40726452 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 566-773 |
| Cow position: | chr21:39797506-39797299 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 19, 191 |
| Conread position: | 568-750 |
| Cow position: | chr21:22724300-22724484 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 12, 25 |
| Conread position: | 570-752 |
| Cow position: | chr21:46556892-46557073 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 148, 109 |
| Conread position: | 577-749 |
| Cow position: | chr21:29912345-29912519 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 98, 9 |
| Conread position: | 581-767 |
| Cow position: | chr21:34236095-34235907 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 581-796 |
| Cow position: | chr21:41731395-41731613 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 94, 207 |
Show alignments to all cow chromosomes.