Cow genome map

Conread name: Ss1.1-Pig4-TMW8029M14.5

Conread position: 1-248
Cow position: chr10:32557672-32557923 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 172
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 46, 30

Conread position: 1-248
Cow position: chr10:57989672-57989424 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 182
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 18, 51

Conread position: 2-232
Cow position: chr10:14861581-14861810 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 156
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 143, 201

Conread position: 2-248
Cow position: chr10:11821086-11821335 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 15

Conread position: 2-248
Cow position: chr10:21900456-21900216 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 169
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 168, 24

Conread position: 3-245
Cow position: chr10:22101564-22101799 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 170
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 143, 23

Conread position: 4-248
Cow position: chr10:39040976-39040735 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 175
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 141, 47

Conread position: 5-130
Cow position: chr10:42110661-42110785 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 96
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 5-178
Cow position: chr10:42749096-42749270 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 125
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 140, 35

Conread position: 5-238
Cow position: chr10:38848039-38848270 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 160
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 140, 22

Conread position: 5-248
Cow position: chr10:21487241-21487485 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 182
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 14, 47

Conread position: 5-248
Cow position: chr10:29846326-29846080 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 181
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 14, 47

Conread position: 5-248
Cow position: chr10:32064910-32065159 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 176
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 137, 163

Conread position: 5-248
Cow position: chr10:38345036-38344791 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 180
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 14, 48

Conread position: 5-248
Cow position: chr10:62408525-62408281 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 178
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 14, 47

Conread position: 6-245
Cow position: chr10:17432931-17432692 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 175
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 56, 31

Conread position: 6-248
Cow position: chr10:24977440-24977197 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 167

Conread position: 6-248
Cow position: chr10:38538178-38537934 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 180
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 13, 24

Conread position: 6-248
Cow position: chr10:38545573-38545346 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 165, 38

Conread position: 6-248
Cow position: chr10:41388785-41388543 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 167
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 16

Conread position: 7-239
Cow position: chr10:26596938-26597171 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 74, 202

Conread position: 7-245
Cow position: chr10:10582133-10582367 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 163
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 7-248
Cow position: chr10:28931062-28930822 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 171
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 138, 24

Conread position: 8-166
Cow position: chr10:6260084-6259928 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 137, 96

Conread position: 8-244
Cow position: chr10:41774903-41774672 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 160
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 137, 43

Conread position: 8-246
Cow position: chr10:21077225-21077459 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 185
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 21, 106

Conread position: 8-248
Cow position: chr10:64302432-64302199 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 187
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 143, 10

Conread position: 9-245
Cow position: chr10:3542894-3542661 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 168
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 136, 28

Conread position: 9-245
Cow position: chr10:8326966-8326730 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 176
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 128, 38

Conread position: 9-248
Cow position: chr10:25564933-25564698 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 173
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 17, 0

Conread position: 10-248
Cow position: chr10:7281767-7281525 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 174
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 14, 41

Conread position: 11-248
Cow position: chr10:5849299-5849063 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 171
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 135, 17

Conread position: 11-248
Cow position: chr10:11698571-11698806 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 173
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 134, 17

Conread position: 11-248
Cow position: chr10:14804163-14804396 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 176
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 134, 15

Conread position: 11-248
Cow position: chr10:39180110-39180348 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 88, 15

Conread position: 11-248
Cow position: chr10:41157774-41158010 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 169
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 134, 15

Conread position: 11-248
Cow position: chr10:41567429-41567665 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 178
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 135, 15

Conread position: 11-248
Cow position: chr10:56065000-56065236 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 174
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 134, 17

Conread position: 11-249
Cow position: chr10:19495959-19495722 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 171
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 134, 15

Conread position: 11-249
Cow position: chr10:21740425-21740189 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 170
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 134, 17

Conread position: 11-249
Cow position: chr10:32578615-32578851 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 174
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 135, 17

Conread position: 11-249
Cow position: chr10:55093592-55093830 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 180
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 134, 15

Conread position: 11-250
Cow position: chr10:21400344-21400106 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 180
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 135, 15

Conread position: 14-245
Cow position: chr10:19511942-19512173 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 171
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 132, 13

Conread position: 14-245
Cow position: chr10:30685177-30684948 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 165
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 132, 15

Conread position: 15-248
Cow position: chr10:51952295-51952059 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 173
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 12, 0

Conread position: 18-153
Cow position: chr10:25359739-25359874 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 127, 33

Conread position: 18-248
Cow position: chr10:8290318-8290546 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 170
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 128, 33

Conread position: 20-248
Cow position: chr10:28641875-28642102 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 125, 8

Conread position: 32-248
Cow position: chr10:2120659-2120444 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 163
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 114, 19

Conread position: 49-248
Cow position: chr10:64287991-64287791 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 157
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 7, 34

Conread position: 59-248
Cow position: chr10:16925910-16926100 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 86, 0

Conread position: 59-248
Cow position: chr10:44294538-44294350 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 85, 0

Conread position: 60-248
Cow position: chr10:19715187-19715002 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 86, 21

Conread position: 74-248
Cow position: chr10:37770760-37770935 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 72, 136

Conread position: 75-249
Cow position: chr10:4191849-4191674 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 71, 0

Conread position: 75-249
Cow position: chr10:39816097-39815923 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 89, 96

Conread position: 75-249
Cow position: chr10:47907319-47907494 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 71, 0

Conread position: 82-244
Cow position: chr10:39779636-39779798 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 63, 74

Conread position: 83-248
Cow position: chr10:14335444-14335278 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 63, 0

Conread position: 86-248
Cow position: chr10:1377647-1377810 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 60, 0

Conread position: 126-248
Cow position: chr10:29102137-29102014 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 422-546
Cow position: chr10:61148683-61148812 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 548-712
Cow position: chr10:57142199-57142041 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 548-713
Cow position: chr10:41596381-41596550 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 548-730
Cow position: chr10:29252181-29252367 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 75, 10

Conread position: 548-730
Cow position: chr10:39228164-39228345 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 173, 71

Conread position: 552-728
Cow position: chr10:13315959-13316139 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 75, 122

Conread position: 552-728
Cow position: chr10:50042623-50042797 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 553-732
Cow position: chr10:37442564-37442746 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 127
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 73, 0

Show alignments to all cow chromosomes.