Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8029M14.5 |
| Conread position: | 3-248 |
| Cow position: | chr12:25100811-25100567 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 142, 48 |
| Conread position: | 5-248 |
| Cow position: | chr12:6406400-6406156 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 179 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 14, 47 |
| Conread position: | 5-248 |
| Cow position: | chr12:11098493-11098735 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 14, 47 |
| Conread position: | 5-248 |
| Cow position: | chr12:42859576-42859333 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 14, 22 |
| Conread position: | 7-248 |
| Cow position: | chr12:3631615-3631374 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 18, 35 |
| Conread position: | 10-244 |
| Cow position: | chr12:2282807-2283046 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 9, 23 |
| Conread position: | 10-248 |
| Cow position: | chr12:28765767-28765528 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 11-248 |
| Cow position: | chr12:4157629-4157865 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 134, 17 |
| Conread position: | 11-248 |
| Cow position: | chr12:21254408-21254176 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 37, 67 |
| Conread position: | 11-248 |
| Cow position: | chr12:32653796-32654031 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 134, 15 |
| Conread position: | 11-248 |
| Cow position: | chr12:33986414-33986650 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 134, 17 |
| Conread position: | 11-248 |
| Cow position: | chr12:37558808-37559038 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 11-249 |
| Cow position: | chr12:43031133-43030898 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 13-249 |
| Cow position: | chr12:21426948-21427181 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 177 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 132, 15 |
| Conread position: | 14-248 |
| Cow position: | chr12:1402751-1402985 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 131, 37 |
| Conread position: | 18-248 |
| Cow position: | chr12:22205483-22205253 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 172 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 127, 33 |
| Conread position: | 20-248 |
| Cow position: | chr12:14662369-14662137 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 13, 155 |
| Conread position: | 37-245 |
| Cow position: | chr12:27855676-27855474 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 108, 15 |
| Conread position: | 47-248 |
| Cow position: | chr12:8197502-8197704 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 98, 124 |
| Conread position: | 47-248 |
| Cow position: | chr12:16821761-16821963 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 99, 125 |
| Conread position: | 59-244 |
| Cow position: | chr12:21500765-21500944 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 78, 110 |
| Conread position: | 70-242 |
| Cow position: | chr12:17979067-17979235 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 76, 18 |
| Conread position: | 541-732 |
| Cow position: | chr12:44622343-44622530 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 174, 77 |
| Conread position: | 547-730 |
| Cow position: | chr12:23764485-23764668 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 173, 72 |
| Conread position: | 548-711 |
| Cow position: | chr12:46120830-46120668 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 548-719 |
| Cow position: | chr12:24186489-24186321 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 548-724 |
| Cow position: | chr12:4014431-4014261 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 548-730 |
| Cow position: | chr12:33319666-33319472 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 548-730 |
| Cow position: | chr12:34148359-34148172 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 552-727 |
| Cow position: | chr12:25456415-25456587 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 163, 67 |
Show alignments to all cow chromosomes.