Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8028O07.5 |
| Conread position: | 55-350 |
| Cow position: | chr9:24884142-24884448 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 175 |
| Conread position: | 422-738 |
| Cow position: | chr9:47939844-47939515 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 425-718 |
| Cow position: | chr9:21459919-21459615 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 18, 164 |
| Conread position: | 434-814 |
| Cow position: | chr9:20226187-20226591 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 265 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 6, 118 |
| Conread position: | 439-677 |
| Cow position: | chr9:52529648-52529394 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 11, 244 |
| Conread position: | 446-750 |
| Cow position: | chr9:53977770-53977456 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 207 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 85, 68 |
| Conread position: | 446-768 |
| Cow position: | chr9:35747553-35747899 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 70, 133 |
| Conread position: | 446-769 |
| Cow position: | chr9:21229079-21228763 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 66, 84 |
| Conread position: | 446-769 |
| Cow position: | chr9:42930694-42931029 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 70, 27 |
| Conread position: | 446-773 |
| Cow position: | chr9:48755866-48755532 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 227 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 57, 176 |
| Conread position: | 446-796 |
| Cow position: | chr9:12389013-12389373 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 47, 190 |
| Conread position: | 457-768 |
| Cow position: | chr9:49619986-49619666 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 53, 210 |
| Conread position: | 511-747 |
| Cow position: | chr9:48069038-48068794 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 30, 146 |
| Conread position: | 530-765 |
| Cow position: | chr9:5880325-5880080 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 530-767 |
| Cow position: | chr9:5211518-5211273 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 29, 122 |
| Conread position: | 531-709 |
| Cow position: | chr9:64297133-64296952 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 20, 160 |
| Conread position: | 531-766 |
| Cow position: | chr9:55634917-55635152 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 20, 187 |
| Conread position: | 531-767 |
| Cow position: | chr9:13115695-13115939 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 20, 171 |
| Conread position: | 531-768 |
| Cow position: | chr9:24885027-24885265 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 104 |
| Conread position: | 531-769 |
| Cow position: | chr9:20170385-20170620 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 20, 32 |
| Conread position: | 531-849 |
| Cow position: | chr9:34956070-34956391 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 228 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 42, 28 |
| Conread position: | 532-772 |
| Cow position: | chr9:51592609-51592364 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 19, 78 |
| Conread position: | 556-750 |
| Cow position: | chr9:29237222-29237417 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 119, 183 |
| Conread position: | 571-750 |
| Cow position: | chr9:9458763-9458944 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 104, 0 |
Show alignments to all cow chromosomes.