Cow genome map

Conread name: Ss1.1-Pig4-TMW8029M14.5

Conread position: 1-248
Cow position: chrX:20697041-20696805 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 176
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 17, 26

Conread position: 1-248
Cow position: chrX:24112781-24112533 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 190
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 25, 105

Conread position: 2-166
Cow position: chrX:41888910-41888740 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 8, 142

Conread position: 2-238
Cow position: chrX:29853515-29853278 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 176
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 17, 50

Conread position: 2-248
Cow position: chrX:6282689-6282451 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 174
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 141, 53

Conread position: 2-248
Cow position: chrX:13417375-13417130 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 176
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 48, 155

Conread position: 4-245
Cow position: chrX:21304475-21304234 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 177
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 141, 24

Conread position: 4-248
Cow position: chrX:8454803-8455047 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 179
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 141, 24

Conread position: 5-239
Cow position: chrX:22488238-22488473 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 175
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 14, 47

Conread position: 5-239
Cow position: chrX:29285495-29285728 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 170
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 140, 202

Conread position: 5-244
Cow position: chrX:44387177-44387419 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 167
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 24, 205

Conread position: 5-246
Cow position: chrX:2012602-2012366 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 177
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 140, 52

Conread position: 5-248
Cow position: chrX:2536397-2536152 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 167
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 140, 154

Conread position: 5-248
Cow position: chrX:21222985-21223222 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 176
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 14, 47

Conread position: 5-248
Cow position: chrX:21829581-21829825 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 172
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 17, 47

Conread position: 5-248
Cow position: chrX:23041066-23040828 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 178
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 14, 47

Conread position: 5-248
Cow position: chrX:23277077-23277320 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 180
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 14, 24

Conread position: 5-248
Cow position: chrX:23391542-23391298 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 176
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 14, 47

Conread position: 5-248
Cow position: chrX:26758548-26758306 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 172
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 14, 23

Conread position: 5-248
Cow position: chrX:29096258-29096502 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 176
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 14, 47

Conread position: 5-248
Cow position: chrX:30183837-30183593 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 175
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 14, 47

Conread position: 5-248
Cow position: chrX:30232051-30231801 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 176
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 14, 47

Conread position: 6-139
Cow position: chrX:28872966-28872833 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 110
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 73, 57

Conread position: 6-248
Cow position: chrX:10417246-10416998 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 187

Conread position: 7-137
Cow position: chrX:29814910-29815042 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 115
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 39, 15

Conread position: 7-219
Cow position: chrX:28603398-28603190 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 37, 0

Conread position: 7-248
Cow position: chrX:7751954-7752193 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 174
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 32, 21

Conread position: 7-248
Cow position: chrX:12669803-12669559 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 171
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 138, 30

Conread position: 7-248
Cow position: chrX:15179377-15179131 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 186
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 35, 21

Conread position: 7-248
Cow position: chrX:29779429-29779197 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 179
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 102, 70

Conread position: 7-249
Cow position: chrX:6873019-6872778 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 176
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 139, 19

Conread position: 7-249
Cow position: chrX:31082027-31082271 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 168
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 131, 18

Conread position: 7-249
Cow position: chrX:32067102-32066867 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 176
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 139, 19

Conread position: 8-223
Cow position: chrX:27079054-27079264 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 28, 36

Conread position: 8-243
Cow position: chrX:6250372-6250136 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 150

Conread position: 8-248
Cow position: chrX:12478781-12479020 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 172
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 33, 13

Conread position: 8-248
Cow position: chrX:16699361-16699601 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 178
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 137, 43

Conread position: 9-248
Cow position: chrX:13053086-13053317 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 171
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 136, 82

Conread position: 9-249
Cow position: chrX:3421129-3420894 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 138, 19

Conread position: 10-248
Cow position: chrX:13413076-13412838 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 173
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 120, 19

Conread position: 11-164
Cow position: chrX:982696-982848 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 112
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 134, 17

Conread position: 11-209
Cow position: chrX:8670649-8670846 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 129, 17

Conread position: 11-236
Cow position: chrX:29947765-29947989 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 134, 15

Conread position: 11-237
Cow position: chrX:12654702-12654477 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 134, 17

Conread position: 11-245
Cow position: chrX:11433759-11433992 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 170
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 134, 17

Conread position: 11-245
Cow position: chrX:12280212-12279979 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 173
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 134, 17

Conread position: 11-245
Cow position: chrX:12353298-12353531 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 171
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 134, 17

Conread position: 11-246
Cow position: chrX:5323665-5323431 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 173
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 134, 28

