Cow genome map

Conread name: Ss1.1-Pig4-TMW8029I24.3

Conread position: 49-417
Cow position: chr6:43377087-43376721 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 234
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 22, 118

Conread position: 101-515
Cow position: chr6:4258590-4259000 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 273
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 31, 55

Conread position: 120-489
Cow position: chr6:39019660-39020004 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 260
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 33, 16

Conread position: 126-415
Cow position: chr6:15140040-15140334 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 195
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 249, 0

Conread position: 129-418
Cow position: chr6:11871512-11871801 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 185
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 262, 223

Conread position: 129-534
Cow position: chr6:3150397-3149991 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 257
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 69, 155

Conread position: 130-405
Cow position: chr6:55542131-55542408 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 175
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 133, 0

Conread position: 130-522
Cow position: chr6:39333736-39334130 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 248
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 261, 284

Conread position: 136-438
Cow position: chr6:32448783-32449082 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 197
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 251, 93

Conread position: 136-489
Cow position: chr6:65833368-65833725 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 238
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 57, 117

Conread position: 136-510
Cow position: chr6:64281935-64282305 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 246
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 195, 185

Conread position: 136-531
Cow position: chr6:28170028-28169634 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 257
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 255, 61

Conread position: 136-538
Cow position: chr6:20648948-20649340 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 252
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 41, 13

Conread position: 137-534
Cow position: chr6:44032915-44032520 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 250
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 139, 20

Conread position: 138-409
Cow position: chr6:54415496-54415228 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 187
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 215, 180

Conread position: 138-415
Cow position: chr6:40553449-40553729 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 181
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 132, 0

Conread position: 138-418
Cow position: chr6:8760170-8760446 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 188
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 215, 76

Conread position: 138-418
Cow position: chr6:15278689-15278967 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 178
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 253, 86

Conread position: 138-418
Cow position: chr6:24240177-24239902 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 183
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 253, 41

Conread position: 138-418
Cow position: chr6:36527426-36527145 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 191
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 129, 273

Conread position: 138-418
Cow position: chr6:40866199-40866473 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 184
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 254, 202

Conread position: 138-421
Cow position: chr6:44905605-44905330 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 191
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 237, 19

Conread position: 138-428
Cow position: chr6:3276247-3276541 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 197
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 132, 0

Conread position: 138-433
Cow position: chr6:17047178-17046880 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 196
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 141, 0

Conread position: 138-436
Cow position: chr6:58027799-58027499 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 199
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 141, 120

Conread position: 138-479
Cow position: chr6:50646059-50646399 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 215
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 253, 276

Conread position: 138-519
Cow position: chr6:58601608-58601223 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 246
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 75, 83

Conread position: 138-522
Cow position: chr6:27528872-27529265 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 245
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 131, 60

Conread position: 138-530
Cow position: chr6:1404461-1404861 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 250
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 195, 282

Conread position: 138-533
Cow position: chr6:1410527-1410930 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 253
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 195, 282

Conread position: 138-534
Cow position: chr6:13105185-13104785 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 249
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 132, 229

Conread position: 138-534
Cow position: chr6:20559978-20560379 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 248
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 232, 131

Conread position: 138-534
Cow position: chr6:51087066-51086670 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 249
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 253, 76

Conread position: 138-534
Cow position: chr6:65820848-65821246 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 246
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 253, 284

Conread position: 138-544
Cow position: chr6:39438890-39438483 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 258
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 253, 276

Conread position: 139-534
Cow position: chr6:34891000-34891397 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 250
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 252, 275

Conread position: 140-419
Cow position: chr6:26497426-26497696 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 190
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 130, 65

Conread position: 140-540
Cow position: chr6:34784562-34784955 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 268
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 72, 161

Conread position: 142-418
Cow position: chr6:2953092-2953364 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 179
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 99, 45

Conread position: 145-488
Cow position: chr6:46573489-46573831 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 216
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 246, 269

Conread position: 145-489
Cow position: chr6:11444291-11444635 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 219
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 249, 97

Conread position: 149-415
Cow position: chr6:41190433-41190166 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 176
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 40, 99

Conread position: 149-453
Cow position: chr6:703331-703028 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 195
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 130, 188

Conread position: 149-524
Cow position: chr6:39910448-39910077 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 237
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 242, 265

Conread position: 149-544
Cow position: chr6:8203299-8202900 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 246
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 123, 267

Conread position: 151-534
Cow position: chr6:13848138-13847753 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 236
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 240, 107

Conread position: 152-418
Cow position: chr6:914744-914475 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 174
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 36, 192

Conread position: 152-532
Cow position: chr6:19492405-19492040 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 250
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 126, 40

Conread position: 152-534
Cow position: chr6:26669752-26670138 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 247
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 182, 106

Conread position: 152-534
Cow position: chr6:44149446-44149829 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 238
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 240, 106

Conread position: 154-418
Cow position: chr6:30273786-30274048 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 173
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 125, 159

Conread position: 171-409
Cow position: chr6:51492240-51492474 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 159
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 98, 0

Conread position: 187-542
Cow position: chr6:57408290-57408640 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 233
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 273, 201

Conread position: 190-541
Cow position: chr6:54180080-54179727 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 240
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 37, 89

Conread position: 194-533
Cow position: chr6:47042132-47042473 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 217
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 197, 220

Conread position: 194-534
Cow position: chr6:68027996-68027649 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 216
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 139, 225

Conread position: 539-729
Cow position: chr6:5507914-5508100 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 139, 46

Show alignments to all cow chromosomes.