Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8029I24.3 |
| Conread position: | 99-415 |
| Cow position: | chr24:22319236-22318916 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 34, 52 |
| Conread position: | 119-270 |
| Cow position: | chr24:36480696-36480847 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 125-534 |
| Cow position: | chr24:12334504-12334915 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 255 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 266, 289 |
| Conread position: | 128-539 |
| Cow position: | chr24:147360-147771 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 256 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 67, 131 |
| Conread position: | 130-324 |
| Cow position: | chr24:29408456-29408647 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 136-303 |
| Cow position: | chr24:16235051-16234890 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 136-317 |
| Cow position: | chr24:15038540-15038364 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 53, 79 |
| Conread position: | 136-444 |
| Cow position: | chr24:9545304-9544996 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 134, 16 |
| Conread position: | 137-543 |
| Cow position: | chr24:17695739-17696148 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 259 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 50, 278 |
| Conread position: | 138-415 |
| Cow position: | chr24:6060138-6059859 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 231, 0 |
| Conread position: | 138-436 |
| Cow position: | chr24:29188532-29188230 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 203 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 253, 0 |
| Conread position: | 138-516 |
| Cow position: | chr24:22972332-22971952 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 235 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 195, 199 |
| Conread position: | 138-534 |
| Cow position: | chr24:5991986-5992384 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 252 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 253, 288 |
| Conread position: | 138-534 |
| Cow position: | chr24:29305074-29305477 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 251 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 128, 115 |
| Conread position: | 138-544 |
| Cow position: | chr24:19834636-19834225 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 260 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 252, 279 |
| Conread position: | 139-518 |
| Cow position: | chr24:11938686-11939064 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 252, 166 |
| Conread position: | 139-520 |
| Cow position: | chr24:6194092-6193724 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 248 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 44, 77 |
| Conread position: | 139-534 |
| Cow position: | chr24:32846944-32846543 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 117, 9 |
| Conread position: | 139-541 |
| Cow position: | chr24:27127840-27128248 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 74, 187 |
| Conread position: | 140-537 |
| Cow position: | chr24:14349421-14349045 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 251, 44 |
| Conread position: | 141-318 |
| Cow position: | chr24:27211617-27211446 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 141-417 |
| Cow position: | chr24:19896241-19895978 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 57, 114 |
| Conread position: | 149-534 |
| Cow position: | chr24:6327801-6328188 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 247 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 247, 274 |
| Conread position: | 149-534 |
| Cow position: | chr24:6407266-6406873 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 250 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 124, 234 |
| Conread position: | 149-534 |
| Cow position: | chr24:23504634-23505021 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 243 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 242, 265 |
| Conread position: | 152-534 |
| Cow position: | chr24:6023880-6024260 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 239, 281 |
| Conread position: | 152-534 |
| Cow position: | chr24:6085288-6084912 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 236 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 239, 224 |
| Conread position: | 152-534 |
| Cow position: | chr24:13233483-13233095 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 238 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 117, 274 |
| Conread position: | 154-416 |
| Cow position: | chr24:12576768-12576497 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 102, 74 |
| Conread position: | 171-418 |
| Cow position: | chr24:4414325-4414571 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 99, 9 |
| Conread position: | 171-483 |
| Cow position: | chr24:39448440-39448744 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 83, 49 |
| Conread position: | 177-486 |
| Cow position: | chr24:31806544-31806247 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 129, 56 |
| Conread position: | 178-541 |
| Cow position: | chr24:19324252-19324609 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 36, 76 |
| Conread position: | 187-415 |
| Cow position: | chr24:37199819-37200048 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 55, 154 |
| Conread position: | 194-418 |
| Cow position: | chr24:13044446-13044671 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 197, 0 |
| Conread position: | 194-534 |
| Cow position: | chr24:9187547-9187890 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 197, 243 |
| Conread position: | 194-544 |
| Cow position: | chr24:15248175-15248528 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 8, 23 |
Show alignments to all cow chromosomes.