Cow genome map

Conread name: Ss1.1-Pig4-TMW8029O14.5

Conread position: 1-109
Cow position: chr23:6593721-6593829 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 86
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 0, 0

Conread position: 1-126
Cow position: chr23:28987546-28987421 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-133
Cow position: chr23:16999647-16999516 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 1-137
Cow position: chr23:36028049-36028185 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-142
Cow position: chr23:26318487-26318346 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 118
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 1-142
Cow position: chr23:41015132-41014991 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-144
Cow position: chr23:6173815-6173952 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 53, 0

Conread position: 1-144
Cow position: chr23:27378123-27377978 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 113, 0

Conread position: 1-151
Cow position: chr23:11079587-11079437 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-151
Cow position: chr23:11781988-11781837 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 126, 0

Conread position: 1-151
Cow position: chr23:17846201-17846051 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-152
Cow position: chr23:20389818-20389968 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 141, 0

Conread position: 1-154
Cow position: chr23:37199310-37199464 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 79, 0

Conread position: 1-155
Cow position: chr23:771288-771442 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr23:954593-954747 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr23:2320741-2320894 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 1-155
Cow position: chr23:3285962-3285808 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr23:3302058-3301905 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 1-155
Cow position: chr23:3417125-3417279 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr23:4265413-4265566 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 53, 0

Conread position: 1-155
Cow position: chr23:4532494-4532648 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr23:4637152-4637305 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 60, 0

Conread position: 1-155
Cow position: chr23:5396377-5396531 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr23:5441121-5440967 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr23:5624369-5624523 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr23:7359664-7359510 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 127
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr23:10679630-10679784 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr23:10937099-10937253 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr23:11078481-11078333 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 74, 0

Conread position: 1-155
Cow position: chr23:11343700-11343546 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr23:11712464-11712618 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr23:14265550-14265396 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr23:14959748-14959900 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 53, 0

Conread position: 1-155
Cow position: chr23:15215631-15215785 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr23:20153018-20153172 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 122
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr23:20541024-20540870 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 123
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr23:21008401-21008555 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr23:21772706-21772861 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 1-155
Cow position: chr23:22144106-22144259 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 62, 0

Conread position: 1-155
Cow position: chr23:24119758-24119604 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr23:25351563-25351409 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr23:25357549-25357395 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr23:26684144-26683991 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 78, 0

Conread position: 1-155
Cow position: chr23:26828456-26828302 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr23:26840167-26840012 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 131
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 25, 0

Conread position: 1-155
Cow position: chr23:27402340-27402186 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr23:28083890-28084044 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 145, 149

Conread position: 1-155
Cow position: chr23:28221904-28221750 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr23:28306045-28305892 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 60, 0

Conread position: 1-155
Cow position: chr23:28915536-28915382 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 122
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr23:29042986-29042832 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr23:29625177-29625025 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 126
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 138, 0

Conread position: 1-155
Cow position: chr23:30623295-30623448 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 1-155
Cow position: chr23:30634391-30634545 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 123
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr23:31605631-31605477 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr23:31704098-31703944 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr23:32008173-32008327 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr23:34347077-34346923 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 113
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 36, 32

Conread position: 1-155
Cow position: chr23:38935011-38935165 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr23:39745067-39744913 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr23:41143644-41143490 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 1-156
Cow position: chr23:14839966-14840125 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 96, 152

Conread position: 1-179
Cow position: chr23:11070280-11070101 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 1-186
Cow position: chr23:345252-345436 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 156, 0

Conread position: 1-186
Cow position: chr23:29460046-29460232 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 146
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 23, 158

Conread position: 4-155
Cow position: chr23:2473100-2473258 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 83, 0

Conread position: 5-155
Cow position: chr23:21277435-21277585 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 89, 29

Conread position: 7-112
Cow position: chr23:12863800-12863905 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 7-112
Cow position: chr23:15180156-15180051 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 7-129
Cow position: chr23:29448051-29448173 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 7-144
Cow position: chr23:38584117-38583979 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 7-149
Cow position: chr23:2737419-2737277 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 7-151
Cow position: chr23:1048676-1048820 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 7-151
Cow position: chr23:3709602-3709458 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 7-155
Cow position: chr23:609926-609778 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 139, 143

Conread position: 7-155
Cow position: chr23:1959324-1959178 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 47, 0

Conread position: 7-155
Cow position: chr23:2409014-2409163 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 118, 0

Conread position: 7-155
Cow position: chr23:2761096-2760948 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 7-155
Cow position: chr23:2791565-2791716 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 80, 0

Conread position: 7-155
Cow position: chr23:4891893-4891745 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 7-155
Cow position: chr23:14216027-14216174 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 110, 0

Conread position: 7-155
Cow position: chr23:14970754-14970902 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 7-155
Cow position: chr23:15528784-15528636 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 7-155
Cow position: chr23:31772069-31772217 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 8-143
Cow position: chr23:1326116-1326253 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 8-151
Cow position: chr23:1399018-1399158 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 9, 0

Conread position: 9-142
Cow position: chr23:2180651-2180784 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 9-155
Cow position: chr23:4516736-4516590 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 10-155
Cow position: chr23:2023890-2024035 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 10-155
Cow position: chr23:3877948-3878093 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 18-155
Cow position: chr23:4436818-4436681 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 30-155
Cow position: chr23:14790658-14790533 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 30-155
Cow position: chr23:29441923-29442046 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 68, 0

Conread position: 40-148
Cow position: chr23:13536597-13536489 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.