Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8029M14.5
        

               Conread position:
               1-248
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               144, 39
               

               Conread position:
               1-248
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               3-242
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               134, 15
               

               Conread position:
               4-248
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               177
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               15, 48
               

               Conread position:
               5-248
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               14, 23
               

               Conread position:
               5-248
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               180
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               15, 47
               

               Conread position:
               5-248
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               14, 47
               

               Conread position:
               5-248
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               14, 55
               

               Conread position:
               5-248
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               181
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               140, 22
               

               Conread position:
               5-248
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               14, 47
               

               Conread position:
               5-248
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               14, 47
               

               Conread position:
               5-248
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               14, 47
               

               Conread position:
               5-248
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               180
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               14, 47
               

               Conread position:
               5-248
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               185
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               14, 47
               

               Conread position:
               5-248
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               14, 23
               

               Conread position:
               6-239
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               6-245
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               181
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               139, 13
               

               Conread position:
               6-248
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               139, 34
               

               Conread position:
               6-248
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               177
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               142, 23
               

               Conread position:
               7-136
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               98
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               7-142
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               7-224
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               136, 19
               

               Conread position:
               8-248
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               138, 108
               

               Conread position:
               8-248
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               137, 56
               

               Conread position:
               8-248
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               31, 56
               

               Conread position:
               8-248
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               137, 43
               

               Conread position:
               11-195
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               134, 17
               

               Conread position:
               11-203
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               134, 17
               

               Conread position:
               11-242
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               134, 17
               

               Conread position:
               11-245
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               135, 17
               

               Conread position:
               11-245
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               50, 17
               

               Conread position:
               11-245
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               135, 17
               

               Conread position:
               11-245
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               31, 17
               

               Conread position:
               11-247
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               134, 15
               

               Conread position:
               11-248
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               15, 160
               

               Conread position:
               11-248
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               11-248
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               135, 17
               

               Conread position:
               11-248
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               177
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               135, 15
               

               Conread position:
               11-248
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               134, 17
               

               Conread position:
               11-249
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               135, 16
               

               Conread position:
               11-249
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               134, 16
               

               Conread position:
               11-249
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               132, 17
               

               Conread position:
               13-249
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               12, 37
               

               Conread position:
               13-249
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               176
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               14-192
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               14-245
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               128, 26
               

               Conread position:
               14-248
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               5, 16
               

               Conread position:
               14-248
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               131, 38
               

               Conread position:
               14-248
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               131, 38
               

               Conread position:
               14-248
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               131, 111
               

               Conread position:
               14-248
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               131, 13
               

               Conread position:
               14-248
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               15-248
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 218
               

               Conread position:
               18-246
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               127, 26
               

               Conread position:
               18-248
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               127, 9
               

               Conread position:
               20-248
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               20-249
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               13, 167
               

               Conread position:
               31-248
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               114, 204
               

               Conread position:
               32-248
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               95, 19
               

               Conread position:
               32-249
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               165
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               114, 131
               

               Conread position:
               47-246
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               98, 86
               

               Conread position:
               59-245
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               83, 105
               

               Conread position:
               59-248
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               59-249
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               86, 93
               

               Conread position:
               60-244
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               60-249
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               151
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               85, 104
               

               Conread position:
               61-248
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               62-248
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               83, 93
               

               Conread position:
               65-249
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               66-243
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               79, 90
               

               Conread position:
               66-248
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               36, 13
               

               Conread position:
               68-248
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               68-248
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               72-249
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               74, 101
               

               Conread position:
               74-248
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               71, 90
               

               Conread position:
               74-248
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               69, 89
               

               Conread position:
               75-248
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               80-248
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               66, 20
               

               Conread position:
               86-248
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               60, 81
               

               Conread position:
               88-248
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               57, 50
               

               Conread position:
               89-248
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               91-248
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               54, 45
               

               Conread position:
               548-724
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               548-728
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               63, 0
               
Show alignments to all cow chromosomes.