Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8029M14.5 |
| Conread position: | 1-245 |
| Cow position: | chr25:9544356-9544594 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 15, 22 |
| Conread position: | 2-225 |
| Cow position: | chr25:23344613-23344384 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 2-248 |
| Cow position: | chr25:18274690-18274443 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 5-197 |
| Cow position: | chr25:33665384-33665193 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 141, 77 |
| Conread position: | 5-248 |
| Cow position: | chr25:12942405-12942161 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 179 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 14, 47 |
| Conread position: | 5-248 |
| Cow position: | chr25:18889720-18889476 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 47 |
| Conread position: | 5-248 |
| Cow position: | chr25:26279554-26279785 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 14, 47 |
| Conread position: | 6-153 |
| Cow position: | chr25:20495024-20495172 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 6-235 |
| Cow position: | chr25:18094498-18094724 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 132, 23 |
| Conread position: | 6-244 |
| Cow position: | chr25:17560340-17560103 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 137, 23 |
| Conread position: | 6-248 |
| Cow position: | chr25:8675214-8675454 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 181 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 139, 20 |
| Conread position: | 6-248 |
| Cow position: | chr25:27365154-27365394 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 31, 13 |
| Conread position: | 6-258 |
| Cow position: | chr25:3378047-3377806 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 18, 59 |
| Conread position: | 9-248 |
| Cow position: | chr25:18422323-18422567 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 27, 130 |
| Conread position: | 10-249 |
| Cow position: | chr25:18254679-18254440 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 9, 73 |
| Conread position: | 11-184 |
| Cow position: | chr25:35362133-35361961 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 134, 17 |
| Conread position: | 11-240 |
| Cow position: | chr25:18194802-18194574 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 134, 15 |
| Conread position: | 11-248 |
| Cow position: | chr25:6172199-6172435 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 134, 17 |
| Conread position: | 11-248 |
| Cow position: | chr25:13550734-13550498 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 135, 17 |
| Conread position: | 11-248 |
| Cow position: | chr25:17589258-17589021 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 131, 26 |
| Conread position: | 11-248 |
| Cow position: | chr25:32580261-32580496 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 135, 28 |
| Conread position: | 14-248 |
| Cow position: | chr25:13781335-13781569 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 131, 13 |
| Conread position: | 18-248 |
| Cow position: | chr25:24659562-24659791 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 127, 9 |
| Conread position: | 18-248 |
| Cow position: | chr25:34014179-34013947 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 54, 33 |
| Conread position: | 19-248 |
| Cow position: | chr25:34346707-34346479 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 22-244 |
| Cow position: | chr25:18303710-18303938 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 19, 145 |
| Conread position: | 59-245 |
| Cow position: | chr25:11932753-11932567 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 86, 105 |
| Conread position: | 59-248 |
| Cow position: | chr25:26879541-26879729 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 87, 22 |
| Conread position: | 60-248 |
| Cow position: | chr25:19917427-19917616 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 75-248 |
| Cow position: | chr25:27022205-27022036 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 65, 125 |
| Conread position: | 80-249 |
| Cow position: | chr25:20775557-20775387 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 81-248 |
| Cow position: | chr25:22147909-22148076 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 64, 83 |
| Conread position: | 90-248 |
| Cow position: | chr25:40918780-40918622 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 55, 116 |
| Conread position: | 548-726 |
| Cow position: | chr25:34169984-34170168 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 548-728 |
| Cow position: | chr25:7007950-7008121 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 548-728 |
| Cow position: | chr25:19478713-19478891 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 548-728 |
| Cow position: | chr25:28597572-28597403 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 548-728 |
| Cow position: | chr25:32907976-32908158 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 548-730 |
| Cow position: | chr25:30625045-30624864 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 173, 140 |
| Conread position: | 553-728 |
| Cow position: | chr25:32667228-32667057 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 67, 0 |
Show alignments to all cow chromosomes.