Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8030A02.5
        

               Conread position:
               1-286
               

               Cow position:
               chr3:56128675-56128388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               345-485
               

               Cow position:
               chr3:56120333-56120193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               137
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               474-563
               

               Cow position:
               chr3:56115241-56115153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               90
               

               Alignm identity:
               85
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               562-640
               

               Cow position:
               chr3:56114494-56114416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               79
               

               Alignm identity:
               79
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               639-765
               

               Cow position:
               chr3:56108743-56108617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               125
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               759-1435
               

               Cow position:
               chr3:56083941-56083262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               683
               

               Alignm identity:
               605
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 210
               

               Conread position:
               1760-1882
               

               Cow position:
               chr3:56083110-56082988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               59, 39
               
Show alignments to all cow chromosomes.