Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8029O14.5 |
| Conread position: | 1-116 |
| Cow position: | chr26:3027330-3027445 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-120 |
| Cow position: | chr26:386929-386810 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-120 |
| Cow position: | chr26:21012369-21012252 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 1-128 |
| Cow position: | chr26:7559367-7559494 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-139 |
| Cow position: | chr26:4753298-4753160 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-141 |
| Cow position: | chr26:3833283-3833143 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-143 |
| Cow position: | chr26:35121993-35122135 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-144 |
| Cow position: | chr26:27987341-27987485 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 1-151 |
| Cow position: | chr26:13183559-13183410 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-151 |
| Cow position: | chr26:16781423-16781283 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 1-151 |
| Cow position: | chr26:21350755-21350603 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1-155 |
| Cow position: | chr26:46401-46556 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 1-155 |
| Cow position: | chr26:1088433-1088279 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-155 |
| Cow position: | chr26:1343046-1343198 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 1-155 |
| Cow position: | chr26:1346745-1346899 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-155 |
| Cow position: | chr26:1390231-1390079 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 55, 121 |
| Conread position: | 1-155 |
| Cow position: | chr26:1620904-1620746 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 1-155 |
| Cow position: | chr26:1885261-1885108 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 1-155 |
| Cow position: | chr26:1915591-1915437 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-155 |
| Cow position: | chr26:2348922-2349076 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-155 |
| Cow position: | chr26:3230717-3230563 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-155 |
| Cow position: | chr26:3537371-3537217 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-155 |
| Cow position: | chr26:3700220-3700065 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 50, 119 |
| Conread position: | 1-155 |
| Cow position: | chr26:3862829-3862981 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 1-155 |
| Cow position: | chr26:4548857-4548705 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1-155 |
| Cow position: | chr26:5679779-5679625 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-155 |
| Cow position: | chr26:7506465-7506618 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 1-155 |
| Cow position: | chr26:8084075-8083921 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-155 |
| Cow position: | chr26:8739168-8739321 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 1-155 |
| Cow position: | chr26:8810125-8809972 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 1-155 |
| Cow position: | chr26:8885093-8884939 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-155 |
| Cow position: | chr26:12585289-12585443 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-155 |
| Cow position: | chr26:14897250-14897096 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-155 |
| Cow position: | chr26:17327411-17327257 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-155 |
| Cow position: | chr26:17393646-17393800 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-155 |
| Cow position: | chr26:17429226-17429380 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-155 |
| Cow position: | chr26:18857369-18857215 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-155 |
| Cow position: | chr26:22691639-22691485 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-155 |
| Cow position: | chr26:23889661-23889505 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 1-155 |
| Cow position: | chr26:30594380-30594534 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-155 |
| Cow position: | chr26:34265213-34265059 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-155 |
| Cow position: | chr26:35191298-35191452 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-155 |
| Cow position: | chr26:35423748-35423594 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-155 |
| Cow position: | chr26:35560812-35560966 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-156 |
| Cow position: | chr26:7381790-7381634 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 1-156 |
| Cow position: | chr26:10699249-10699402 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-156 |
| Cow position: | chr26:22660026-22660182 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 1-156 |
| Cow position: | chr26:26238251-26238096 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-173 |
| Cow position: | chr26:2221753-2221923 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 149, 42 |
| Conread position: | 1-182 |
| Cow position: | chr26:9694547-9694727 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 157, 139 |
| Conread position: | 4-155 |
| Cow position: | chr26:4440508-4440658 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 4-155 |
| Cow position: | chr26:4729078-4729229 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-151 |
| Cow position: | chr26:14364990-14365136 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-116 |
| Cow position: | chr26:3564796-3564906 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 88 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 7-137 |
| Cow position: | chr26:9835711-9835580 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 7-155 |
| Cow position: | chr26:799286-799434 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 24, 20 |
| Conread position: | 7-155 |
| Cow position: | chr26:2201773-2201625 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 142, 134 |
| Conread position: | 7-155 |
| Cow position: | chr26:11262986-11262838 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 138, 143 |
| Conread position: | 7-155 |
| Cow position: | chr26:14488012-14488159 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 7-155 |
| Cow position: | chr26:21535605-21535457 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-155 |
| Cow position: | chr26:26286102-26285958 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 7-155 |
| Cow position: | chr26:28706815-28706963 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-155 |
| Cow position: | chr26:30586102-30586250 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 10-155 |
| Cow position: | chr26:9558640-9558785 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 14-144 |
| Cow position: | chr26:18934158-18934288 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 14-151 |
| Cow position: | chr26:12551752-12551890 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 14-152 |
| Cow position: | chr26:6321343-6321206 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 15-155 |
| Cow position: | chr26:18800924-18801063 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 19-155 |
| Cow position: | chr26:11269460-11269323 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 22-141 |
| Cow position: | chr26:14173302-14173184 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 23, 97 |
| Conread position: | 28-155 |
| Cow position: | chr26:18773042-18773169 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 31-154 |
| Cow position: | chr26:25393015-25392893 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 68, 0 |
Show alignments to all cow chromosomes.