Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8028O07.5 |
| Conread position: | 418-768 |
| Cow position: | chr22:45606504-45606870 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 23, 12 |
| Conread position: | 429-728 |
| Cow position: | chr22:29966712-29967028 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 95, 14 |
| Conread position: | 434-721 |
| Cow position: | chr22:12158264-12158556 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 93, 214 |
| Conread position: | 443-765 |
| Cow position: | chr22:39704876-39704551 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 63, 107 |
| Conread position: | 446-678 |
| Cow position: | chr22:24733183-24732930 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 446-701 |
| Cow position: | chr22:4637791-4638051 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 88, 79 |
| Conread position: | 446-749 |
| Cow position: | chr22:12690976-12691287 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 92, 62 |
| Conread position: | 446-750 |
| Cow position: | chr22:11252334-11252038 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 66, 32 |
| Conread position: | 446-766 |
| Cow position: | chr22:10676924-10677252 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 77, 52 |
| Conread position: | 446-768 |
| Cow position: | chr22:30065350-30065677 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 222 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 70, 49 |
| Conread position: | 446-772 |
| Cow position: | chr22:33587723-33587384 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 61, 216 |
| Conread position: | 446-793 |
| Cow position: | chr22:4995816-4996172 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 43, 139 |
| Conread position: | 450-777 |
| Cow position: | chr22:8195278-8194932 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 241 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 62, 326 |
| Conread position: | 530-767 |
| Cow position: | chr22:18218329-18218574 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 21, 74 |
| Conread position: | 530-767 |
| Cow position: | chr22:34016806-34017050 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 21, 11 |
| Conread position: | 530-785 |
| Cow position: | chr22:25211101-25211361 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 23, 201 |
| Conread position: | 531-730 |
| Cow position: | chr22:16110831-16111035 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 20, 59 |
| Conread position: | 531-748 |
| Cow position: | chr22:8966923-8967140 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 20, 50 |
| Conread position: | 531-767 |
| Cow position: | chr22:10186586-10186345 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 20, 159 |
| Conread position: | 531-768 |
| Cow position: | chr22:23104711-23104952 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 531-777 |
| Cow position: | chr22:44654414-44654165 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 20, 97 |
| Conread position: | 531-793 |
| Cow position: | chr22:13610225-13610485 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 20, 61 |
| Conread position: | 532-749 |
| Cow position: | chr22:18040127-18039906 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 17, 10 |
| Conread position: | 533-750 |
| Cow position: | chr22:35692025-35692240 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 18, 78 |
| Conread position: | 536-670 |
| Cow position: | chr22:21805871-21806009 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 536-749 |
| Cow position: | chr22:41870543-41870326 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 17, 111 |
| Conread position: | 539-767 |
| Cow position: | chr22:46355506-46355732 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 34, 96 |
| Conread position: | 566-746 |
| Cow position: | chr22:42722709-42722891 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 566-750 |
| Cow position: | chr22:12036917-12037102 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 19, 36 |
| Conread position: | 579-780 |
| Cow position: | chr22:17183461-17183260 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 17, 184 |
| Conread position: | 581-773 |
| Cow position: | chr22:14490982-14490790 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 581-776 |
| Cow position: | chr22:25202011-25201813 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 94, 25 |
| Conread position: | 582-767 |
| Cow position: | chr22:46184370-46184185 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 14, 29 |
Show alignments to all cow chromosomes.