Cow genome map

Conread name: Ss1.1-Pig4-TMW8029O14.5

Conread position: 1-97
Cow position: chr18:53872197-53872101 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-111
Cow position: chr18:44261372-44261263 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 1-141
Cow position: chr18:15172158-15172020 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 116
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 21, 0

Conread position: 1-141
Cow position: chr18:25972756-25972897 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 126, 0

Conread position: 1-141
Cow position: chr18:43430310-43430171 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 29, 0

Conread position: 1-143
Cow position: chr18:30607000-30606858 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 1-143
Cow position: chr18:37509272-37509131 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 108, 0

Conread position: 1-144
Cow position: chr18:16094189-16094046 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-144
Cow position: chr18:29044406-29044551 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 108, 0

Conread position: 1-148
Cow position: chr18:14479388-14479244 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 1-150
Cow position: chr18:32859718-32859867 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-150
Cow position: chr18:43285001-43285152 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 52, 0

Conread position: 1-151
Cow position: chr18:51653903-51653754 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 11, 0

Conread position: 1-152
Cow position: chr18:29797781-29797932 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 142

Conread position: 1-154
Cow position: chr18:6733659-6733811 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 60, 0

Conread position: 1-155
Cow position: chr18:5536276-5536123 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 60, 0

Conread position: 1-155
Cow position: chr18:5569845-5569694 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 145, 64

Conread position: 1-155
Cow position: chr18:6104098-6104253 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 25, 0

Conread position: 1-155
Cow position: chr18:6881951-6882105 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 126
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr18:9981924-9981770 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr18:10292035-10291881 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr18:11869791-11869637 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr18:13270214-13270060 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr18:14127982-14128134 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 56, 0

Conread position: 1-155
Cow position: chr18:17335436-17335585 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 1-155
Cow position: chr18:18215709-18215866 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 88, 0

Conread position: 1-155
Cow position: chr18:19310471-19310317 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr18:19355817-19355665 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 84, 0

Conread position: 1-155
Cow position: chr18:21175114-21174960 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr18:21811284-21811130 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr18:22182235-22182389 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr18:23659590-23659745 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 98, 0

Conread position: 1-155
Cow position: chr18:23688476-23688322 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr18:23701494-23701648 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr18:23802327-23802173 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr18:24037542-24037696 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr18:24212241-24212087 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr18:24413599-24413446 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 71, 0

Conread position: 1-155
Cow position: chr18:24619733-24619579 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr18:25354821-25354668 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 148, 0

Conread position: 1-155
Cow position: chr18:25923690-25923536 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr18:26243154-26243308 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr18:27994680-27994834 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr18:28968985-28969139 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 124
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr18:29071725-29071572 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 127, 0

Conread position: 1-155
Cow position: chr18:29240391-29240236 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 43, 0

Conread position: 1-155
Cow position: chr18:32164627-32164781 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr18:32436797-32436951 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr18:32656875-32656721 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr18:35444064-35444218 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr18:36511938-36511784 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 144, 149

Conread position: 1-155
Cow position: chr18:36776581-36776426 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 27, 0

Conread position: 1-155
Cow position: chr18:37583153-37583307 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr18:37732993-37732840 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 1-155
Cow position: chr18:40195417-40195263 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr18:47745057-47744903 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 113
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 145, 149

Conread position: 1-155
Cow position: chr18:50093140-50093294 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr18:50835081-50835237 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 87, 0

Conread position: 1-155
Cow position: chr18:51272809-51272963 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr18:51459537-51459691 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr18:51602361-51602515 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr18:51697950-51697796 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr18:52574419-52574266 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 96, 0

Conread position: 1-155
Cow position: chr18:52629954-52630107 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 96, 0

Conread position: 1-155
Cow position: chr18:52656111-52655957 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr18:54033022-54032868 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr18:54065769-54065916 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 9, 0

Conread position: 1-155
Cow position: chr18:55554555-55554401 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-156
Cow position: chr18:13508759-13508903 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 1-156
Cow position: chr18:27990061-27989906 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-156
Cow position: chr18:33522531-33522376 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 1-156
Cow position: chr18:38158238-38158393 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 124
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 1-160
Cow position: chr18:41237843-41237688 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 138, 0

Conread position: 1-173
Cow position: chr18:28928291-28928456 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 1-173
Cow position: chr18:33271941-33271771 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 1-174
Cow position: chr18:603160-603332 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 156, 0

Conread position: 1-174
Cow position: chr18:36457562-36457391 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 137
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 71, 0

Conread position: 1-186
Cow position: chr18:29075197-29075013 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 156, 0

Conread position: 1-186
Cow position: chr18:35057330-35057144 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 158

Conread position: 1-186
Cow position: chr18:46874154-46874338 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 156, 0

Conread position: 4-143
Cow position: chr18:27539733-27539594 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 4-151
Cow position: chr18:36648706-36648557 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 123, 0

Conread position: 4-155
Cow position: chr18:16173312-16173462 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 118, 0

Conread position: 4-155
Cow position: chr18:29863303-29863454 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 5-155
Cow position: chr18:16471878-16472028 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 125
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 6-142
Cow position: chr18:3362363-3362232 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 7-143
Cow position: chr18:11778640-11778502 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 113
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 112, 18

Conread position: 7-151
Cow position: chr18:16463348-16463492 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 7-155
Cow position: chr18:5202787-5202639 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 7-155
Cow position: chr18:14419275-14419128 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 129, 0

Conread position: 7-155
Cow position: chr18:51484889-51484741 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 37, 71

Conread position: 7-156
Cow position: chr18:16463568-16463717 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 119
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 8-155
Cow position: chr18:22791125-22791262 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 10-155
Cow position: chr18:40484295-40484151 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 126, 0

Conread position: 10-187
Cow position: chr18:89467-89290 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 70

Conread position: 12-155
Cow position: chr18:29991724-29991865 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 134, 46

Conread position: 12-155
Cow position: chr18:51663470-51663326 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 118, 0

Conread position: 13-155
Cow position: chr18:2853498-2853640 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 118
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 14-155
Cow position: chr18:43621434-43621575 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 20-156
Cow position: chr18:35296453-35296317 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 22-155
Cow position: chr18:33753000-33752869 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 67, 0

Conread position: 27-186
Cow position: chr18:28930135-28930292 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 121, 0

Conread position: 40-155
Cow position: chr18:10890042-10889924 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 100
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 82, 0

Show alignments to all cow chromosomes.