Conread position: 11-248
Cow position: chrX:2101917-2102152 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 177
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 134, 17

Conread position: 11-248
Cow position: chrX:2604106-2604342 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 175
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 135, 15

Conread position: 11-248
Cow position: chrX:7093656-7093892 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 175
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 134, 15

Conread position: 11-248
Cow position: chrX:8479707-8479944 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 175
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 125, 17

Conread position: 11-248
Cow position: chrX:11464944-11464708 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 172
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 134, 17

Conread position: 11-248
Cow position: chrX:12343014-12343248 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 179
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 134, 17

Conread position: 11-248
Cow position: chrX:17478464-17478228 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 172
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 134, 17

Conread position: 11-248
Cow position: chrX:20315997-20315768 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 174
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 15, 0

Conread position: 11-248
Cow position: chrX:21340462-21340699 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 169
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 135, 15

Conread position: 11-248
Cow position: chrX:22525546-22525310 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 169
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 134, 15

Conread position: 11-248
Cow position: chrX:22619250-22619014 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 169
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 131, 15

Conread position: 11-248
Cow position: chrX:26400123-26399883 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 169
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 32, 0

Conread position: 11-248
Cow position: chrX:27426262-27426026 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 178
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 134, 17

Conread position: 11-248
Cow position: chrX:28585038-28585274 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 175
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 134, 17

Conread position: 11-248
Cow position: chrX:28634358-28634123 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 172
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 135, 15

Conread position: 11-248
Cow position: chrX:30055678-30055441 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 134, 16

Conread position: 11-248
Cow position: chrX:30173613-30173377 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 177
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 135, 17

Conread position: 11-248
Cow position: chrX:35529920-35530156 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 171
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 135, 14

Conread position: 11-249
Cow position: chrX:2562799-2562562 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 169
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 134, 17

Conread position: 11-249
Cow position: chrX:5863456-5863692 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 174
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 134, 16

Conread position: 11-249
Cow position: chrX:10531500-10531263 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 172
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 134, 19

Conread position: 11-249
Cow position: chrX:13076639-13076402 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 175
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 127, 17

Conread position: 11-249
Cow position: chrX:13097213-13096976 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 175
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 127, 17

Conread position: 11-249
Cow position: chrX:13398062-13397825 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 175
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 132, 17

Conread position: 11-249
Cow position: chrX:16812537-16812299 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 175
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 134, 17

Conread position: 11-249
Cow position: chrX:18219455-18219692 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 177
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 134, 17

Conread position: 11-249
Cow position: chrX:18659725-18659487 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 172
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 135, 21

Conread position: 11-249
Cow position: chrX:28758583-28758346 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 177
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 132, 17

Conread position: 11-249
Cow position: chrX:31493478-31493715 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 174
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 134, 17

Conread position: 11-249
Cow position: chrX:37812220-37812456 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 174
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 134, 15

Conread position: 11-249
Cow position: chrX:37849072-37849309 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 171
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 134, 21

Conread position: 12-248
Cow position: chrX:30011098-30011333 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 175
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 134, 23

Conread position: 13-184
Cow position: chrX:31187190-31187016 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 12, 159

Conread position: 13-248
Cow position: chrX:1833884-1834112 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 165
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 12, 64

Conread position: 13-248
Cow position: chrX:9125414-9125658 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 163
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 132, 19

Conread position: 13-248
Cow position: chrX:23070776-23071011 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 164
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 12, 28

Conread position: 13-248
Cow position: chrX:28562159-28561921 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 176
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 12, 186

Conread position: 13-248
Cow position: chrX:33214338-33214577 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 174
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 60, 15

Conread position: 13-249
Cow position: chrX:12803804-12803569 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 168
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 132, 15

Conread position: 14-183
Cow position: chrX:6885233-6885058 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 14-248
Cow position: chrX:29885051-29885287 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 165
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 87, 12

Conread position: 15-244
Cow position: chrX:40246814-40246584 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 130, 156

Conread position: 18-245
Cow position: chrX:320538-320761 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 158
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 125, 9

Conread position: 18-245
Cow position: chrX:2482566-2482338 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 170
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 127, 33

Conread position: 18-245
Cow position: chrX:26767127-26766901 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 128, 9

Conread position: 18-246
Cow position: chrX:26427577-26427346 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 174
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 121, 191

Conread position: 18-248
Cow position: chrX:970838-971069 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 167
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 58, 9

Conread position: 18-248
Cow position: chrX:15127171-15126942 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 171
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 129, 33

Conread position: 18-248
Cow position: chrX:26528047-26528275 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 166
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 127, 33

Conread position: 19-197
Cow position: chrX:18954453-18954275 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 126, 32

