Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8029I24.3 |
| Conread position: | 124-547 |
| Cow position: | chr22:6332883-6332464 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 271 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 8, 262 |
| Conread position: | 125-415 |
| Cow position: | chr22:42992343-42992054 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 63, 143 |
| Conread position: | 126-418 |
| Cow position: | chr22:21590502-21590212 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 61, 20 |
| Conread position: | 126-453 |
| Cow position: | chr22:17327289-17327614 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 265, 146 |
| Conread position: | 136-415 |
| Cow position: | chr22:9045288-9045009 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 213, 55 |
| Conread position: | 137-419 |
| Cow position: | chr22:522238-522520 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 216, 203 |
| Conread position: | 138-436 |
| Cow position: | chr22:44935125-44934826 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 253, 276 |
| Conread position: | 138-465 |
| Cow position: | chr22:290547-290874 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 129, 116 |
| Conread position: | 138-534 |
| Cow position: | chr22:10908683-10909079 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 259 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 132, 33 |
| Conread position: | 138-534 |
| Cow position: | chr22:11803898-11804299 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 128, 301 |
| Conread position: | 138-534 |
| Cow position: | chr22:37292509-37292912 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 253 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 132, 307 |
| Conread position: | 139-534 |
| Cow position: | chr22:39468364-39468763 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 256 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 131, 276 |
| Conread position: | 140-436 |
| Cow position: | chr22:1519867-1520167 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 120, 277 |
| Conread position: | 140-541 |
| Cow position: | chr22:3763193-3763574 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 277 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 346, 43 |
| Conread position: | 144-521 |
| Cow position: | chr22:1281578-1281960 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 126, 8 |
| Conread position: | 148-532 |
| Cow position: | chr22:6021810-6021422 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 244 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 50, 194 |
| Conread position: | 148-541 |
| Cow position: | chr22:13614713-13615091 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 260 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 110, 130 |
| Conread position: | 149-427 |
| Cow position: | chr22:3803331-3803053 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 65, 72 |
| Conread position: | 149-534 |
| Cow position: | chr22:27308632-27309018 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 242, 123 |
| Conread position: | 149-544 |
| Cow position: | chr22:34162101-34162487 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 265 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 118, 197 |
| Conread position: | 152-418 |
| Cow position: | chr22:559566-559836 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 152-530 |
| Cow position: | chr22:12730546-12730925 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 245 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 61, 69 |
| Conread position: | 152-534 |
| Cow position: | chr22:15312809-15313194 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 111, 13 |
| Conread position: | 152-534 |
| Cow position: | chr22:34169480-34169096 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 239, 262 |
| Conread position: | 152-534 |
| Cow position: | chr22:44458198-44457812 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 132, 66 |
| Conread position: | 152-541 |
| Cow position: | chr22:23942998-23943390 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 160 |
| Conread position: | 152-541 |
| Cow position: | chr22:38176237-38175854 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 268 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 181, 125 |
| Conread position: | 157-517 |
| Cow position: | chr22:10560141-10559794 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 234, 79 |
| Conread position: | 158-393 |
| Cow position: | chr22:202854-202621 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 182, 0 |
| Conread position: | 159-538 |
| Cow position: | chr22:6876156-6876528 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 250 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 232, 127 |
| Conread position: | 171-489 |
| Cow position: | chr22:14659536-14659842 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 220, 22 |
| Conread position: | 171-562 |
| Cow position: | chr22:34958605-34958213 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 57, 68 |
| Conread position: | 178-541 |
| Cow position: | chr22:35913048-35913406 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 213, 181 |
| Conread position: | 179-534 |
| Cow position: | chr22:24951223-24950855 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 235 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 79, 246 |
| Conread position: | 181-534 |
| Cow position: | chr22:37992930-37993287 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 230 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 115, 170 |
| Conread position: | 194-417 |
| Cow position: | chr22:14004069-14003850 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 198, 130 |
| Conread position: | 213-434 |
| Cow position: | chr22:27997506-27997722 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 174, 59 |
| Conread position: | 280-585 |
| Cow position: | chr22:39919904-39919605 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 260, 129 |
Show alignments to all cow chromosomes.