Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8029I24.3 |
| Conread position: | 130-519 |
| Cow position: | chr17:24028955-24029346 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 244 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 261, 284 |
| Conread position: | 136-336 |
| Cow position: | chr17:14600755-14600566 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 134, 13 |
| Conread position: | 136-415 |
| Cow position: | chr17:15851730-15851452 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 255, 160 |
| Conread position: | 137-425 |
| Cow position: | chr17:14240540-14240252 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 247, 274 |
| Conread position: | 138-434 |
| Cow position: | chr17:4061137-4060841 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 75, 83 |
| Conread position: | 138-455 |
| Cow position: | chr17:6611448-6611764 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 253, 276 |
| Conread position: | 138-522 |
| Cow position: | chr17:6260900-6260512 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 76, 83 |
| Conread position: | 138-531 |
| Cow position: | chr17:15324869-15324475 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 246 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 253, 49 |
| Conread position: | 138-534 |
| Cow position: | chr17:2263147-2262747 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 255 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 132, 98 |
| Conread position: | 138-534 |
| Cow position: | chr17:3655254-3655651 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 343, 275 |
| Conread position: | 138-534 |
| Cow position: | chr17:14215988-14216390 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 191, 282 |
| Conread position: | 138-544 |
| Cow position: | chr17:19267787-19268196 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 257 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 50, 277 |
| Conread position: | 146-519 |
| Cow position: | chr17:13990320-13990686 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 241 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 207, 74 |
| Conread position: | 149-429 |
| Cow position: | chr17:6069582-6069304 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 130, 36 |
| Conread position: | 149-534 |
| Cow position: | chr17:40805839-40805452 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 242, 265 |
| Conread position: | 150-415 |
| Cow position: | chr17:41541899-41541646 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 241, 20 |
| Conread position: | 151-534 |
| Cow position: | chr17:24783187-24782801 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 247 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 191, 107 |
| Conread position: | 152-414 |
| Cow position: | chr17:12978170-12978428 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 26, 69 |
| Conread position: | 152-534 |
| Cow position: | chr17:6120741-6120355 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 243 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 125, 190 |
| Conread position: | 153-534 |
| Cow position: | chr17:11086694-11087079 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 242 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 35, 263 |
| Conread position: | 153-534 |
| Cow position: | chr17:31767015-31767398 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 244 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 238, 261 |
| Conread position: | 156-315 |
| Cow position: | chr17:42313269-42313427 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 27, 13 |
| Conread position: | 159-418 |
| Cow position: | chr17:7942040-7942299 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 35, 119 |
| Conread position: | 159-602 |
| Cow position: | chr17:19961939-19961481 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 304 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 159, 12 |
| Conread position: | 178-535 |
| Cow position: | chr17:3326269-3325933 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 239 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 213, 27 |
| Conread position: | 187-534 |
| Cow position: | chr17:11783831-11783488 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 89, 146 |
| Conread position: | 194-534 |
| Cow position: | chr17:15436777-15436435 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 216 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 197, 232 |
| Conread position: | 195-466 |
| Cow position: | chr17:3707790-3708069 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 17, 178 |
| Conread position: | 246-541 |
| Cow position: | chr17:28001115-28000826 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 78, 87 |
| Conread position: | 340-538 |
| Cow position: | chr17:33831358-33831160 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 9, 15 |
Show alignments to all cow chromosomes.