Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8029I24.3 |
| Conread position: | 59-530 |
| Cow position: | chr10:56967533-56967076 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 307 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 294, 15 |
| Conread position: | 68-425 |
| Cow position: | chr10:17197060-17197427 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 245 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 66, 215 |
| Conread position: | 72-480 |
| Cow position: | chr10:44102455-44102056 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 272 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 40, 31 |
| Conread position: | 74-434 |
| Cow position: | chr10:57502122-57501754 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 46, 41 |
| Conread position: | 75-441 |
| Cow position: | chr10:59545064-59544698 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 246 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 64, 55 |
| Conread position: | 99-587 |
| Cow position: | chr10:47965653-47966131 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 325 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 58, 25 |
| Conread position: | 130-430 |
| Cow position: | chr10:42752368-42752068 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 93, 129 |
| Conread position: | 136-357 |
| Cow position: | chr10:487091-487312 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 176, 190 |
| Conread position: | 136-415 |
| Cow position: | chr10:7721526-7721804 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 103, 43 |
| Conread position: | 136-418 |
| Cow position: | chr10:10797857-10798148 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 136-439 |
| Cow position: | chr10:13220199-13220499 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 54, 100 |
| Conread position: | 136-532 |
| Cow position: | chr10:41878151-41877750 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 135, 292 |
| Conread position: | 136-540 |
| Cow position: | chr10:46494675-46495072 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 266 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 204, 21 |
| Conread position: | 136-544 |
| Cow position: | chr10:38537268-38537675 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 252 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 147, 198 |
| Conread position: | 136-725 |
| Cow position: | chr10:34683509-34682919 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 385 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 330, 58 |
| Conread position: | 138-436 |
| Cow position: | chr10:32701954-32701656 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 215, 190 |
| Conread position: | 138-531 |
| Cow position: | chr10:16926759-16926369 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 141, 203 |
| Conread position: | 138-534 |
| Cow position: | chr10:1665305-1665701 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 253, 276 |
| Conread position: | 138-534 |
| Cow position: | chr10:2119787-2120180 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 256 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 253, 146 |
| Conread position: | 138-534 |
| Cow position: | chr10:44708385-44708784 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 250 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 132, 80 |
| Conread position: | 138-535 |
| Cow position: | chr10:21739521-21739919 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 256, 19 |
| Conread position: | 138-544 |
| Cow position: | chr10:14334619-14335027 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 260 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 253, 276 |
| Conread position: | 138-547 |
| Cow position: | chr10:29845418-29845829 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 253 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 253, 284 |
| Conread position: | 139-418 |
| Cow position: | chr10:33570904-33570625 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 111, 200 |
| Conread position: | 139-487 |
| Cow position: | chr10:4323752-4323409 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 232 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 46, 90 |
| Conread position: | 139-517 |
| Cow position: | chr10:43865513-43865886 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 252, 40 |
| Conread position: | 140-470 |
| Cow position: | chr10:13007989-13007672 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 144-539 |
| Cow position: | chr10:23138514-23138134 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 258 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 5, 64 |
| Conread position: | 147-412 |
| Cow position: | chr10:10719966-10720226 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 26, 73 |
| Conread position: | 149-410 |
| Cow position: | chr10:57988776-57989040 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 149-412 |
| Cow position: | chr10:38344141-38344405 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 243, 0 |
| Conread position: | 152-522 |
| Cow position: | chr10:1378718-1378350 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 239, 62 |
| Conread position: | 152-539 |
| Cow position: | chr10:6662398-6662769 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 244 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 246, 7 |
| Conread position: | 152-540 |
| Cow position: | chr10:51211156-51210772 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 19 |
| Conread position: | 152-545 |
| Cow position: | chr10:51843801-51843409 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 261 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 13, 49 |
| Conread position: | 159-436 |
| Cow position: | chr10:58674366-58674637 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 12, 40 |
| Conread position: | 159-450 |
| Cow position: | chr10:9945073-9945357 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 11, 41 |
| Conread position: | 159-536 |
| Cow position: | chr10:39304523-39304897 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 255 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 15, 220 |
| Conread position: | 160-538 |
| Cow position: | chr10:23439951-23440335 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 255 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 191, 106 |
| Conread position: | 176-359 |
| Cow position: | chr10:63984562-63984380 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 178-534 |
| Cow position: | chr10:24976584-24976933 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 213, 79 |
| Conread position: | 181-446 |
| Cow position: | chr10:19544196-19544455 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 159, 16 |
| Conread position: | 182-539 |
| Cow position: | chr10:49652669-49653035 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 131, 11 |
| Conread position: | 194-534 |
| Cow position: | chr10:19495106-19495448 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 83, 229 |
| Conread position: | 194-534 |
| Cow position: | chr10:21399496-21399839 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 76, 222 |
| Conread position: | 224-535 |
| Cow position: | chr10:15746877-15747186 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 168, 37 |
| Conread position: | 232-535 |
| Cow position: | chr10:7463322-7463620 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 205 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 159, 73 |
| Conread position: | 253-418 |
| Cow position: | chr10:34908472-34908308 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 138, 64 |
| Conread position: | 287-544 |
| Cow position: | chr10:59861608-59861350 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 104, 62 |
Show alignments to all cow chromosomes.