Cow genome map
Conread name: | Ss1.1-Pig4-TMW8029I24.3 |
Conread position: | 73-268 |
Cow position: | chr5:29718573-29718384 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 145 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 41, 56 |
Conread position: | 77-475 |
Cow position: | chr5:65721670-65722060 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 247 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 75, 66 |
Conread position: | 90-415 |
Cow position: | chr5:2915486-2915153 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 207 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 107-412 |
Cow position: | chr5:22830680-22830980 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 198 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 123, 39 |
Conread position: | 126-415 |
Cow position: | chr5:49519557-49519267 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 187 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 265, 0 |
Conread position: | 128-454 |
Cow position: | chr5:51313198-51313525 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 215 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 115, 141 |
Conread position: | 130-345 |
Cow position: | chr5:48087218-48087006 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 148 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 147, 120 |
Conread position: | 130-403 |
Cow position: | chr5:74502612-74502339 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 194 |
Alignm E-value: | 6e-40 |
Alignm gaps (pig, cow): | 209, 22 |
Conread position: | 130-433 |
Cow position: | chr5:10855824-10856126 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 192 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 261, 49 |
Conread position: | 130-534 |
Cow position: | chr5:18121490-18121891 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 261 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 53, 40 |
Conread position: | 131-503 |
Cow position: | chr5:35947393-35947036 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 252 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 350, 105 |
Conread position: | 132-347 |
Cow position: | chr5:69622600-69622386 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 152 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 189, 0 |
Conread position: | 134-377 |
Cow position: | chr5:3685237-3685005 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 174 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 136-390 |
Cow position: | chr5:25636825-25636577 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 175 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 136-405 |
Cow position: | chr5:35830009-35829743 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 181 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 187, 83 |
Conread position: | 136-411 |
Cow position: | chr5:28333458-28333731 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 181 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 243, 79 |
Conread position: | 136-530 |
Cow position: | chr5:21777949-21778326 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 257 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 130, 207 |
Conread position: | 137-453 |
Cow position: | chr5:3786913-3786590 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 211 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 133, 285 |
Conread position: | 138-415 |
Cow position: | chr5:24099650-24099373 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 179 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 39, 111 |
Conread position: | 138-418 |
Cow position: | chr5:48807754-48808035 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 180 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 253, 0 |
Conread position: | 138-418 |
Cow position: | chr5:57481554-57481835 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 192 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 215, 202 |
Conread position: | 138-454 |
Cow position: | chr5:6153918-6154230 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 205 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 253, 98 |
Conread position: | 138-479 |
Cow position: | chr5:307342-307683 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 212 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 127, 277 |
Conread position: | 138-486 |
Cow position: | chr5:53624938-53625272 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 227 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 253, 171 |
Conread position: | 138-519 |
Cow position: | chr5:59283301-59282921 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 237 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 253, 202 |
Conread position: | 138-522 |
Cow position: | chr5:64781031-64781416 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 242 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 253, 276 |
Conread position: | 138-534 |
Cow position: | chr5:10775284-10775682 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 245 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 139, 113 |
Conread position: | 138-534 |
Cow position: | chr5:35301083-35300685 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 253 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 61, 276 |
Conread position: | 138-534 |
Cow position: | chr5:38074016-38073618 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 251 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 253, 276 |
Conread position: | 138-534 |
Cow position: | chr5:45181160-45181558 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 251 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 253, 276 |
Conread position: | 138-534 |
Cow position: | chr5:46808296-46807898 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 251 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 257, 276 |
Conread position: | 138-547 |
Cow position: | chr5:55628976-55628565 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 261 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 253, 276 |
Conread position: | 138-547 |
Cow position: | chr5:73488575-73488984 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 255 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 253, 56 |
Conread position: | 139-334 |
Cow position: | chr5:62771984-62772172 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 139 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 133, 0 |
Conread position: | 139-415 |
Cow position: | chr5:43709185-43708899 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 190 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 17, 65 |
Conread position: | 139-485 |
Cow position: | chr5:40789050-40788698 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 221 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 10, 115 |
Conread position: | 139-494 |
Cow position: | chr5:18400707-18401060 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 226 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 129, 119 |
Conread position: | 139-542 |
Cow position: | chr5:20429042-20428638 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 270 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 250, 54 |
Conread position: | 140-401 |
Cow position: | chr5:74958159-74957900 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 171 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 33, 29 |
Conread position: | 140-404 |
Cow position: | chr5:22115069-22115331 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 171 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 141-531 |
Cow position: | chr5:68837801-68837414 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 265 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 25, 96 |
Conread position: | 142-401 |
Cow position: | chr5:5305574-5305315 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 175 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 108, 147 |
Conread position: | 142-434 |
Cow position: | chr5:21116734-21116440 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 225, 274 |
Conread position: | 148-541 |
Cow position: | chr5:74922904-74922510 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 263 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 168, 87 |
Conread position: | 148-621 |
Cow position: | chr5:74027340-74027820 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 312 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 18, 162 |
Conread position: | 149-303 |
Cow position: | chr5:16544480-16544326 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 114 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 112, 99 |
Conread position: | 149-313 |
Cow position: | chr5:30051777-30051939 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 117 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 149-522 |
Cow position: | chr5:34697578-34697202 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 237 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 38, 21 |
Conread position: | 149-534 |
Cow position: | chr5:44460456-44460069 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 246 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 242, 265 |
Conread position: | 152-418 |
Cow position: | chr5:1341062-1341328 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 177 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 87, 83 |
Conread position: | 152-438 |
Cow position: | chr5:26779217-26778940 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 199 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 62, 33 |
Conread position: | 152-479 |
Cow position: | chr5:46664988-46664662 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 204 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 239, 262 |
Conread position: | 158-541 |
Cow position: | chr5:63404518-63404897 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 258 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 32, 66 |
Conread position: | 160-412 |
Cow position: | chr5:73974912-73975159 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 172 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 224, 131 |
Conread position: | 170-428 |
Cow position: | chr5:15681270-15681524 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 173 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 217, 18 |
Conread position: | 187-534 |
Cow position: | chr5:52878682-52878337 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 223 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 43, 227 |
Conread position: | 193-489 |
Cow position: | chr5:69385035-69384737 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 198 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 83, 12 |
Conread position: | 194-534 |
Cow position: | chr5:4757236-4757577 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 214 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 197, 97 |
Conread position: | 194-534 |
Cow position: | chr5:23959388-23959729 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 218 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 197, 146 |
Conread position: | 211-393 |
Cow position: | chr5:68538649-68538827 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 129 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 220-519 |
Cow position: | chr5:62361323-62361023 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 195 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 20, 32 |
Conread position: | 233-534 |
Cow position: | chr5:32308504-32308805 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 194 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 157, 181 |
Show alignments to all cow chromosomes.