Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8029M14.5
        

               Conread position:
               1-245
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               144, 25
               

               Conread position:
               2-248
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               14, 57
               

               Conread position:
               5-248
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               14, 47
               

               Conread position:
               5-248
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               180
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               14, 47
               

               Conread position:
               5-248
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               14, 33
               

               Conread position:
               5-248
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               181
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               14, 23
               

               Conread position:
               5-248
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               141, 24
               

               Conread position:
               5-249
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               177
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               14, 47
               

               Conread position:
               5-249
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               6-246
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 32
               

               Conread position:
               6-248
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               66, 38
               

               Conread position:
               6-248
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               139, 13
               

               Conread position:
               6-248
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               7-243
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               26, 153
               

               Conread position:
               7-245
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               138, 20
               

               Conread position:
               7-246
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 15
               

               Conread position:
               7-248
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               138, 20
               

               Conread position:
               8-248
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               9, 19
               

               Conread position:
               11-245
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               135, 16
               

               Conread position:
               11-248
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               178
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               135, 17
               

               Conread position:
               11-248
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               176
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               134, 17
               

               Conread position:
               11-248
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               135, 15
               

               Conread position:
               11-248
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               135, 15
               

               Conread position:
               11-248
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               131, 15
               

               Conread position:
               11-249
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               134, 17
               

               Conread position:
               11-249
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               135, 20
               

               Conread position:
               11-249
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               178
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               31, 17
               

               Conread position:
               13-246
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               12, 98
               

               Conread position:
               13-255
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               50, 17
               

               Conread position:
               14-244
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               50, 33
               

               Conread position:
               14-245
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               14, 42
               

               Conread position:
               14-248
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               131, 37
               

               Conread position:
               14-256
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 64
               

               Conread position:
               18-248
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               127, 33
               

               Conread position:
               18-248
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               63, 33
               

               Conread position:
               18-248
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               127, 9
               

               Conread position:
               18-248
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               20-248
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               13, 146
               

               Conread position:
               23-184
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               37-246
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               133, 96
               

               Conread position:
               37-248
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               108, 10
               

               Conread position:
               39-248
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               103, 95
               

               Conread position:
               47-249
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               59-161
               

               Cow position:
               
               

               Alignm length:
               104
               

               Alignm identity:
               88
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               61-244
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               61-248
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               167, 0
               

               Conread position:
               72-248
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               19, 72
               

               Conread position:
               75-248
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               70, 54
               

               Conread position:
               75-248
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               71, 97
               

               Conread position:
               76-248
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               80-249
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               66, 21
               

               Conread position:
               83-248
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               85-248
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               60, 11
               

               Conread position:
               86-246
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               86-248
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               57, 27
               

               Conread position:
               89-249
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               416-555
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               67, 43
               

               Conread position:
               545-730
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               34, 45
               

               Conread position:
               548-713
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               548-723
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               548-724
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               548-728
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               548-728
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               41, 47
               

               Conread position:
               548-730
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               42, 37
               

               Conread position:
               548-730
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               552-727
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               103, 59
               

               Conread position:
               560-729
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               64, 139
               

               Conread position:
               625-732
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               86
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.