Cow genome map

Conread name: Ss1.1-Pig4-TMW8029I24.3

Conread position: 73-268
Cow position: chr5:29718573-29718384 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 41, 56

Conread position: 77-475
Cow position: chr5:65721670-65722060 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 247
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 75, 66

Conread position: 90-415
Cow position: chr5:2915486-2915153 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 207
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 107-412
Cow position: chr5:22830680-22830980 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 198
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 123, 39

Conread position: 126-415
Cow position: chr5:49519557-49519267 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 187
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 265, 0

Conread position: 128-454
Cow position: chr5:51313198-51313525 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 215
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 115, 141

Conread position: 130-345
Cow position: chr5:48087218-48087006 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 148
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 147, 120

Conread position: 130-403
Cow position: chr5:74502612-74502339 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 194
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 209, 22

Conread position: 130-433
Cow position: chr5:10855824-10856126 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 192
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 261, 49

Conread position: 130-534
Cow position: chr5:18121490-18121891 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 261
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 53, 40

Conread position: 131-503
Cow position: chr5:35947393-35947036 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 252
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 350, 105

Conread position: 132-347
Cow position: chr5:69622600-69622386 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 189, 0

Conread position: 134-377
Cow position: chr5:3685237-3685005 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 174
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 11, 0

Conread position: 136-390
Cow position: chr5:25636825-25636577 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 175
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 33, 0

Conread position: 136-405
Cow position: chr5:35830009-35829743 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 181
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 187, 83

Conread position: 136-411
Cow position: chr5:28333458-28333731 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 181
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 243, 79

Conread position: 136-530
Cow position: chr5:21777949-21778326 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 257
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 130, 207

Conread position: 137-453
Cow position: chr5:3786913-3786590 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 211
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 133, 285

Conread position: 138-415
Cow position: chr5:24099650-24099373 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 179
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 39, 111

Conread position: 138-418
Cow position: chr5:48807754-48808035 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 180
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 253, 0

Conread position: 138-418
Cow position: chr5:57481554-57481835 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 192
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 215, 202

Conread position: 138-454
Cow position: chr5:6153918-6154230 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 205
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 253, 98

Conread position: 138-479
Cow position: chr5:307342-307683 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 212
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 127, 277

Conread position: 138-486
Cow position: chr5:53624938-53625272 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 227
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 253, 171

Conread position: 138-519
Cow position: chr5:59283301-59282921 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 237
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 253, 202

Conread position: 138-522
Cow position: chr5:64781031-64781416 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 242
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 253, 276

Conread position: 138-534
Cow position: chr5:10775284-10775682 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 245
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 139, 113

Conread position: 138-534
Cow position: chr5:35301083-35300685 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 253
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 61, 276

Conread position: 138-534
Cow position: chr5:38074016-38073618 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 251
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 253, 276

Conread position: 138-534
Cow position: chr5:45181160-45181558 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 251
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 253, 276

Conread position: 138-534
Cow position: chr5:46808296-46807898 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 251
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 257, 276

Conread position: 138-547
Cow position: chr5:55628976-55628565 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 261
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 253, 276

Conread position: 138-547
Cow position: chr5:73488575-73488984 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 255
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 253, 56

Conread position: 139-334
Cow position: chr5:62771984-62772172 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 133, 0

Conread position: 139-415
Cow position: chr5:43709185-43708899 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 190
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 17, 65

Conread position: 139-485
Cow position: chr5:40789050-40788698 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 221
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 10, 115

Conread position: 139-494
Cow position: chr5:18400707-18401060 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 226
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 129, 119

Conread position: 139-542
Cow position: chr5:20429042-20428638 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 270
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 250, 54

Conread position: 140-401
Cow position: chr5:74958159-74957900 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 171
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 33, 29

Conread position: 140-404
Cow position: chr5:22115069-22115331 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 171
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 67, 0

Conread position: 141-531
Cow position: chr5:68837801-68837414 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 265
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 25, 96

Conread position: 142-401
Cow position: chr5:5305574-5305315 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 175
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 108, 147

Conread position: 142-434
Cow position: chr5:21116734-21116440 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 274

Conread position: 148-541
Cow position: chr5:74922904-74922510 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 263
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 168, 87

Conread position: 148-621
Cow position: chr5:74027340-74027820 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 312
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 18, 162

Conread position: 149-303
Cow position: chr5:16544480-16544326 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 112, 99

Conread position: 149-313
Cow position: chr5:30051777-30051939 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 149-522
Cow position: chr5:34697578-34697202 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 237
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 38, 21

Conread position: 149-534
Cow position: chr5:44460456-44460069 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 246
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 242, 265

Conread position: 152-418
Cow position: chr5:1341062-1341328 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 177
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 87, 83

Conread position: 152-438
Cow position: chr5:26779217-26778940 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 199
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 62, 33

Conread position: 152-479
Cow position: chr5:46664988-46664662 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 204
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 239, 262

Conread position: 158-541
Cow position: chr5:63404518-63404897 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 258
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 32, 66

Conread position: 160-412
Cow position: chr5:73974912-73975159 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 172
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 224, 131

Conread position: 170-428
Cow position: chr5:15681270-15681524 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 173
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 217, 18

Conread position: 187-534
Cow position: chr5:52878682-52878337 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 223
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 43, 227

Conread position: 193-489
Cow position: chr5:69385035-69384737 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 198
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 83, 12

Conread position: 194-534
Cow position: chr5:4757236-4757577 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 214
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 197, 97

Conread position: 194-534
Cow position: chr5:23959388-23959729 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 218
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 197, 146

Conread position: 211-393
Cow position: chr5:68538649-68538827 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 129
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 220-519
Cow position: chr5:62361323-62361023 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 195
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 20, 32

Conread position: 233-534
Cow position: chr5:32308504-32308805 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 194
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 157, 181

Show alignments to all cow chromosomes.