Cow genome map

Conread name: Ss1.1-Pig4-TMW8029M14.5

Conread position: 1-248
Cow position: chr8:24874627-24874375 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 2-237
Cow position: chr8:38585818-38585584 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 97

Conread position: 2-238
Cow position: chr8:38577891-38577652 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 184
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 29, 141

Conread position: 2-247
Cow position: chr8:19188720-19188973 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 195
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 18, 42

Conread position: 3-192
Cow position: chr8:45692661-45692472 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 7, 25

Conread position: 3-243
Cow position: chr8:11564046-11564287 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 169
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 12, 21

Conread position: 4-248
Cow position: chr8:33588872-33589117 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 178
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 15, 48

Conread position: 5-245
Cow position: chr8:24419708-24419466 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 169
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 140, 157

Conread position: 5-246
Cow position: chr8:25522898-25523142 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 179
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 14, 47

Conread position: 5-248
Cow position: chr8:3856517-3856273 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 172
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 14, 41

Conread position: 5-248
Cow position: chr8:10743131-10742888 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 176
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 14, 23

Conread position: 5-248
Cow position: chr8:12449447-12449690 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 171
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 140, 46

Conread position: 5-248
Cow position: chr8:17311517-17311762 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 173
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 35, 49

Conread position: 5-248
Cow position: chr8:23771134-23771377 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 177
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 14, 46

Conread position: 5-248
Cow position: chr8:25776174-25775930 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 176
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 14, 47

Conread position: 5-248
Cow position: chr8:32319050-32318814 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 180
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 14, 47

Conread position: 5-248
Cow position: chr8:36636045-36635802 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 176
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 14, 47

Conread position: 5-248
Cow position: chr8:38390867-38391108 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 178
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 14, 43

Conread position: 5-248
Cow position: chr8:38606700-38606457 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 176
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 140, 199

Conread position: 5-248
Cow position: chr8:39195718-39195472 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 179
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 14, 47

Conread position: 5-248
Cow position: chr8:42484411-42484655 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 176
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 17, 47

Conread position: 5-248
Cow position: chr8:44244074-44243831 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 178
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 14, 23

Conread position: 5-248
Cow position: chr8:51667796-51667552 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 165
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 141, 0

Conread position: 5-248
Cow position: chr8:60060879-60061119 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 169
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 24, 47

Conread position: 5-248
Cow position: chr8:61034517-61034276 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 168
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 141, 16

Conread position: 5-249
Cow position: chr8:30891821-30891579 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 182
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 141, 23

Conread position: 6-245
Cow position: chr8:4686895-4687136 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 180
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 13, 48

Conread position: 6-248
Cow position: chr8:7161392-7161634 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 183
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 13, 46

Conread position: 6-248
Cow position: chr8:9133824-9133584 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 169
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 30, 189

Conread position: 6-248
Cow position: chr8:42419936-42419694 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 174
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 139, 76

Conread position: 6-248
Cow position: chr8:45160577-45160331 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 176
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 16, 168

Conread position: 7-231
Cow position: chr8:12717466-12717686 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 18, 151

Conread position: 7-248
Cow position: chr8:11969775-11969542 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 161
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 7-248
Cow position: chr8:46944416-46944171 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 174
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 138, 19

Conread position: 7-248
Cow position: chr8:49214930-49215177 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 181
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 64, 12

Conread position: 8-245
Cow position: chr8:8911009-8911245 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 174
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 138, 43

Conread position: 8-248
Cow position: chr8:12542943-12542713 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 165
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 157, 18

Conread position: 10-248
Cow position: chr8:11832200-11832446 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 175
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 30, 43

Conread position: 10-248
Cow position: chr8:25408229-25408467 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 178
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 136, 41

Conread position: 11-242
Cow position: chr8:27578902-27579127 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 166
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 135, 17

Conread position: 11-244
Cow position: chr8:47074768-47075001 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 162
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 22, 115

Conread position: 11-248
Cow position: chr8:1319545-1319780 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 173
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 134, 17

Conread position: 11-248
Cow position: chr8:6683947-6684183 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 174
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 134, 17

Conread position: 11-248
Cow position: chr8:9735747-9735983 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 178
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 134, 15

Conread position: 11-248
Cow position: chr8:15711916-15711680 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 174
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 134, 17

Conread position: 11-248
Cow position: chr8:32437580-32437348 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 174
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 15, 0

