Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8030B08.3 |
| Conread position: | 330-616 |
| Cow position: | chr17:30002487-30002202 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 24, 60 |
| Conread position: | 353-742 |
| Cow position: | chr17:43454044-43454423 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 260 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 139, 15 |
| Conread position: | 355-626 |
| Cow position: | chr17:26062345-26062076 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 155, 35 |
| Conread position: | 360-624 |
| Cow position: | chr17:7819496-7819751 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 11, 28 |
| Conread position: | 364-663 |
| Cow position: | chr17:14826102-14826396 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 209 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 253, 25 |
| Conread position: | 370-622 |
| Cow position: | chr17:17256615-17256380 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 188, 22 |
| Conread position: | 372-717 |
| Cow position: | chr17:31569418-31569088 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 197, 29 |
| Conread position: | 374-675 |
| Cow position: | chr17:32693658-32693360 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 58, 15 |
| Conread position: | 378-616 |
| Cow position: | chr17:30251525-30251759 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 115, 9 |
| Conread position: | 380-733 |
| Cow position: | chr17:25358420-25358077 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 94, 36 |
| Conread position: | 388-491 |
| Cow position: | chr17:3427796-3427898 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 85 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 388-626 |
| Cow position: | chr17:15738719-15738493 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 192, 78 |
| Conread position: | 389-594 |
| Cow position: | chr17:25916486-25916276 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 389-612 |
| Cow position: | chr17:28586301-28586526 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 127, 76 |
| Conread position: | 389-623 |
| Cow position: | chr17:19530326-19530561 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 175, 122 |
| Conread position: | 389-659 |
| Cow position: | chr17:8698635-8698907 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 15, 133 |
| Conread position: | 389-742 |
| Cow position: | chr17:19091867-19091517 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 241 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 103, 130 |
| Conread position: | 391-735 |
| Cow position: | chr17:2526380-2526037 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 242 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 115, 105 |
| Conread position: | 394-529 |
| Cow position: | chr17:20998362-20998497 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 394-585 |
| Cow position: | chr17:41244078-41244267 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 36, 14 |
| Conread position: | 394-737 |
| Cow position: | chr17:23429596-23429936 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 222, 72 |
| Conread position: | 395-739 |
| Cow position: | chr17:28115919-28116259 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 79, 8 |
| Conread position: | 409-645 |
| Cow position: | chr17:11275678-11275909 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 148, 118 |
| Conread position: | 419-520 |
| Cow position: | chr17:20310712-20310813 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 86 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 424-678 |
| Cow position: | chr17:20204755-20204498 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 109, 193 |
Show alignments to all cow chromosomes.