Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8028O07.5
        

               Conread position:
               445-766
               

               Cow position:
               chr29:12292511-12292845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               72, 204
               

               Conread position:
               446-717
               

               Cow position:
               chr29:13093897-13093607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               446-740
               

               Cow position:
               chr29:34332416-34332709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               81, 101
               

               Conread position:
               446-749
               

               Cow position:
               chr29:33549369-33549691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               447-777
               

               Cow position:
               chr29:33553327-33552989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               65, 47
               

               Conread position:
               525-708
               

               Cow position:
               chr29:29298649-29298460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               26, 116
               

               Conread position:
               531-664
               

               Cow position:
               chr29:20923192-20923329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               566-734
               

               Cow position:
               chr29:39372528-39372357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               19, 0
               
Show alignments to all cow chromosomes.