Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8029I24.3 |
| Conread position: | 99-317 |
| Cow position: | chr25:33049599-33049825 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 42, 112 |
| Conread position: | 130-418 |
| Cow position: | chr25:13782244-13781955 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 130, 143 |
| Conread position: | 136-433 |
| Cow position: | chr25:36636478-36636778 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 169, 44 |
| Conread position: | 137-324 |
| Cow position: | chr25:32988054-32988239 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 175, 0 |
| Conread position: | 138-317 |
| Cow position: | chr25:34506487-34506666 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 138-488 |
| Cow position: | chr25:17588355-17588703 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 223 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 131, 82 |
| Conread position: | 138-544 |
| Cow position: | chr25:25507904-25507498 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 51, 32 |
| Conread position: | 138-545 |
| Cow position: | chr25:20630830-20630423 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 254 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 132, 76 |
| Conread position: | 138-547 |
| Cow position: | chr25:18888540-18888952 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 51, 277 |
| Conread position: | 139-381 |
| Cow position: | chr25:3974235-3973993 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 78, 42 |
| Conread position: | 139-412 |
| Cow position: | chr25:32902117-32901843 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 115, 80 |
| Conread position: | 139-415 |
| Cow position: | chr25:12941472-12941748 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 252, 130 |
| Conread position: | 139-425 |
| Cow position: | chr25:18450520-18450240 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 252, 97 |
| Conread position: | 139-489 |
| Cow position: | chr25:30158139-30158489 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 227 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 243, 177 |
| Conread position: | 139-543 |
| Cow position: | chr25:18273570-18273973 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 263 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 131, 13 |
| Conread position: | 141-596 |
| Cow position: | chr25:3925026-3924592 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 293 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 24, 39 |
| Conread position: | 149-434 |
| Cow position: | chr25:12757894-12758182 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 90, 86 |
| Conread position: | 149-538 |
| Cow position: | chr25:22148730-22148340 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 221, 49 |
| Conread position: | 152-534 |
| Cow position: | chr25:18192574-18192959 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 118, 263 |
| Conread position: | 152-534 |
| Cow position: | chr25:27021398-27021780 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 239, 105 |
| Conread position: | 152-541 |
| Cow position: | chr25:13003670-13004068 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 264 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 43, 26 |
| Conread position: | 152-717 |
| Cow position: | chr25:26988307-26987719 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 381 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 81, 21 |
| Conread position: | 204-480 |
| Cow position: | chr25:26292612-26292341 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 120, 129 |
Show alignments to all cow chromosomes.