Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8029M14.5
        

               Conread position:
               1-248
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               46, 30
               

               Conread position:
               1-248
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               182
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               18, 51
               

               Conread position:
               2-232
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               143, 201
               

               Conread position:
               2-248
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 15
               

               Conread position:
               2-248
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               169
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               168, 24
               

               Conread position:
               3-245
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               143, 23
               

               Conread position:
               4-248
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               141, 47
               

               Conread position:
               5-130
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               96
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               5-178
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               140, 35
               

               Conread position:
               5-238
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               140, 22
               

               Conread position:
               5-248
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               182
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               14, 47
               

               Conread position:
               5-248
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               181
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               14, 47
               

               Conread position:
               5-248
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               137, 163
               

               Conread position:
               5-248
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               180
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               14, 48
               

               Conread position:
               5-248
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               178
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               14, 47
               

               Conread position:
               6-245
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               56, 31
               

               Conread position:
               6-248
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 167
               

               Conread position:
               6-248
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               13, 24
               

               Conread position:
               6-248
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               165, 38
               

               Conread position:
               6-248
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               35, 16
               

               Conread position:
               7-239
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               74, 202
               

               Conread position:
               7-245
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               7-248
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               138, 24
               

               Conread position:
               8-166
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               137, 96
               

               Conread position:
               8-244
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               137, 43
               

               Conread position:
               8-246
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               185
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               21, 106
               

               Conread position:
               8-248
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               187
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               143, 10
               

               Conread position:
               9-245
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               136, 28
               

               Conread position:
               9-245
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               128, 38
               

               Conread position:
               9-248
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               173
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               10-248
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               14, 41
               

               Conread position:
               11-248
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               135, 17
               

               Conread position:
               11-248
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               134, 17
               

               Conread position:
               11-248
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               134, 15
               

               Conread position:
               11-248
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               88, 15
               

               Conread position:
               11-248
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               134, 15
               

               Conread position:
               11-248
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               178
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               135, 15
               

               Conread position:
               11-248
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               134, 17
               

               Conread position:
               11-249
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               134, 15
               

               Conread position:
               11-249
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               134, 17
               

               Conread position:
               11-249
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               135, 17
               

               Conread position:
               11-249
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               180
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               134, 15
               

               Conread position:
               11-250
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               180
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               135, 15
               

               Conread position:
               14-245
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               132, 13
               

               Conread position:
               14-245
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               132, 15
               

               Conread position:
               15-248
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               18-153
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               127, 33
               

               Conread position:
               18-248
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               128, 33
               

               Conread position:
               20-248
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               125, 8
               

               Conread position:
               32-248
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               114, 19
               

               Conread position:
               49-248
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               7, 34
               

               Conread position:
               59-248
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               59-248
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               60-248
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               86, 21
               

               Conread position:
               74-248
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               72, 136
               

               Conread position:
               75-249
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               75-249
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               89, 96
               

               Conread position:
               75-249
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               82-244
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               63, 74
               

               Conread position:
               83-248
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               86-248
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               126-248
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               95
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               422-546
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               103
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               548-712
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               548-713
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               548-730
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               75, 10
               

               Conread position:
               548-730
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               173, 71
               

               Conread position:
               552-728
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               75, 122
               

               Conread position:
               552-728
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               553-732
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               73, 0
               
Show alignments to all cow chromosomes.