Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8029I24.3
        

               Conread position:
               70-392
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               67, 24
               

               Conread position:
               71-425
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               234
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               52, 91
               

               Conread position:
               72-302
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               73, 22
               

               Conread position:
               72-418
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               65, 86
               

               Conread position:
               72-477
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               271
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               62, 80
               

               Conread position:
               72-539
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               310
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               120, 72
               

               Conread position:
               74-541
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               305
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               94, 70
               

               Conread position:
               75-242
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               42, 27
               

               Conread position:
               90-418
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               217
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               90-534
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               289
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               42, 57
               

               Conread position:
               101-440
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               34, 71
               

               Conread position:
               115-541
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 13
               

               Conread position:
               124-415
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               9, 49
               

               Conread position:
               130-456
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               22, 29
               

               Conread position:
               130-534
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               253
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               261, 284
               

               Conread position:
               136-300
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               136-416
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               255, 84
               

               Conread position:
               136-418
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               255, 15
               

               Conread position:
               136-436
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               43, 232
               

               Conread position:
               136-534
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               257
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               23, 279
               

               Conread position:
               136-534
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               262, 72
               

               Conread position:
               136-539
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               197, 43
               

               Conread position:
               136-541
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               270
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               53, 194
               

               Conread position:
               136-541
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               266
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               90, 96
               

               Conread position:
               136-595
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               305
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               53, 73
               

               Conread position:
               137-307
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               138-415
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               180
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               138-415
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               253, 0
               

               Conread position:
               138-415
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               138-416
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               253, 97
               

               Conread position:
               138-417
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               253, 131
               

               Conread position:
               138-418
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               100, 47
               

               Conread position:
               138-418
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               131, 32
               

               Conread position:
               138-436
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               198
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               253, 49
               

               Conread position:
               138-519
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               245
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               95, 90
               

               Conread position:
               138-522
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               240
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               253, 49
               

               Conread position:
               138-532
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               256
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               139, 56
               

               Conread position:
               138-533
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               253
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               246, 60
               

               Conread position:
               138-534
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               254
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               253, 276
               

               Conread position:
               138-534
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               247
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               254, 120
               

               Conread position:
               138-534
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               252
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               253, 159
               

               Conread position:
               138-534
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               249
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               253, 115
               

               Conread position:
               138-534
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               259
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               215, 277
               

               Conread position:
               138-534
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               247
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               253, 202
               

               Conread position:
               138-534
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               245
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               253, 276
               

               Conread position:
               138-534
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               254
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               128, 278
               

               Conread position:
               138-534
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               250
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               253, 276
               

               Conread position:
               138-534
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               255
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               231, 277
               

               Conread position:
               138-534
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               250
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               138, 115
               

               Conread position:
               138-534
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               248
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               132, 111
               

               Conread position:
               138-534
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               247
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               249, 287
               

               Conread position:
               138-537
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               251
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               131, 119
               

               Conread position:
               139-327
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               46, 106
               

               Conread position:
               139-331
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               139-380
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               95, 53
               

               Conread position:
               139-428
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               252, 42
               

               Conread position:
               139-479
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               221
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               28, 40
               

               Conread position:
               139-483
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               217
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               31, 13
               

               Conread position:
               139-537
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               262
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               252, 275
               

               Conread position:
               139-541
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               265
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               51, 191
               

               Conread position:
               139-542
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               272
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               346, 192
               

               Conread position:
               139-556
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               266
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               252, 91
               

               Conread position:
               140-489
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               170, 38
               

               Conread position:
               147-488
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               33, 188
               

               Conread position:
               148-540
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               270
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               99, 51
               

               Conread position:
               149-409
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               243, 56
               

               Conread position:
               149-418
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               29, 19
               

               Conread position:
               149-418
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               149-527
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               236
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               242, 264
               

               Conread position:
               149-532
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               239
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               121, 269
               

               Conread position:
               149-534
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               244
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               204, 29
               

               Conread position:
               149-534
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               248
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               127, 198
               

               Conread position:
               149-534
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               190, 272
               

               Conread position:
               149-534
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               247
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               116, 127
               

               Conread position:
               149-537
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               242, 87
               

               Conread position:
               152-418
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               152-428
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               239, 72
               

               Conread position:
               152-471
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               239, 109
               

               Conread position:
               152-534
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               246
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               35, 109
               

               Conread position:
               152-534
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 7
               

               Conread position:
               152-539
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               247
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               62, 69
               

               Conread position:
               152-728
               

               Cow position:
               
               

               Alignm length:
               586
               

               Alignm identity:
               349
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               239, 262
               

               Conread position:
               153-519
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               166, 34
               

               Conread position:
               154-440
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               229, 36
               

               Conread position:
               154-442
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               179, 98
               

               Conread position:
               160-484
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               212
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               232, 102
               

               Conread position:
               161-516
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               236
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               46, 33
               

               Conread position:
               170-539
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               213, 52
               

               Conread position:
               175-543
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               239
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               96, 5
               

               Conread position:
               181-534
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               210, 233
               

               Conread position:
               181-534
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               106, 235
               

               Conread position:
               194-488
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               156, 233
               

               Conread position:
               194-532
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               197, 229
               

               Conread position:
               194-534
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               214
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               197, 232
               

               Conread position:
               194-534
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               64, 222
               

               Conread position:
               199-539
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               214
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               154, 20
               

               Conread position:
               200-479
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               123, 36
               

               Conread position:
               221-594
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               242
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               19, 15
               

               Conread position:
               233-726
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               333
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               29, 52
               
Show alignments to all cow chromosomes.