Cow genome map

Conread name: Ss1.1-Pig4-TMW8029I24.3

Conread position: 72-644
Cow position: chr1:41007969-41007407 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 376
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 135, 48

Conread position: 74-542
Cow position: chr1:24204896-24205355 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 321
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 65, 37

Conread position: 77-484
Cow position: chr1:87858611-87858210 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 282
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 54, 70

Conread position: 90-534
Cow position: chr1:25551220-25550770 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 280
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 42, 184

Conread position: 124-434
Cow position: chr1:5548541-5548846 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 201
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 207, 12

Conread position: 129-618
Cow position: chr1:31371759-31372251 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 316
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 128, 95

Conread position: 130-418
Cow position: chr1:3934044-3934335 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 188
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 83, 91

Conread position: 130-428
Cow position: chr1:72185668-72185967 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 197
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 261, 139

Conread position: 130-440
Cow position: chr1:91891907-91892215 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 200
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 261, 119

Conread position: 130-534
Cow position: chr1:86595280-86595687 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 258
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 147, 286

Conread position: 130-546
Cow position: chr1:66105123-66104704 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 271
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 261, 97

Conread position: 130-573
Cow position: chr1:98658695-98659138 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 279
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 164, 19

Conread position: 131-418
Cow position: chr1:3384810-3385099 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 187
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 82, 90

Conread position: 133-418
Cow position: chr1:65387532-65387245 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 187
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 30, 11

Conread position: 136-418
Cow position: chr1:52358051-52358333 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 184
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 255, 84

Conread position: 136-446
Cow position: chr1:16216468-16216775 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 202
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 78, 74

Conread position: 136-510
Cow position: chr1:59388179-59387807 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 236
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 24, 173

Conread position: 136-516
Cow position: chr1:65923489-65923863 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 251
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 30, 20

Conread position: 136-540
Cow position: chr1:82070943-82070545 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 111

Conread position: 137-473
Cow position: chr1:7141581-7141915 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 210
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 94, 122

Conread position: 137-541
Cow position: chr1:43406599-43406198 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 278
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 74, 48

Conread position: 138-415
Cow position: chr1:30533815-30534092 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 176
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 253, 131

Conread position: 138-415
Cow position: chr1:56192958-56193242 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 184
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 138-415
Cow position: chr1:102433836-102434112 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 186
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 253, 41

Conread position: 138-418
Cow position: chr1:63604566-63604851 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 184
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 141, 0

Conread position: 138-418
Cow position: chr1:69921228-69921509 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 182
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 253, 0

Conread position: 138-418
Cow position: chr1:85779238-85779521 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 183
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 107, 0

Conread position: 138-418
Cow position: chr1:93855723-93855442 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 183
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 49, 83

Conread position: 138-418
Cow position: chr1:99914632-99914349 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 184
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 248, 0

Conread position: 138-428
Cow position: chr1:79455748-79456036 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 191
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 280, 236

Conread position: 138-464
Cow position: chr1:76620474-76620802 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 211
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 132, 32

Conread position: 138-516
Cow position: chr1:8826251-8825874 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 243
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 215, 41

Conread position: 138-522
Cow position: chr1:33552133-33551747 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 244
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 253, 276

Conread position: 138-534
Cow position: chr1:26517681-26518077 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 246
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 343, 248

Conread position: 138-534
Cow position: chr1:30282493-30282892 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 251
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 158, 277

Conread position: 138-534
Cow position: chr1:49972977-49973379 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 254
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 39, 280

Conread position: 138-534
Cow position: chr1:56143129-56143523 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 248
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 31, 122

Conread position: 138-534
Cow position: chr1:57423628-57424032 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 248
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 127, 282

Conread position: 138-534
Cow position: chr1:61310427-61310028 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 256
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 253, 288

Conread position: 138-534
Cow position: chr1:85792885-85792487 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 240
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 253, 276

Conread position: 138-534
Cow position: chr1:86546931-86547333 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 250
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 132, 279

Conread position: 138-534
Cow position: chr1:94660880-94660484 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 251
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 253, 181

Conread position: 138-544
Cow position: chr1:28874283-28873879 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 252
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 253, 33

Conread position: 138-544
Cow position: chr1:74285583-74285991 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 258
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 253, 276

