Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8030B08.3 |
| Conread position: | 73-339 |
| Cow position: | chr15:14109019-14108751 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 349-846 |
| Cow position: | chr15:14108191-14107698 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 289, 182 |
| Conread position: | 351-739 |
| Cow position: | chr15:38021846-38022227 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 257 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 266, 19 |
| Conread position: | 360-660 |
| Cow position: | chr15:38089614-38089312 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 219 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 150, 27 |
| Conread position: | 365-520 |
| Cow position: | chr15:40532889-40532740 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 145, 22 |
| Conread position: | 366-739 |
| Cow position: | chr15:37235703-37236060 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 247 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 192, 23 |
| Conread position: | 367-563 |
| Cow position: | chr15:27429123-27428934 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 52, 18 |
| Conread position: | 370-506 |
| Cow position: | chr15:38554194-38554062 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 371-739 |
| Cow position: | chr15:12053251-12052885 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 248 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 114, 19 |
| Conread position: | 373-636 |
| Cow position: | chr15:44672215-44672480 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 111, 16 |
| Conread position: | 373-737 |
| Cow position: | chr15:22131695-22132049 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 246 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 83, 16 |
| Conread position: | 378-627 |
| Cow position: | chr15:17386368-17386123 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 202, 11 |
| Conread position: | 378-628 |
| Cow position: | chr15:26910862-26910621 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 239, 16 |
| Conread position: | 378-678 |
| Cow position: | chr15:23294573-23294879 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 47, 8 |
| Conread position: | 379-664 |
| Cow position: | chr15:3898038-3897764 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 388-593 |
| Cow position: | chr15:37349653-37349854 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 39, 64 |
| Conread position: | 388-611 |
| Cow position: | chr15:6373517-6373295 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 183, 143 |
| Conread position: | 388-626 |
| Cow position: | chr15:43529969-43529735 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 19, 44 |
| Conread position: | 388-739 |
| Cow position: | chr15:15856935-15857268 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 244 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 185, 32 |
| Conread position: | 389-532 |
| Cow position: | chr15:1858425-1858568 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 389-574 |
| Cow position: | chr15:19318100-19318282 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 18, 39 |
| Conread position: | 389-615 |
| Cow position: | chr15:37063748-37063525 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 178, 38 |
| Conread position: | 389-616 |
| Cow position: | chr15:51909056-51908835 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 18, 143 |
| Conread position: | 389-622 |
| Cow position: | chr15:1692030-1692262 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 19, 78 |
| Conread position: | 389-626 |
| Cow position: | chr15:30262996-30262756 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 12, 78 |
| Conread position: | 389-664 |
| Cow position: | chr15:44875036-44875302 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 223, 49 |
| Conread position: | 390-566 |
| Cow position: | chr15:11321134-11320964 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 390-626 |
| Cow position: | chr15:22232105-22231874 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 117, 13 |
| Conread position: | 390-734 |
| Cow position: | chr15:37212836-37212489 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 232 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 142, 43 |
| Conread position: | 391-616 |
| Cow position: | chr15:42382497-42382275 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 391-625 |
| Cow position: | chr15:45232788-45232552 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 391-739 |
| Cow position: | chr15:17718928-17719284 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 5, 249 |
| Conread position: | 392-631 |
| Cow position: | chr15:12777036-12776799 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 15, 38 |
| Conread position: | 396-525 |
| Cow position: | chr15:6432738-6432867 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 397-732 |
| Cow position: | chr15:1577419-1577748 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 220, 122 |
| Conread position: | 427-739 |
| Cow position: | chr15:34089982-34090282 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 206 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 189, 16 |
| Conread position: | 442-631 |
| Cow position: | chr15:15947801-15947989 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 175, 89 |
Show alignments to all cow chromosomes.