Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8029M14.5 |
| Conread position: | 2-244 |
| Cow position: | chr19:439092-438852 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 144, 17 |
| Conread position: | 2-249 |
| Cow position: | chr19:3138284-3138532 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 143, 49 |
| Conread position: | 5-244 |
| Cow position: | chr19:7488663-7488901 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 5-245 |
| Cow position: | chr19:27052160-27051925 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 59, 32 |
| Conread position: | 5-248 |
| Cow position: | chr19:172561-172798 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 25, 47 |
| Conread position: | 5-248 |
| Cow position: | chr19:5729179-5729423 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 14, 47 |
| Conread position: | 5-248 |
| Cow position: | chr19:33873776-33874018 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 14, 47 |
| Conread position: | 5-248 |
| Cow position: | chr19:33941960-33942195 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 15, 55 |
| Conread position: | 5-248 |
| Cow position: | chr19:39185196-39184952 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 17, 47 |
| Conread position: | 5-248 |
| Cow position: | chr19:39390858-39391098 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 17, 40 |
| Conread position: | 5-249 |
| Cow position: | chr19:75897-75660 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 141, 12 |
| Conread position: | 6-248 |
| Cow position: | chr19:162749-162514 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 6-248 |
| Cow position: | chr19:893257-893014 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 13, 22 |
| Conread position: | 6-248 |
| Cow position: | chr19:28581310-28581067 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 180 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 13, 46 |
| Conread position: | 6-248 |
| Cow position: | chr19:39669158-39668919 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 139, 124 |
| Conread position: | 8-245 |
| Cow position: | chr19:32182727-32182498 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 137, 43 |
| Conread position: | 9-134 |
| Cow position: | chr19:48861638-48861516 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 9-248 |
| Cow position: | chr19:35385394-35385160 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 7, 14 |
| Conread position: | 10-248 |
| Cow position: | chr19:204312-204550 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 135, 17 |
| Conread position: | 11-234 |
| Cow position: | chr19:5208523-5208745 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 134, 17 |
| Conread position: | 11-245 |
| Cow position: | chr19:43144067-43144297 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 134, 17 |
| Conread position: | 11-248 |
| Cow position: | chr19:7342419-7342654 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 23, 71 |
| Conread position: | 11-248 |
| Cow position: | chr19:52151479-52151243 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 135, 15 |
| Conread position: | 11-249 |
| Cow position: | chr19:32211722-32211485 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 134, 17 |
| Conread position: | 14-248 |
| Cow position: | chr19:40852078-40851846 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 131, 13 |
| Conread position: | 32-248 |
| Cow position: | chr19:772967-773182 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 113, 15 |
| Conread position: | 32-248 |
| Cow position: | chr19:2274008-2273791 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 113, 19 |
| Conread position: | 32-248 |
| Cow position: | chr19:28593634-28593849 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 113, 138 |
| Conread position: | 58-264 |
| Cow position: | chr19:33444025-33443818 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 87, 11 |
| Conread position: | 59-197 |
| Cow position: | chr19:4386015-4386158 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 60-248 |
| Cow position: | chr19:38293-38483 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 76-241 |
| Cow position: | chr19:20105125-20105291 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 77-245 |
| Cow position: | chr19:136590-136423 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 68, 94 |
| Conread position: | 77-248 |
| Cow position: | chr19:168185-168013 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 97-248 |
| Cow position: | chr19:5901059-5900908 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 49, 61 |
| Conread position: | 428-541 |
| Cow position: | chr19:33717915-33718033 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 521-728 |
| Cow position: | chr19:14596691-14596887 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 548-715 |
| Cow position: | chr19:14348042-14348205 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 548-724 |
| Cow position: | chr19:21199168-21199339 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 42, 37 |
| Conread position: | 548-730 |
| Cow position: | chr19:36059967-36060149 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 173, 153 |
| Conread position: | 551-728 |
| Cow position: | chr19:13766128-13765954 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 169, 68 |
| Conread position: | 551-729 |
| Cow position: | chr19:6344106-6344275 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 24, 0 |
Show alignments to all cow chromosomes.