Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8029I24.3 |
| Conread position: | 47-458 |
| Cow position: | chr14:21869846-21870255 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 258 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 58, 25 |
| Conread position: | 63-531 |
| Cow position: | chr14:20971308-20971766 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 305 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 117, 19 |
| Conread position: | 73-541 |
| Cow position: | chr14:20917772-20917296 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 313 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 66, 164 |
| Conread position: | 90-428 |
| Cow position: | chr14:11153290-11153639 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 219 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 125-516 |
| Cow position: | chr14:9099898-9100289 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 27, 35 |
| Conread position: | 126-534 |
| Cow position: | chr14:48253492-48253899 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 87, 54 |
| Conread position: | 130-479 |
| Cow position: | chr14:751383-751036 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 261, 64 |
| Conread position: | 130-533 |
| Cow position: | chr14:27978178-27977772 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 252 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 261, 128 |
| Conread position: | 130-728 |
| Cow position: | chr14:22030627-22031230 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 355 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 150, 285 |
| Conread position: | 135-329 |
| Cow position: | chr14:32532352-32532549 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 84, 150 |
| Conread position: | 136-415 |
| Cow position: | chr14:37225003-37224723 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 255, 0 |
| Conread position: | 136-418 |
| Cow position: | chr14:190779-190496 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 165, 94 |
| Conread position: | 136-418 |
| Cow position: | chr14:1206845-1207128 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 86, 56 |
| Conread position: | 136-418 |
| Cow position: | chr14:33766939-33766654 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 200 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 77, 112 |
| Conread position: | 136-444 |
| Cow position: | chr14:148449-148146 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 244, 82 |
| Conread position: | 136-534 |
| Cow position: | chr14:31804867-31804478 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 258 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 148, 16 |
| Conread position: | 136-714 |
| Cow position: | chr14:21586996-21586425 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 374 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 258, 12 |
| Conread position: | 137-533 |
| Cow position: | chr14:16883032-16883421 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 214, 180 |
| Conread position: | 138-415 |
| Cow position: | chr14:15275423-15275700 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 253, 202 |
| Conread position: | 138-436 |
| Cow position: | chr14:16918908-16919206 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 253, 115 |
| Conread position: | 138-544 |
| Cow position: | chr14:17000248-17000657 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 259 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 49, 277 |
| Conread position: | 138-546 |
| Cow position: | chr14:17686209-17685799 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 253, 276 |
| Conread position: | 138-547 |
| Cow position: | chr14:12742258-12742668 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 258 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 253, 131 |
| Conread position: | 138-709 |
| Cow position: | chr14:13779748-13779156 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 371 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 253, 131 |
| Conread position: | 139-386 |
| Cow position: | chr14:3223333-3223090 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 215, 66 |
| Conread position: | 139-416 |
| Cow position: | chr14:26090139-26089856 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 59, 79 |
| Conread position: | 139-479 |
| Cow position: | chr14:33237829-33237497 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 215 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 129, 39 |
| Conread position: | 149-418 |
| Cow position: | chr14:16272493-16272767 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 149-534 |
| Cow position: | chr14:9046375-9045987 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 251 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 120, 278 |
| Conread position: | 152-382 |
| Cow position: | chr14:3279292-3279063 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 110, 137 |
| Conread position: | 153-541 |
| Cow position: | chr14:21128457-21128082 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 255 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 243, 100 |
| Conread position: | 154-418 |
| Cow position: | chr14:12899886-12899624 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 116, 15 |
| Conread position: | 157-515 |
| Cow position: | chr14:25087277-25087641 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 238 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 13, 115 |
| Conread position: | 175-541 |
| Cow position: | chr14:20909526-20909163 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 238 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 38, 96 |
| Conread position: | 181-444 |
| Cow position: | chr14:5529840-5529568 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 182-534 |
| Cow position: | chr14:29046919-29047273 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 100, 159 |
| Conread position: | 182-534 |
| Cow position: | chr14:33393021-33393375 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 222 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 209, 232 |
| Conread position: | 193-529 |
| Cow position: | chr14:47674584-47674251 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 115, 84 |
| Conread position: | 194-534 |
| Cow position: | chr14:2285094-2284750 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 217 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 76, 222 |
| Conread position: | 198-534 |
| Cow position: | chr14:5512574-5512236 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 193, 216 |
| Conread position: | 220-428 |
| Cow position: | chr14:20932009-20932216 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 171, 45 |
| Conread position: | 261-483 |
| Cow position: | chr14:17051659-17051880 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 130, 153 |
| Conread position: | 541-727 |
| Cow position: | chr14:42421693-42421885 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 99, 47 |
Show alignments to all cow chromosomes.