Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8029M14.5
        

               Conread position:
               1-227
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               174
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               18, 58
               

               Conread position:
               1-248
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               145, 25
               

               Conread position:
               5-239
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               180
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               14, 47
               

               Conread position:
               5-239
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               14, 33
               

               Conread position:
               5-248
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               5-248
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               5-248
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               165, 128
               

               Conread position:
               5-248
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               14, 47
               

               Conread position:
               5-248
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               179
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               14, 47
               

               Conread position:
               5-248
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               14, 47
               

               Conread position:
               5-248
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               14, 47
               

               Conread position:
               5-248
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               182
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               14, 33
               

               Conread position:
               5-248
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               179
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               14, 47
               

               Conread position:
               5-248
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               14, 23
               

               Conread position:
               5-255
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               24, 120
               

               Conread position:
               6-243
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               137, 188
               

               Conread position:
               6-244
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               132, 158
               

               Conread position:
               6-248
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               61, 27
               

               Conread position:
               6-249
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               185
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               128, 83
               

               Conread position:
               7-248
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               22, 71
               

               Conread position:
               8-245
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               14, 141
               

               Conread position:
               8-245
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               9, 20
               

               Conread position:
               8-245
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               35, 17
               

               Conread position:
               8-248
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               6, 160
               

               Conread position:
               8-248
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 64
               

               Conread position:
               8-248
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               135, 116
               

               Conread position:
               8-248
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               8-249
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               186
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               15, 160
               

               Conread position:
               10-180
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               10-248
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               14, 165
               

               Conread position:
               11-245
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               134, 16
               

               Conread position:
               11-248
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               134, 15
               

               Conread position:
               11-248
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               134, 15
               

               Conread position:
               11-248
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               180
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               62, 17
               

               Conread position:
               11-248
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               134, 17
               

               Conread position:
               11-248
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               134, 26
               

               Conread position:
               11-248
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               134, 16
               

               Conread position:
               11-248
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               135, 26
               

               Conread position:
               11-248
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               136, 8
               

               Conread position:
               11-249
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               177
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               31, 17
               

               Conread position:
               11-249
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               135, 17
               

               Conread position:
               11-249
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               62, 15
               

               Conread position:
               11-249
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               178
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               50, 17
               

               Conread position:
               11-249
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               135, 15
               

               Conread position:
               13-197
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               27, 9
               

               Conread position:
               13-249
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               14-248
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               176
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               131, 38
               

               Conread position:
               18-248
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               127, 33
               

               Conread position:
               18-248
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               11, 145
               

               Conread position:
               20-248
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               21, 28
               

               Conread position:
               27-248
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               118, 156
               

               Conread position:
               32-239
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               32-248
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               113, 129
               

               Conread position:
               32-248
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               164
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               32-249
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               168
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               113, 139
               

               Conread position:
               37-249
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               162
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               47-249
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               95, 117
               

               Conread position:
               57-228
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               38, 149
               

               Conread position:
               59-243
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               59-248
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               87, 108
               

               Conread position:
               68-240
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               8, 157
               

               Conread position:
               100-248
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               46, 30
               

               Conread position:
               427-546
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               538-728
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               52, 40
               

               Conread position:
               548-713
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               548-723
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               42, 37
               

               Conread position:
               548-723
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               108, 37
               

               Conread position:
               548-726
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               551-723
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               48, 18
               

               Conread position:
               552-730
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               84, 0
               
Show alignments to all cow chromosomes.