Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8029M14.5
        

               Conread position:
               1-245
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               184
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               18, 51
               

               Conread position:
               1-248
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               193
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               116, 46
               

               Conread position:
               2-248
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               18, 186
               

               Conread position:
               5-244
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               36, 24
               

               Conread position:
               5-245
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               28, 136
               

               Conread position:
               5-245
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               14, 48
               

               Conread position:
               5-245
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               178
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               14, 47
               

               Conread position:
               5-248
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               14, 23
               

               Conread position:
               5-248
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               14, 23
               

               Conread position:
               5-248
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               179
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               14, 23
               

               Conread position:
               5-248
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               14, 40
               

               Conread position:
               5-248
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               181
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               14, 22
               

               Conread position:
               5-248
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               138, 22
               

               Conread position:
               5-248
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               14, 48
               

               Conread position:
               5-248
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               14, 47
               

               Conread position:
               5-248
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               184
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               14, 36
               

               Conread position:
               5-248
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               141, 46
               

               Conread position:
               5-248
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               113, 21
               

               Conread position:
               5-248
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               132, 159
               

               Conread position:
               5-248
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               183
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               14, 47
               

               Conread position:
               5-248
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               181
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               14, 47
               

               Conread position:
               5-248
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               14, 23
               

               Conread position:
               5-248
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               5-248
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               14, 47
               

               Conread position:
               7-232
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               109, 44
               

               Conread position:
               7-248
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               47, 20
               

               Conread position:
               8-171
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               137, 44
               

               Conread position:
               8-248
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               137, 43
               

               Conread position:
               11-222
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               134, 15
               

               Conread position:
               11-248
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               134, 15
               

               Conread position:
               11-248
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               176
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               134, 17
               

               Conread position:
               11-248
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               135, 17
               

               Conread position:
               11-249
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               135, 19
               

               Conread position:
               12-248
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               134, 16
               

               Conread position:
               13-248
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               132, 99
               

               Conread position:
               14-248
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               129, 193
               

               Conread position:
               18-245
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               15, 34
               

               Conread position:
               18-248
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               42, 9
               

               Conread position:
               19-248
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               126, 33
               

               Conread position:
               22-232
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               121, 18
               

               Conread position:
               60-248
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               157
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 27
               

               Conread position:
               60-248
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               60-248
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               60-255
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               85, 109
               

               Conread position:
               66-248
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               79, 65
               

               Conread position:
               68-245
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               68-248
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               73-248
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               73, 55
               

               Conread position:
               74-248
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               75-248
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               86-248
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               59, 117
               

               Conread position:
               92-248
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               54, 75
               

               Conread position:
               548-711
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               548-712
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               81, 54
               

               Conread position:
               552-728
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               48, 66
               

               Conread position:
               552-730
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               169, 106
               

               Conread position:
               552-730
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               72, 0
               
Show alignments to all cow chromosomes.