Cow genome map

Conread name: Ss1.1-Pig4-TMW8029M14.5

Conread position: 2-248
Cow position: chr28:3020457-3020210 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 170
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 20, 206

Conread position: 4-248
Cow position: chr28:12150600-12150844 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 172
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 15, 24

Conread position: 5-197
Cow position: chr28:14705374-14705181 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 14, 47

Conread position: 5-240
Cow position: chr28:2988944-2988710 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 165
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 55, 72

Conread position: 5-244
Cow position: chr28:5937773-5938016 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 178
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 14, 47

Conread position: 5-245
Cow position: chr28:5566442-5566687 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 182
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 14, 47

Conread position: 5-245
Cow position: chr28:5751408-5751171 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 172
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 14, 47

Conread position: 5-246
Cow position: chr28:10229931-10229681 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 190

Conread position: 5-248
Cow position: chr28:1505161-1505406 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 184
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 14, 48

Conread position: 5-248
Cow position: chr28:5114001-5113757 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 181
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 14, 47

Conread position: 5-248
Cow position: chr28:17667000-17666758 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 172
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 14, 47

Conread position: 5-248
Cow position: chr28:22260853-22260610 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 46

Conread position: 5-248
Cow position: chr28:29820031-29820276 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 178
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 14, 48

Conread position: 5-248
Cow position: chr28:32792083-32791837 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 186
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 14, 47

Conread position: 5-248
Cow position: chr28:33252609-33252846 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 176
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 14, 47

Conread position: 5-248
Cow position: chr28:34594276-34594519 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 177
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 14, 47

Conread position: 6-248
Cow position: chr28:1167583-1167341 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 180
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 13, 42

Conread position: 6-248
Cow position: chr28:5813307-5813550 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 167
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 30, 39

Conread position: 6-248
Cow position: chr28:7789655-7789412 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 173
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 8, 122

Conread position: 6-248
Cow position: chr28:10071583-10071823 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 174
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 162, 21

Conread position: 6-248
Cow position: chr28:10581686-10581444 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 184
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 13, 42

Conread position: 7-245
Cow position: chr28:7002291-7002527 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 172
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 138, 20

Conread position: 7-248
Cow position: chr28:5801287-5801538 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 193
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 48, 10

Conread position: 7-248
Cow position: chr28:7740782-7741020 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 169
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 138, 14

Conread position: 7-248
Cow position: chr28:17388783-17389023 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 174
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 138, 44

Conread position: 8-245
Cow position: chr28:12229892-12229663 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 161
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 215, 23

Conread position: 8-248
Cow position: chr28:10497717-10497481 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 170
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 12, 158

Conread position: 9-146
Cow position: chr28:29436563-29436428 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 114
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 124, 0

Conread position: 10-212
Cow position: chr28:10872499-10872702 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 142
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 9, 19

Conread position: 11-248
Cow position: chr28:1953428-1953664 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 175
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 134, 15

Conread position: 11-248
Cow position: chr28:14750845-14751080 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 171
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 135, 17

Conread position: 11-249
Cow position: chr28:485264-485027 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 176
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 135, 19

Conread position: 13-248
Cow position: chr28:6780038-6779802 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 176
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 12, 47

Conread position: 14-245
Cow position: chr28:1814560-1814331 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 172
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 131, 37

Conread position: 14-248
Cow position: chr28:782702-782932 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 168
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 131, 33

Conread position: 14-248
Cow position: chr28:14913821-14914057 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 169
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 17, 47

Conread position: 18-242
Cow position: chr28:13460281-13460504 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 127, 33

Conread position: 18-248
Cow position: chr28:2083905-2084133 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 173
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 152, 34

Conread position: 18-248
Cow position: chr28:26425940-26425710 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 171
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 127, 33

Conread position: 19-248
Cow position: chr28:1387093-1386866 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 166
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 6, 39

Conread position: 19-248
Cow position: chr28:12409916-12409687 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 170
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 127, 33

Conread position: 32-248
Cow position: chr28:22233082-22232865 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 146
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 113, 0

Conread position: 42-248
Cow position: chr28:2724596-2724388 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 159
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 9, 130

Conread position: 47-248
Cow position: chr28:7822590-7822792 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 98, 0

Conread position: 47-249
Cow position: chr28:6538929-6538726 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 98, 124

Conread position: 51-248
Cow position: chr28:3191904-3191715 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 9, 94

Conread position: 57-248
Cow position: chr28:18100872-18100682 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 136
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 91, 9

Conread position: 59-243
Cow position: chr28:24667961-24668138 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 86, 74

Conread position: 68-248
Cow position: chr28:18520086-18519909 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 75, 70

Conread position: 75-248
Cow position: chr28:8720931-8720757 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 68, 84

Conread position: 75-248
Cow position: chr28:24588450-24588626 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 66, 0

Conread position: 75-248
Cow position: chr28:24589212-24589388 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 66, 0

Conread position: 530-723
Cow position: chr28:21103801-21103617 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 548-726
Cow position: chr28:23641220-23641033 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 552-726
Cow position: chr28:4873296-4873118 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 127
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 38, 33

Conread position: 556-730
Cow position: chr28:12964620-12964792 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 35, 29

Show alignments to all cow chromosomes.