Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8028O18.3
        

               Conread position:
               4-149
               

               Cow position:
               chr1:52246297-52246444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               13, 29
               

               Conread position:
               130-284
               

               Cow position:
               chr1:49529021-49529176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               124, 10
               

               Conread position:
               295-499
               

               Cow position:
               chr1:52249510-52249715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               161
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               297-497
               

               Cow position:
               chr1:49531674-49531881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               163
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               525-634
               

               Cow position:
               chr1:52249721-52249831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               90
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               689-927
               

               Cow position:
               chr1:52249830-52250060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               185
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               90, 23
               

               Conread position:
               781-1073
               

               Cow position:
               chr1:49531980-49532278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               221
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               177, 122
               

               Conread position:
               1002-1152
               

               Cow position:
               chr1:52250059-52250213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               55, 33
               
Show alignments to all cow chromosomes.