Conread position: 138-547
Cow position: chr1:12061007-12061418 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 251
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 141, 47

Conread position: 139-403
Cow position: chr1:70419177-70419439 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 173
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 66, 70

Conread position: 139-418
Cow position: chr1:48247045-48246762 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 180
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 131, 0

Conread position: 139-433
Cow position: chr1:73197819-73198113 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 190
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 79, 92

Conread position: 139-480
Cow position: chr1:5265405-5265740 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 221
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 137, 39

Conread position: 142-433
Cow position: chr1:101860867-101861151 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 189
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 250, 90

Conread position: 144-342
Cow position: chr1:39882305-39882110 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 135
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 149-479
Cow position: chr1:17011539-17011866 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 203
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 51, 102

Conread position: 149-488
Cow position: chr1:20525672-20525333 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 211
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 204, 267

Conread position: 149-534
Cow position: chr1:29363496-29363106 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 247
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 104, 272

Conread position: 149-534
Cow position: chr1:55777775-55777392 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 240
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 242, 30

Conread position: 149-534
Cow position: chr1:69404195-69403815 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 244
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 242, 17

Conread position: 152-534
Cow position: chr1:31397883-31397500 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 248
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 201, 107

Conread position: 152-544
Cow position: chr1:99528451-99528854 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 264
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 66, 39

Conread position: 154-418
Cow position: chr1:97675045-97675308 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 190
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 154, 31

Conread position: 154-439
Cow position: chr1:40683552-40683837 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 183
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 237, 105

Conread position: 154-591
Cow position: chr1:9560715-9560283 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 292
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 39, 124

Conread position: 157-399
Cow position: chr1:82905539-82905293 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 166
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 150, 46

Conread position: 157-418
Cow position: chr1:25178842-25179104 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 173
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 192, 112

Conread position: 157-434
Cow position: chr1:39213928-39214197 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 203
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 45, 106

Conread position: 157-539
Cow position: chr1:35034709-35034344 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 244
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 113, 58

Conread position: 159-539
Cow position: chr1:33883513-33883127 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 246
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 75, 48

Conread position: 160-418
Cow position: chr1:59648475-59648217 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 179
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 15, 67

Conread position: 162-504
Cow position: chr1:44150576-44150240 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 228
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 172, 23

Conread position: 166-455
Cow position: chr1:29608512-29608796 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 199
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 225, 5

Conread position: 170-596
Cow position: chr1:43045049-43045469 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 278
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 193, 79

Conread position: 171-405
Cow position: chr1:67079155-67079388 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 156
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 220, 57

Conread position: 172-418
Cow position: chr1:74860379-74860137 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 162
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 219, 38

Conread position: 174-539
Cow position: chr1:86566746-86567108 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 232
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 175, 84

Conread position: 181-418
Cow position: chr1:76544372-76544610 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 156
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 209, 0

Conread position: 181-485
Cow position: chr1:88269072-88269377 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 202
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 208, 103

Conread position: 181-534
Cow position: chr1:33852450-33852094 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 221
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 188, 6

Conread position: 181-534
Cow position: chr1:82911975-82912329 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 223
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 210, 6

Conread position: 182-428
Cow position: chr1:21998794-21999039 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 166
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 210, 150

Conread position: 182-534
Cow position: chr1:40575378-40575022 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 231
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 88, 160

Conread position: 187-418
Cow position: chr1:60933281-60933514 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 156
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 70, 181

Conread position: 188-541
Cow position: chr1:42078794-42078449 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 239
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 207, 78

Conread position: 194-415
Cow position: chr1:76486803-76487025 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 152
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 16, 128

Conread position: 194-516
Cow position: chr1:42737608-42737284 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 207
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 197, 220

Conread position: 197-542
Cow position: chr1:88212654-88212992 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 240
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 64, 108

Conread position: 201-430
Cow position: chr1:31771534-31771306 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 153
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 206, 0

Conread position: 207-540
Cow position: chr1:21691101-21691432 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 217
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 184, 7

Conread position: 220-533
Cow position: chr1:56773571-56773885 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 198
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 171, 18

Conread position: 231-751
Cow position: chr1:40643373-40642852 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 351
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 33, 118

Conread position: 237-516
Cow position: chr1:30539231-30539513 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 206
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 41, 32

Show alignments to all cow chromosomes.