Conread position: 19-248
Cow position: chrX:24484340-24484116 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 94, 18

Conread position: 20-248
Cow position: chrX:14594836-14595065 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 170
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 126, 0

Conread position: 20-249
Cow position: chrX:20359984-20359756 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 164
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 125, 8

Conread position: 21-244
Cow position: chrX:5299152-5298927 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 22, 0

Conread position: 22-248
Cow position: chrX:23019396-23019624 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 155
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 11, 97

Conread position: 31-132
Cow position: chrX:2380721-2380820 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 88
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 32-244
Cow position: chrX:31198525-31198737 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 154
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 113, 19

Conread position: 32-248
Cow position: chrX:16363047-16362830 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 162
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 113, 0

Conread position: 32-248
Cow position: chrX:39563854-39563637 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 161
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 111, 0

Conread position: 38-248
Cow position: chrX:3376030-3375818 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 21, 0

Conread position: 47-245
Cow position: chrX:5336394-5336195 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 98, 0

Conread position: 47-245
Cow position: chrX:22611039-22611238 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 98, 0

Conread position: 47-246
Cow position: chrX:5394909-5394708 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 54, 0

Conread position: 47-248
Cow position: chrX:7030278-7030478 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 98, 109

Conread position: 47-248
Cow position: chrX:7481724-7481926 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 98, 0

Conread position: 48-248
Cow position: chrX:21490290-21490491 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 155
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 98, 124

Conread position: 59-248
Cow position: chrX:29950480-29950288 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 87, 0

Conread position: 60-245
Cow position: chrX:22130138-22129946 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 60-248
Cow position: chrX:24089506-24089694 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 82, 157

Conread position: 60-249
Cow position: chrX:15980845-15980655 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 86, 0

Conread position: 61-249
Cow position: chrX:8588284-8588473 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 84, 0

Conread position: 63-222
Cow position: chrX:11149209-11149049 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 82, 0

Conread position: 68-243
Cow position: chrX:22582613-22582434 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 6, 15

Conread position: 68-244
Cow position: chrX:21589087-21589264 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 125
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 78, 0

Conread position: 68-248
Cow position: chrX:1547094-1547275 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 78, 0

Conread position: 68-248
Cow position: chrX:30056773-30056954 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 77, 103

Conread position: 71-255
Cow position: chrX:19873952-19874129 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 144
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 74, 24

Conread position: 72-248
Cow position: chrX:20720107-20720284 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 74, 0

Conread position: 74-248
Cow position: chrX:5833312-5833137 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 69, 0

Conread position: 75-240
Cow position: chrX:16237903-16238069 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 71, 0

Conread position: 75-248
Cow position: chrX:12288274-12288100 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 70, 0

Conread position: 76-249
Cow position: chrX:9008459-9008633 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 137
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 67, 0

Conread position: 78-248
Cow position: chrX:27495052-27495218 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 68, 16

Conread position: 80-249
Cow position: chrX:29911300-29911130 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 65, 0

Conread position: 81-248
Cow position: chrX:3407688-3407519 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 120
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 82-248
Cow position: chrX:21579603-21579768 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 63, 104

Conread position: 86-245
Cow position: chrX:14786751-14786594 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 60, 16

Conread position: 88-249
Cow position: chrX:1942609-1942450 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 58, 37

Conread position: 92-248
Cow position: chrX:30711727-30711884 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 114
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 93-249
Cow position: chrX:41851055-41850898 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 114
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 100-248
Cow position: chrX:507186-507037 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 46, 72

Conread position: 125-249
Cow position: chrX:28871007-28870882 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 548-713
Cow position: chrX:616192-616022 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 42, 37

Conread position: 548-723
Cow position: chrX:40531976-40531799 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 109, 0

Conread position: 548-730
Cow position: chrX:31983518-31983343 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 173, 71

Conread position: 548-730
Cow position: chrX:34411913-34412082 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 551-727
Cow position: chrX:32821098-32821271 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 49, 43

Conread position: 551-728
Cow position: chrX:7695819-7695996 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 170, 58

Conread position: 552-712
Cow position: chrX:40269563-40269724 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 105, 124

Conread position: 552-713
Cow position: chrX:23498609-23498446 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 71, 140

Conread position: 552-728
Cow position: chrX:23182912-23182735 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 124
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 552-728
Cow position: chrX:40480801-40480614 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 56

Conread position: 552-729
Cow position: chrX:16348500-16348320 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 74, 57

Conread position: 552-730
Cow position: chrX:37062514-37062334 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 126
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 54, 176

Show alignments to all cow chromosomes.