Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8030B08.3 |
| Conread position: | 350-663 |
| Cow position: | chr10:23851428-23851122 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 267, 18 |
| Conread position: | 356-733 |
| Cow position: | chr10:3945588-3945223 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 12, 34 |
| Conread position: | 368-513 |
| Cow position: | chr10:33812514-33812372 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 131, 19 |
| Conread position: | 370-530 |
| Cow position: | chr10:58785184-58785342 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 370-660 |
| Cow position: | chr10:10514795-10514504 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 227, 19 |
| Conread position: | 370-740 |
| Cow position: | chr10:1942828-1942471 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 250 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 121, 20 |
| Conread position: | 371-545 |
| Cow position: | chr10:17411878-17412052 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 163, 21 |
| Conread position: | 371-625 |
| Cow position: | chr10:50094506-50094263 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 246, 18 |
| Conread position: | 372-506 |
| Cow position: | chr10:53471180-53471316 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 373-544 |
| Cow position: | chr10:19582821-19582654 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 373-683 |
| Cow position: | chr10:49861708-49861403 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 257, 15 |
| Conread position: | 373-740 |
| Cow position: | chr10:47555886-47555524 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 257 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 215, 14 |
| Conread position: | 379-610 |
| Cow position: | chr10:23570393-23570167 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 89, 8 |
| Conread position: | 380-626 |
| Cow position: | chr10:32622573-32622338 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 238, 9 |
| Conread position: | 384-625 |
| Cow position: | chr10:54184886-54184653 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 207, 5 |
| Conread position: | 387-631 |
| Cow position: | chr10:845825-845586 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 210, 39 |
| Conread position: | 388-506 |
| Cow position: | chr10:50775319-50775200 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 93 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 388-606 |
| Cow position: | chr10:8771748-8771528 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 144, 41 |
| Conread position: | 388-626 |
| Cow position: | chr10:9640425-9640653 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 19, 40 |
| Conread position: | 388-626 |
| Cow position: | chr10:69963365-69963124 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 115, 35 |
| Conread position: | 389-563 |
| Cow position: | chr10:982794-982963 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 389-570 |
| Cow position: | chr10:13416713-13416539 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 389-597 |
| Cow position: | chr10:16269055-16268851 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 18, 32 |
| Conread position: | 389-600 |
| Cow position: | chr10:17371037-17370829 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 58, 37 |
| Conread position: | 389-616 |
| Cow position: | chr10:55908527-55908748 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 389-628 |
| Cow position: | chr10:50579683-50579915 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 121, 69 |
| Conread position: | 389-631 |
| Cow position: | chr10:24841001-24840768 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 65, 123 |
| Conread position: | 389-631 |
| Cow position: | chr10:40877526-40877284 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 17, 78 |
| Conread position: | 389-663 |
| Cow position: | chr10:11187842-11187581 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 17, 37 |
| Conread position: | 389-734 |
| Cow position: | chr10:59534376-59534049 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 230 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 224, 121 |
| Conread position: | 390-626 |
| Cow position: | chr10:22419741-22419507 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 180 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 18, 141 |
| Conread position: | 397-584 |
| Cow position: | chr10:6636848-6636671 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 398-630 |
| Cow position: | chr10:20153026-20153239 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 400-739 |
| Cow position: | chr10:9559838-9559503 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 225 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 211, 27 |
| Conread position: | 403-736 |
| Cow position: | chr10:63249369-63249695 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 226 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 168, 24 |
| Conread position: | 403-739 |
| Cow position: | chr10:68935347-68935675 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 105, 24 |
| Conread position: | 407-746 |
| Cow position: | chr10:65095503-65095164 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 51, 125 |
| Conread position: | 408-749 |
| Cow position: | chr10:29709265-29709602 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 230 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 220, 123 |
| Conread position: | 409-626 |
| Cow position: | chr10:52987869-52987655 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 208, 122 |
| Conread position: | 409-663 |
| Cow position: | chr10:13086098-13085847 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 197, 122 |
| Conread position: | 412-739 |
| Cow position: | chr10:28703007-28702685 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 215 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 205, 54 |
| Conread position: | 415-626 |
| Cow position: | chr10:29726535-29726324 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 84, 50 |
| Conread position: | 421-660 |
| Cow position: | chr10:20963876-20964100 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 431-663 |
| Cow position: | chr10:67914888-67914651 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 186, 103 |
Show alignments to all cow chromosomes.