Conread position: 11-248
Cow position: chr8:37931591-37931827 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 176
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 134, 17

Conread position: 11-248
Cow position: chr8:45797815-45797579 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 174
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 134, 17

Conread position: 11-249
Cow position: chr8:1153807-1153572 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 175
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 31, 15

Conread position: 11-249
Cow position: chr8:2886251-2886487 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 171
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 134, 15

Conread position: 11-249
Cow position: chr8:6065268-6065031 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 177
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 31, 24

Conread position: 11-249
Cow position: chr8:8518083-8517846 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 175
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 134, 17

Conread position: 11-249
Cow position: chr8:34348178-34348415 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 171
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 131, 17

Conread position: 13-262
Cow position: chr8:9275512-9275761 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 168
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 119, 19

Conread position: 14-248
Cow position: chr8:19050985-19051219 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 167
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 131, 37

Conread position: 14-248
Cow position: chr8:19330245-19330478 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 165
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 131, 15

Conread position: 18-248
Cow position: chr8:5016694-5016924 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 33

Conread position: 18-248
Cow position: chr8:14591389-14591162 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 165
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 128, 33

Conread position: 18-248
Cow position: chr8:50994299-50994524 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 162
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 127, 9

Conread position: 20-245
Cow position: chr8:8229269-8229042 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 13, 153

Conread position: 20-248
Cow position: chr8:2170867-2170635 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 13, 147

Conread position: 20-256
Cow position: chr8:11802332-11802568 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 166
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 13, 138

Conread position: 27-248
Cow position: chr8:47661803-47661582 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 167
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 118, 20

Conread position: 32-249
Cow position: chr8:47069286-47069069 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 164
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 114, 34

Conread position: 47-248
Cow position: chr8:1348700-1348494 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 151
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 98, 150

Conread position: 47-248
Cow position: chr8:30487849-30487643 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 151
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 25, 151

Conread position: 47-248
Cow position: chr8:32631493-32631291 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 151
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 99, 0

Conread position: 47-249
Cow position: chr8:8556614-8556410 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 155
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 75, 0

Conread position: 48-245
Cow position: chr8:24915800-24915602 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 149
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 97, 0

Conread position: 56-245
Cow position: chr8:44694360-44694551 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 134
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 112

Conread position: 58-249
Cow position: chr8:47885574-47885765 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 88, 55

Conread position: 59-248
Cow position: chr8:42164260-42164072 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 89

Conread position: 59-248
Cow position: chr8:58186662-58186475 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 23, 17

Conread position: 60-248
Cow position: chr8:9275729-9275919 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 72, 113

Conread position: 60-248
Cow position: chr8:10748911-10749098 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 145
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 86, 74

Conread position: 60-248
Cow position: chr8:11821866-11822051 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 12, 17

Conread position: 60-248
Cow position: chr8:21158280-21158097 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 87, 43

Conread position: 62-248
Cow position: chr8:50930575-50930388 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 83, 0

Conread position: 67-248
Cow position: chr8:34108403-34108588 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 72, 55

Conread position: 68-248
Cow position: chr8:8401554-8401373 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 75, 0

Conread position: 68-248
Cow position: chr8:14928323-14928142 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 78, 0

Conread position: 75-246
Cow position: chr8:22571748-22571576 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 135
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 71, 0

Conread position: 76-248
Cow position: chr8:50288357-50288185 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 70, 82

Conread position: 86-248
Cow position: chr8:8315876-8315712 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 44, 78

Conread position: 87-248
Cow position: chr8:44663102-44662939 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 52, 76

Conread position: 94-237
Cow position: chr8:16086934-16087073 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 118
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 56, 38

Conread position: 113-243
Cow position: chr8:58296906-58296773 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 19

Conread position: 548-723
Cow position: chr8:11927179-11927347 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 101, 0

Conread position: 548-723
Cow position: chr8:43153639-43153464 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 548-730
Cow position: chr8:15182396-15182583 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 130
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 548-730
Cow position: chr8:46235746-46235923 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 167, 69

Conread position: 548-732
Cow position: chr8:19010786-19010606 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 130
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 82, 0

Conread position: 550-727
Cow position: chr8:45232602-45232781 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 87, 0

Conread position: 551-707
Cow position: chr8:46191004-46190838 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 554-728
Cow position: chr8:18170959-18170784 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 52, 78

Show alignments to all cow chromosomes.