Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8029I24.3 |
| Conread position: | 54-436 |
| Cow position: | chr19:4386953-4386576 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 17, 34 |
| Conread position: | 73-710 |
| Cow position: | chr19:4369563-4370230 (view UCSC Genome Browser custom track) |
| Alignm length: | 678 |
| Alignm identity: | 425 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 39, 206 |
| Conread position: | 90-418 |
| Cow position: | chr19:5730176-5729846 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 42, 226 |
| Conread position: | 101-401 |
| Cow position: | chr19:2702747-2703040 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 10, 30 |
| Conread position: | 123-539 |
| Cow position: | chr19:44037236-44036825 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 276 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 71, 105 |
| Conread position: | 130-538 |
| Cow position: | chr19:30747495-30747094 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 271 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 69, 21 |
| Conread position: | 133-425 |
| Cow position: | chr19:32181818-32182113 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 17, 11 |
| Conread position: | 136-305 |
| Cow position: | chr19:12678930-12679100 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 136-418 |
| Cow position: | chr19:205241-204954 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 136-418 |
| Cow position: | chr19:8576330-8576605 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 255, 107 |
| Conread position: | 136-456 |
| Cow position: | chr19:11521912-11522228 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 255, 100 |
| Conread position: | 136-477 |
| Cow position: | chr19:38061688-38061344 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 199, 16 |
| Conread position: | 138-415 |
| Cow position: | chr19:2273128-2273409 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 138-418 |
| Cow position: | chr19:438187-438465 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 215, 41 |
| Conread position: | 138-418 |
| Cow position: | chr19:33874679-33874399 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 253, 131 |
| Conread position: | 138-418 |
| Cow position: | chr19:40851196-40851476 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 253, 202 |
| Conread position: | 138-516 |
| Cow position: | chr19:39391762-39391383 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 253, 49 |
| Conread position: | 138-544 |
| Cow position: | chr19:28580409-28580812 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 255 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 151, 195 |
| Conread position: | 139-489 |
| Cow position: | chr19:5162463-5162797 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 236 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 250, 42 |
| Conread position: | 139-489 |
| Cow position: | chr19:35384360-35384706 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 227 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 10, 43 |
| Conread position: | 140-363 |
| Cow position: | chr19:23359902-23359679 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 20, 189 |
| Conread position: | 144-627 |
| Cow position: | chr19:10366148-10365667 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 299 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 247, 92 |
| Conread position: | 148-486 |
| Cow position: | chr19:36732331-36731990 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 229 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 8, 53 |
| Conread position: | 149-415 |
| Cow position: | chr19:12774357-12774091 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 242, 120 |
| Conread position: | 149-418 |
| Cow position: | chr19:33942853-33942578 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 149-471 |
| Cow position: | chr19:20105968-20105647 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 242, 265 |
| Conread position: | 149-534 |
| Cow position: | chr19:28594794-28594407 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 242, 265 |
| Conread position: | 152-418 |
| Cow position: | chr19:7489591-7489318 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 152-534 |
| Cow position: | chr19:5900271-5900646 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 239, 97 |
| Conread position: | 152-534 |
| Cow position: | chr19:7343307-7342923 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 243 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 239, 262 |
| Conread position: | 154-434 |
| Cow position: | chr19:31441747-31441467 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 194 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 52, 258 |
| Conread position: | 157-541 |
| Cow position: | chr19:11952546-11952160 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 234, 257 |
| Conread position: | 160-429 |
| Cow position: | chr19:39923518-39923778 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 76, 11 |
| Conread position: | 161-450 |
| Cow position: | chr19:24834783-24835077 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 26, 61 |
| Conread position: | 188-428 |
| Cow position: | chr19:39184334-39184576 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 165, 152 |
| Conread position: | 207-627 |
| Cow position: | chr19:19011195-19010777 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 278 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 146, 7 |
| Conread position: | 236-539 |
| Cow position: | chr19:36263731-36264032 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 6, 109 |
Show alignments to all cow chromosomes.