Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8029I24.3 |
| Conread position: | 83-266 |
| Cow position: | chr23:39845577-39845391 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 51, 69 |
| Conread position: | 130-413 |
| Cow position: | chr23:7369685-7369407 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 261, 55 |
| Conread position: | 136-396 |
| Cow position: | chr23:30563577-30563319 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 65, 83 |
| Conread position: | 136-539 |
| Cow position: | chr23:9264772-9265163 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 21 |
| Conread position: | 137-439 |
| Cow position: | chr23:29402565-29402866 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 254, 50 |
| Conread position: | 138-415 |
| Cow position: | chr23:11779939-11779661 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 253, 0 |
| Conread position: | 138-415 |
| Cow position: | chr23:19490697-19490413 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 35, 45 |
| Conread position: | 138-418 |
| Cow position: | chr23:965339-965621 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 138-418 |
| Cow position: | chr23:3879931-3880207 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 253, 134 |
| Conread position: | 138-418 |
| Cow position: | chr23:15178228-15177947 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 128, 19 |
| Conread position: | 138-427 |
| Cow position: | chr23:4889840-4889550 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 142, 120 |
| Conread position: | 138-534 |
| Cow position: | chr23:2759044-2758645 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 253 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 132, 277 |
| Conread position: | 138-534 |
| Cow position: | chr23:15526721-15526326 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 39, 77 |
| Conread position: | 138-534 |
| Cow position: | chr23:23171655-23171258 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 253, 276 |
| Conread position: | 139-529 |
| Cow position: | chr23:5902819-5903193 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 269 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 81, 123 |
| Conread position: | 141-493 |
| Cow position: | chr23:3181128-3180789 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 252, 9 |
| Conread position: | 142-429 |
| Cow position: | chr23:33627229-33626949 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 249, 92 |
| Conread position: | 146-541 |
| Cow position: | chr23:8299224-8299618 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 265 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 43, 12 |
| Conread position: | 149-415 |
| Cow position: | chr23:2025937-2026204 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 242, 0 |
| Conread position: | 149-436 |
| Cow position: | chr23:14963903-14964190 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 242, 56 |
| Conread position: | 149-467 |
| Cow position: | chr23:2342226-2341903 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 17, 136 |
| Conread position: | 160-436 |
| Cow position: | chr23:4639491-4639768 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 184 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 119, 146 |
| Conread position: | 181-323 |
| Cow position: | chr23:33809099-33808958 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 188-519 |
| Cow position: | chr23:29451245-29451568 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 10, 34 |
Show alignments to all cow chromosomes.