Cow genome map

Conread name: Ss1.1-Pig4-TMW8029M14.5

Conread position: 2-248
Cow position: chr20:29948802-29949050 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 179
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 17, 51

Conread position: 3-245
Cow position: chr20:37580386-37580625 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 160
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 32, 24

Conread position: 4-248
Cow position: chr20:13763211-13763455 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 174
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 143, 47

Conread position: 5-245
Cow position: chr20:23469359-23469118 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 175
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 14, 48

Conread position: 5-245
Cow position: chr20:30684627-30684868 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 172
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 14, 47

Conread position: 5-248
Cow position: chr20:5535244-5535486 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 176
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 14, 47

Conread position: 5-248
Cow position: chr20:12438454-12438213 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 176
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 15, 47

Conread position: 5-248
Cow position: chr20:15292317-15292555 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 185
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 14, 47

Conread position: 5-248
Cow position: chr20:23799192-23799435 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 178
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 14, 47

Conread position: 5-248
Cow position: chr20:25850684-25850441 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 182
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 14, 23

Conread position: 5-248
Cow position: chr20:27869504-27869751 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 177
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 14, 47

Conread position: 5-248
Cow position: chr20:28161077-28161319 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 172
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 17, 47

Conread position: 6-248
Cow position: chr20:8992914-8992671 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 170
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 24, 42

Conread position: 6-248
Cow position: chr20:35124802-35125047 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 179
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 8, 40

Conread position: 7-239
Cow position: chr20:8834893-8834658 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 164
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 39, 15

Conread position: 7-247
Cow position: chr20:15097566-15097329 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 176
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 138, 12

Conread position: 7-248
Cow position: chr20:21393904-21394145 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 165
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 139, 37

Conread position: 11-248
Cow position: chr20:10840395-10840161 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 177
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 134, 16

Conread position: 11-248
Cow position: chr20:38350986-38351220 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 180
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 59, 17

Conread position: 11-249
Cow position: chr20:823075-823312 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 173
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 135, 17

Conread position: 11-249
Cow position: chr20:25961411-25961648 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 176
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 134, 17

Conread position: 18-187
Cow position: chr20:10845801-10845630 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 127, 9

Conread position: 18-245
Cow position: chr20:8003905-8003681 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 33, 0

Conread position: 18-248
Cow position: chr20:10855025-10854800 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 154
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 96

Conread position: 18-248
Cow position: chr20:21914648-21914878 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 128, 33

Conread position: 18-248
Cow position: chr20:28565275-28565043 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 167
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 101, 29

Conread position: 19-245
Cow position: chr20:13679723-13679495 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 156
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 10

Conread position: 23-231
Cow position: chr20:18324852-18324642 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 159
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 6, 186

Conread position: 40-248
Cow position: chr20:20754136-20753935 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 98, 0

Conread position: 47-248
Cow position: chr20:16179467-16179266 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 98, 188

Conread position: 59-242
Cow position: chr20:2790543-2790361 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 86, 105

Conread position: 59-248
Cow position: chr20:3271063-3271249 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 86, 137

Conread position: 59-248
Cow position: chr20:42905575-42905754 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 60-246
Cow position: chr20:19438294-19438471 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 85, 137

Conread position: 66-248
Cow position: chr20:7115119-7114936 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 80, 0

Conread position: 68-248
Cow position: chr20:8215888-8216067 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 77, 151

Conread position: 80-248
Cow position: chr20:22716948-22716782 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 65, 84

Conread position: 86-249
Cow position: chr20:22697656-22697818 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 59, 70

Conread position: 552-724
Cow position: chr20:33438893-33438714 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 625-730
Cow position: chr20:5061299-5061404 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.